BLASTX nr result

ID: Coptis23_contig00008816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008816
         (1631 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277520.2| PREDICTED: xylose isomerase-like [Vitis vini...   812   0.0  
emb|CBI17768.3| unnamed protein product [Vitis vinifera]              812   0.0  
emb|CAN65150.1| hypothetical protein VITISV_037086 [Vitis vinifera]   808   0.0  
ref|XP_002532409.1| Xylose isomerase, putative [Ricinus communis...   806   0.0  
ref|XP_002324488.1| predicted protein [Populus trichocarpa] gi|2...   800   0.0  

>ref|XP_002277520.2| PREDICTED: xylose isomerase-like [Vitis vinifera]
          Length = 478

 Score =  812 bits (2097), Expect = 0.0
 Identities = 391/462 (84%), Positives = 417/462 (90%), Gaps = 1/462 (0%)
 Frame = -2

Query: 1594 AAISAAPQTCPAD-VSTGCSDETSGEWEGEFFPGISKIKYEGPSSKKILSYKWYNAEEEI 1418
            A I+++PQTCPAD VS+ C    S EWEGEFFPGI KIKYEGPSSK  LSYKWYNA+EEI
Sbjct: 19   AVIASSPQTCPADDVSSKCG--ASDEWEGEFFPGIPKIKYEGPSSKNPLSYKWYNADEEI 76

Query: 1417 LGKKMKDWFRFSVAFWHTFRGSGADPFGSQTKFWPWEDGTNSLAMAKRRMRANFEFVKKL 1238
            LGKKMKDW RFSVAFWHTFRG+G DPFG+ TKFWPWEDGT+SLAMAKRRMRANFEF++KL
Sbjct: 77   LGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKFWPWEDGTDSLAMAKRRMRANFEFIEKL 136

Query: 1237 GVDYWCFHDRDIAPDGKTLEESNANLDEVVALAKELQGKKIRPLWGTAQLFLHPRYMHGA 1058
            GVD WCFHDRDIAPDGKTLEE+NANLDEVVALAKELQGKKI PLWGTAQLF HPRYMHG 
Sbjct: 137  GVDLWCFHDRDIAPDGKTLEEANANLDEVVALAKELQGKKIHPLWGTAQLFHHPRYMHGG 196

Query: 1057 ATSSELXXXXXXXXXXXXAIEVTHYLGGENYVFWGGREGYQSLLNTDMKRELDHLGRFFQ 878
            ATSSE+            A+EVTHYLGGENYVFWGGREGYQ+LLNTDM RELDHL RF +
Sbjct: 197  ATSSEVAVYAYAAAQVKKAMEVTHYLGGENYVFWGGREGYQTLLNTDMGRELDHLARFLE 256

Query: 877  GAVAYKKKIGFNGTFLIEPKPQEPTKHQYDWDAATSIAFLQKYGLLEEFKLNIECNHATL 698
             A AYKKKIGFNGT LIEPKPQEPTKHQYDWDAAT+  FL+KYGL+ EFKLNIECNHATL
Sbjct: 257  AAAAYKKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRKYGLIGEFKLNIECNHATL 316

Query: 697  SGHSCHHELETARINGVLGNVDANTGDPQIGWDTDQFLTDIGEATMVMLSVVRNGGIAPG 518
            SGHSCHHELETAR+NG+LGN+DANTGDPQIGWDTDQFLTDI EATMVMLSVVRNGG+APG
Sbjct: 317  SGHSCHHELETARLNGLLGNIDANTGDPQIGWDTDQFLTDIAEATMVMLSVVRNGGLAPG 376

Query: 517  GFNFDAKLRRESTDVEDLFIAHISGMDTMARGLRNVAKLIEDGSLGELVRKRYQSFDTEI 338
            GFNFDAKLRRESTDVEDLFI+HISGMDT+ARGLRNVAKLIEDGSL  LVRKRYQSFDTEI
Sbjct: 377  GFNFDAKLRRESTDVEDLFISHISGMDTLARGLRNVAKLIEDGSLENLVRKRYQSFDTEI 436

Query: 337  GAEIEAGKVDFETLEKKVLEWGEPKVPSAKQELAEMIFQSAL 212
            GA+IEAGK DFE LEKK +EWGEPKVPSAKQELAEMIFQSAL
Sbjct: 437  GAQIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAL 478


>emb|CBI17768.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  812 bits (2097), Expect = 0.0
 Identities = 391/462 (84%), Positives = 417/462 (90%), Gaps = 1/462 (0%)
 Frame = -2

Query: 1594 AAISAAPQTCPAD-VSTGCSDETSGEWEGEFFPGISKIKYEGPSSKKILSYKWYNAEEEI 1418
            A I+++PQTCPAD VS+ C    S EWEGEFFPGI KIKYEGPSSK  LSYKWYNA+EEI
Sbjct: 67   AVIASSPQTCPADDVSSKCG--ASDEWEGEFFPGIPKIKYEGPSSKNPLSYKWYNADEEI 124

Query: 1417 LGKKMKDWFRFSVAFWHTFRGSGADPFGSQTKFWPWEDGTNSLAMAKRRMRANFEFVKKL 1238
            LGKKMKDW RFSVAFWHTFRG+G DPFG+ TKFWPWEDGT+SLAMAKRRMRANFEF++KL
Sbjct: 125  LGKKMKDWMRFSVAFWHTFRGTGGDPFGAPTKFWPWEDGTDSLAMAKRRMRANFEFIEKL 184

Query: 1237 GVDYWCFHDRDIAPDGKTLEESNANLDEVVALAKELQGKKIRPLWGTAQLFLHPRYMHGA 1058
            GVD WCFHDRDIAPDGKTLEE+NANLDEVVALAKELQGKKI PLWGTAQLF HPRYMHG 
Sbjct: 185  GVDLWCFHDRDIAPDGKTLEEANANLDEVVALAKELQGKKIHPLWGTAQLFHHPRYMHGG 244

Query: 1057 ATSSELXXXXXXXXXXXXAIEVTHYLGGENYVFWGGREGYQSLLNTDMKRELDHLGRFFQ 878
            ATSSE+            A+EVTHYLGGENYVFWGGREGYQ+LLNTDM RELDHL RF +
Sbjct: 245  ATSSEVAVYAYAAAQVKKAMEVTHYLGGENYVFWGGREGYQTLLNTDMGRELDHLARFLE 304

Query: 877  GAVAYKKKIGFNGTFLIEPKPQEPTKHQYDWDAATSIAFLQKYGLLEEFKLNIECNHATL 698
             A AYKKKIGFNGT LIEPKPQEPTKHQYDWDAAT+  FL+KYGL+ EFKLNIECNHATL
Sbjct: 305  AAAAYKKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRKYGLIGEFKLNIECNHATL 364

Query: 697  SGHSCHHELETARINGVLGNVDANTGDPQIGWDTDQFLTDIGEATMVMLSVVRNGGIAPG 518
            SGHSCHHELETAR+NG+LGN+DANTGDPQIGWDTDQFLTDI EATMVMLSVVRNGG+APG
Sbjct: 365  SGHSCHHELETARLNGLLGNIDANTGDPQIGWDTDQFLTDIAEATMVMLSVVRNGGLAPG 424

Query: 517  GFNFDAKLRRESTDVEDLFIAHISGMDTMARGLRNVAKLIEDGSLGELVRKRYQSFDTEI 338
            GFNFDAKLRRESTDVEDLFI+HISGMDT+ARGLRNVAKLIEDGSL  LVRKRYQSFDTEI
Sbjct: 425  GFNFDAKLRRESTDVEDLFISHISGMDTLARGLRNVAKLIEDGSLENLVRKRYQSFDTEI 484

Query: 337  GAEIEAGKVDFETLEKKVLEWGEPKVPSAKQELAEMIFQSAL 212
            GA+IEAGK DFE LEKK +EWGEPKVPSAKQELAEMIFQSAL
Sbjct: 485  GAQIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAL 526


>emb|CAN65150.1| hypothetical protein VITISV_037086 [Vitis vinifera]
          Length = 462

 Score =  808 bits (2086), Expect = 0.0
 Identities = 389/460 (84%), Positives = 415/460 (90%), Gaps = 1/460 (0%)
 Frame = -2

Query: 1588 ISAAPQTCPAD-VSTGCSDETSGEWEGEFFPGISKIKYEGPSSKKILSYKWYNAEEEILG 1412
            I+++PQTCPAD VS+ C    S EWEGEFFPGI KIKYEGPSSK  LSYKWYNA+EEILG
Sbjct: 5    IASSPQTCPADDVSSKCG--ASDEWEGEFFPGIPKIKYEGPSSKNPLSYKWYNADEEILG 62

Query: 1411 KKMKDWFRFSVAFWHTFRGSGADPFGSQTKFWPWEDGTNSLAMAKRRMRANFEFVKKLGV 1232
            KKMKDW RFSVAFWHTFRG+G DPFG+ TKFWPWEDGT+SLAMAKRRMRANFEF++KLGV
Sbjct: 63   KKMKDWMRFSVAFWHTFRGTGGDPFGAPTKFWPWEDGTDSLAMAKRRMRANFEFIEKLGV 122

Query: 1231 DYWCFHDRDIAPDGKTLEESNANLDEVVALAKELQGKKIRPLWGTAQLFLHPRYMHGAAT 1052
            D WCFHDRDIAPDGKTLEE+NANLDEVVALAKELQGKKI PLWGTAQLF HPRYMHG AT
Sbjct: 123  DLWCFHDRDIAPDGKTLEEANANLDEVVALAKELQGKKIHPLWGTAQLFHHPRYMHGGAT 182

Query: 1051 SSELXXXXXXXXXXXXAIEVTHYLGGENYVFWGGREGYQSLLNTDMKRELDHLGRFFQGA 872
            SSE+            A+EVTHYLGGENYVFWGGREGYQ+LLNTDM RELDHL RF + A
Sbjct: 183  SSEVAVYAYAAAQVKKAMEVTHYLGGENYVFWGGREGYQTLLNTDMGRELDHLARFLEAA 242

Query: 871  VAYKKKIGFNGTFLIEPKPQEPTKHQYDWDAATSIAFLQKYGLLEEFKLNIECNHATLSG 692
             AYKKKIGFNGT LIEPKPQEPTKHQYDWDAAT+  FL+KYGL+ EFKLNIECNHATLSG
Sbjct: 243  AAYKKKIGFNGTLLIEPKPQEPTKHQYDWDAATTANFLRKYGLIGEFKLNIECNHATLSG 302

Query: 691  HSCHHELETARINGVLGNVDANTGDPQIGWDTDQFLTDIGEATMVMLSVVRNGGIAPGGF 512
            HSCHHELETAR+NG+LGN+DANTGDPQIGWDTDQFLTDI EATMVMLSVVRNGG+APGGF
Sbjct: 303  HSCHHELETARLNGLLGNIDANTGDPQIGWDTDQFLTDIAEATMVMLSVVRNGGLAPGGF 362

Query: 511  NFDAKLRRESTDVEDLFIAHISGMDTMARGLRNVAKLIEDGSLGELVRKRYQSFDTEIGA 332
            NFDAKLRRESTDVEDLFI+HISGMDT+ARGLRNVAKLIED SL  LVRKRYQSFDTEIGA
Sbjct: 363  NFDAKLRRESTDVEDLFISHISGMDTLARGLRNVAKLIEDXSLENLVRKRYQSFDTEIGA 422

Query: 331  EIEAGKVDFETLEKKVLEWGEPKVPSAKQELAEMIFQSAL 212
            +IEAGK DFE LEKK +EWGEPKVPSAKQELAEMIFQSAL
Sbjct: 423  QIEAGKADFEMLEKKAMEWGEPKVPSAKQELAEMIFQSAL 462


>ref|XP_002532409.1| Xylose isomerase, putative [Ricinus communis]
            gi|223527883|gb|EEF29973.1| Xylose isomerase, putative
            [Ricinus communis]
          Length = 477

 Score =  806 bits (2082), Expect = 0.0
 Identities = 382/459 (83%), Positives = 415/459 (90%)
 Frame = -2

Query: 1588 ISAAPQTCPADVSTGCSDETSGEWEGEFFPGISKIKYEGPSSKKILSYKWYNAEEEILGK 1409
            I+A P TCPAD+   C+D  S EW+GEFFPGI KIKYEGPSSK  L+YKWYNAEEEILGK
Sbjct: 21   IAAGPPTCPADLGGKCAD--SDEWKGEFFPGIPKIKYEGPSSKNPLAYKWYNAEEEILGK 78

Query: 1408 KMKDWFRFSVAFWHTFRGSGADPFGSQTKFWPWEDGTNSLAMAKRRMRANFEFVKKLGVD 1229
            KMKDW RFS+AFWHTFRG+GADPFG+ TK+WPWEDGT+SLAMAKRRMRANFE + KLGVD
Sbjct: 79   KMKDWMRFSIAFWHTFRGTGADPFGAPTKYWPWEDGTDSLAMAKRRMRANFELLDKLGVD 138

Query: 1228 YWCFHDRDIAPDGKTLEESNANLDEVVALAKELQGKKIRPLWGTAQLFLHPRYMHGAATS 1049
             WCFHDRDIAP GKT+EESNANLDEVVALAKELQG KI PLWGTAQLFLHPRYMHGAATS
Sbjct: 139  RWCFHDRDIAPAGKTIEESNANLDEVVALAKELQGTKILPLWGTAQLFLHPRYMHGAATS 198

Query: 1048 SELXXXXXXXXXXXXAIEVTHYLGGENYVFWGGREGYQSLLNTDMKRELDHLGRFFQGAV 869
            S++            AIEVTHYLGGENYVFWGGREGYQSLLNTDM+RELDH+ RF + AV
Sbjct: 199  SDVGVYAYAAAQVKKAIEVTHYLGGENYVFWGGREGYQSLLNTDMERELDHMARFMEAAV 258

Query: 868  AYKKKIGFNGTFLIEPKPQEPTKHQYDWDAATSIAFLQKYGLLEEFKLNIECNHATLSGH 689
            AYKKKIGFNGT LIEPKPQEPTKHQYDWDAAT+  FL+KYGL++EFKLNIECNHATLSGH
Sbjct: 259  AYKKKIGFNGTLLIEPKPQEPTKHQYDWDAATAANFLRKYGLIDEFKLNIECNHATLSGH 318

Query: 688  SCHHELETARINGVLGNVDANTGDPQIGWDTDQFLTDIGEATMVMLSVVRNGGIAPGGFN 509
            SCHHELETARING+LGN+DANTGDPQIGWDTDQF+TDI EAT+VM+SV+RNGG+APGGFN
Sbjct: 319  SCHHELETARINGLLGNIDANTGDPQIGWDTDQFMTDIAEATLVMMSVIRNGGLAPGGFN 378

Query: 508  FDAKLRRESTDVEDLFIAHISGMDTMARGLRNVAKLIEDGSLGELVRKRYQSFDTEIGAE 329
            FDAKLRRESTDVED+FIAHI GMDT+ARGLRN AKLIEDGSL ELVRKRY+SFDTEIGA+
Sbjct: 379  FDAKLRRESTDVEDIFIAHIGGMDTLARGLRNAAKLIEDGSLAELVRKRYESFDTEIGAQ 438

Query: 328  IEAGKVDFETLEKKVLEWGEPKVPSAKQELAEMIFQSAL 212
            IEAGK DFE LEKK +EWGEPKVPSAKQELAEMIFQSAL
Sbjct: 439  IEAGKADFEMLEKKAIEWGEPKVPSAKQELAEMIFQSAL 477


>ref|XP_002324488.1| predicted protein [Populus trichocarpa] gi|222865922|gb|EEF03053.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score =  800 bits (2065), Expect = 0.0
 Identities = 380/458 (82%), Positives = 414/458 (90%)
 Frame = -2

Query: 1585 SAAPQTCPADVSTGCSDETSGEWEGEFFPGISKIKYEGPSSKKILSYKWYNAEEEILGKK 1406
            +A P TCPAD+   CSD  SGEWEGEFFPGI KIKYEGPSSK  L++KWYNAEEEILGKK
Sbjct: 22   AAGPPTCPADLGGKCSD--SGEWEGEFFPGIPKIKYEGPSSKNPLAFKWYNAEEEILGKK 79

Query: 1405 MKDWFRFSVAFWHTFRGSGADPFGSQTKFWPWEDGTNSLAMAKRRMRANFEFVKKLGVDY 1226
            MKDW RFS+AFWHTFRG+G DPFG+ TK+WPWEDGTNSLAMAKRRMRANFEF++K+GVD 
Sbjct: 80   MKDWMRFSIAFWHTFRGTGGDPFGAPTKYWPWEDGTNSLAMAKRRMRANFEFLEKIGVDR 139

Query: 1225 WCFHDRDIAPDGKTLEESNANLDEVVALAKELQGKKIRPLWGTAQLFLHPRYMHGAATSS 1046
            WCFHDRDIAPDG+TLEESN NLDEVVALAKELQG KIRPLWGTAQLF+HPRYMHG ATSS
Sbjct: 140  WCFHDRDIAPDGETLEESNKNLDEVVALAKELQGTKIRPLWGTAQLFMHPRYMHGGATSS 199

Query: 1045 ELXXXXXXXXXXXXAIEVTHYLGGENYVFWGGREGYQSLLNTDMKRELDHLGRFFQGAVA 866
            EL            A+EVTH LGGENYVFWGGREGYQSLLNTDM+RELDHL RF + AVA
Sbjct: 200  ELGVYAYAAAQVKKAMEVTHDLGGENYVFWGGREGYQSLLNTDMERELDHLARFCEAAVA 259

Query: 865  YKKKIGFNGTFLIEPKPQEPTKHQYDWDAATSIAFLQKYGLLEEFKLNIECNHATLSGHS 686
            YKKKIGF GT LIEPKPQEPTKHQYDWDAAT+  FL+KYGL+ EFKLNIECNHATLSGHS
Sbjct: 260  YKKKIGFIGTLLIEPKPQEPTKHQYDWDAATTANFLRKYGLIGEFKLNIECNHATLSGHS 319

Query: 685  CHHELETARINGVLGNVDANTGDPQIGWDTDQFLTDIGEATMVMLSVVRNGGIAPGGFNF 506
            CHHELETARING+LGN+DANTGDPQIGWDTDQF+TDI EATMVM+SV+RNGG+APGGFNF
Sbjct: 320  CHHELETARINGLLGNIDANTGDPQIGWDTDQFMTDISEATMVMISVIRNGGLAPGGFNF 379

Query: 505  DAKLRRESTDVEDLFIAHISGMDTMARGLRNVAKLIEDGSLGELVRKRYQSFDTEIGAEI 326
            DAKLRREST+VED+F+AHISGMDT+ARGLR+ AKLI+DGSL ELVRKRYQSFDTEIGA+I
Sbjct: 380  DAKLRRESTEVEDIFLAHISGMDTLARGLRSAAKLIQDGSLAELVRKRYQSFDTEIGAQI 439

Query: 325  EAGKVDFETLEKKVLEWGEPKVPSAKQELAEMIFQSAL 212
            EAGK DFETLEK  ++WGEPKVPSAKQELAEMIFQSAL
Sbjct: 440  EAGKGDFETLEKLAMKWGEPKVPSAKQELAEMIFQSAL 477


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