BLASTX nr result

ID: Coptis23_contig00008815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008815
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535957.1| PREDICTED: probable voltage-gated potassium ...   165   4e-39
ref|XP_002518142.1| potassium channel beta, putative [Ricinus co...   163   2e-38
ref|XP_003555713.1| PREDICTED: probable voltage-gated potassium ...   162   2e-38
ref|XP_002299286.1| predicted protein [Populus trichocarpa] gi|2...   161   4e-38
emb|CBI33350.3| unnamed protein product [Vitis vinifera]              161   6e-38

>ref|XP_003535957.1| PREDICTED: probable voltage-gated potassium channel subunit
           beta-like [Glycine max]
          Length = 328

 Score =  165 bits (417), Expect = 4e-39
 Identities = 84/90 (93%), Positives = 87/90 (96%)
 Frame = -1

Query: 485 ASRSLVDDVLKKVDGLKPIAEELGVPLSQLSIAWCAANPNVSSVITGATKESQIEENMKA 306
           ASRSLVDDVLKKVDGLKPIAEELGVPLSQL+IAWCAANPNVSSVI GATKESQI+ENMKA
Sbjct: 239 ASRSLVDDVLKKVDGLKPIAEELGVPLSQLAIAWCAANPNVSSVICGATKESQIQENMKA 298

Query: 305 LDVIPKLTPQVMEKIEAVVQSKPKRPESYR 216
           +DVIP LTP VMEKIEAVVQSKPKRPESYR
Sbjct: 299 IDVIPLLTPVVMEKIEAVVQSKPKRPESYR 328


>ref|XP_002518142.1| potassium channel beta, putative [Ricinus communis]
           gi|223542738|gb|EEF44275.1| potassium channel beta,
           putative [Ricinus communis]
          Length = 328

 Score =  163 bits (412), Expect = 2e-38
 Identities = 81/90 (90%), Positives = 88/90 (97%)
 Frame = -1

Query: 485 ASRSLVDDVLKKVDGLKPIAEELGVPLSQLSIAWCAANPNVSSVITGATKESQIEENMKA 306
           ASRSL+DDVLKKV+GLKPIA+ELGVPLSQL+IAWCAANPNVSSVITGATKESQI+ENMKA
Sbjct: 239 ASRSLIDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATKESQIQENMKA 298

Query: 305 LDVIPKLTPQVMEKIEAVVQSKPKRPESYR 216
           +DVIP LTP VMEKIEAVVQSKPKRP+SYR
Sbjct: 299 IDVIPLLTPAVMEKIEAVVQSKPKRPDSYR 328


>ref|XP_003555713.1| PREDICTED: probable voltage-gated potassium channel subunit
           beta-like [Glycine max]
          Length = 328

 Score =  162 bits (411), Expect = 2e-38
 Identities = 82/90 (91%), Positives = 87/90 (96%)
 Frame = -1

Query: 485 ASRSLVDDVLKKVDGLKPIAEELGVPLSQLSIAWCAANPNVSSVITGATKESQIEENMKA 306
           ASRSLVDDVL+KVDGLKPIA+ELGVPLSQL+IAWCAANPNVSSVI GATKESQI+ENMKA
Sbjct: 239 ASRSLVDDVLRKVDGLKPIADELGVPLSQLAIAWCAANPNVSSVICGATKESQIQENMKA 298

Query: 305 LDVIPKLTPQVMEKIEAVVQSKPKRPESYR 216
           +DVIP LTP VMEKIEAVVQSKPKRPESYR
Sbjct: 299 IDVIPLLTPVVMEKIEAVVQSKPKRPESYR 328


>ref|XP_002299286.1| predicted protein [Populus trichocarpa] gi|222846544|gb|EEE84091.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  161 bits (408), Expect = 4e-38
 Identities = 81/90 (90%), Positives = 88/90 (97%)
 Frame = -1

Query: 485 ASRSLVDDVLKKVDGLKPIAEELGVPLSQLSIAWCAANPNVSSVITGATKESQIEENMKA 306
           ASRSLVDDVLKKV+GLKPIA+ELGVPLSQL+IAWCAANPNVSSVITGATKESQI+ENMKA
Sbjct: 239 ASRSLVDDVLKKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATKESQIQENMKA 298

Query: 305 LDVIPKLTPQVMEKIEAVVQSKPKRPESYR 216
           +DVIP LTP VMEKIEAVVQSKPKRP+S+R
Sbjct: 299 VDVIPLLTPPVMEKIEAVVQSKPKRPDSFR 328


>emb|CBI33350.3| unnamed protein product [Vitis vinifera]
          Length = 192

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/90 (88%), Positives = 88/90 (97%)
 Frame = -1

Query: 485 ASRSLVDDVLKKVDGLKPIAEELGVPLSQLSIAWCAANPNVSSVITGATKESQIEENMKA 306
           ASRSLVDDVL+KV+GLKPIA+ELGVPLSQL+IAWCAANPNVSSVITGATKESQI+ENMKA
Sbjct: 103 ASRSLVDDVLRKVNGLKPIADELGVPLSQLAIAWCAANPNVSSVITGATKESQIQENMKA 162

Query: 305 LDVIPKLTPQVMEKIEAVVQSKPKRPESYR 216
           +DVIP LTP V+EKIEAVVQSKPKRP+SYR
Sbjct: 163 IDVIPLLTPTVLEKIEAVVQSKPKRPDSYR 192


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