BLASTX nr result

ID: Coptis23_contig00008811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008811
         (1735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35803.3| unnamed protein product [Vitis vinifera]              531   e-148
ref|XP_002516200.1| DNA binding protein, putative [Ricinus commu...   526   e-147
ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-contai...   508   e-141
ref|XP_002324130.1| predicted protein [Populus trichocarpa] gi|2...   506   e-141
ref|XP_003547888.1| PREDICTED: uncharacterized protein LOC100816...   491   e-136

>emb|CBI35803.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  531 bits (1368), Expect = e-148
 Identities = 283/438 (64%), Positives = 315/438 (71%), Gaps = 1/438 (0%)
 Frame = +2

Query: 425  SAPPPPLHAGAFSRGVVTMRCDFSTCSSCHVSLLVSGSAQTCFDDQXXXXXXXXXXXXXX 604
            SAPPPPL AG FSRGVVTMRCD STCSS H+SLLVSGSAQTCFDDQ              
Sbjct: 283  SAPPPPLQAGTFSRGVVTMRCDLSTCSSAHISLLVSGSAQTCFDDQL------------- 329

Query: 605  XXXXXXXXXXQQLENNIKNELLEKSQLVHALPICGESNRSLSVPRTSASIACGSTVYEVC 784
                        LENNIK E+ E+SQLVHALP    +   LS PR SASIACG+ V+EVC
Sbjct: 330  ------------LENNIKKEVTEQSQLVHALPYSEGNKPPLSEPRRSASIACGAAVFEVC 377

Query: 785  MKVPAWASQVLRQLATKISFRSLAALGIATIQGSCVASFDKDDTERLLFFSTRQERDLLQ 964
             KVPAWASQVLRQLA  +S+RSL ALGIA+IQG  VASF+KDD  RLLFF TRQ + +  
Sbjct: 378  AKVPAWASQVLRQLAPDVSYRSLVALGIASIQGLAVASFEKDDANRLLFFCTRQGKYIHP 437

Query: 965  HAI-PSSPPSWLRPPTPSRKRSVPQQKTKLHCVASEGKTGAADIYPDNGNGSGSFDFSDV 1141
            +   PS  PSWL+PP PSRKR  P Q T                     NG        +
Sbjct: 438  NNFTPSRLPSWLKPPPPSRKRVEPSQDTM--------------------NGV------TM 471

Query: 1142 PFLPVRKKLKVAAMRPIPHVLHHKILSFPVISEADKSNGGQLKANSLPFPVPKPKPLGSG 1321
            P LP  ++LKVAAMRPIPH+ HHK+L F  ISEAD  +GGQ+KAN    P  K   +GS 
Sbjct: 472  PLLPAGQRLKVAAMRPIPHIRHHKMLPFSGISEADGHDGGQVKANLSVPPPTKHSIVGST 531

Query: 1322 PFMHQKSLPNSYQAQQIISLNPLPLKKHGCGRCPIQFCSEEEFLRDVMQFLILRGHTRLV 1501
              MH+KS  +SYQA+QIISLNPLPLKKHGCGR PI+ CSEEEFL+DVMQFL LRGHTRL+
Sbjct: 532  SAMHRKSFSSSYQAKQIISLNPLPLKKHGCGRSPIRVCSEEEFLKDVMQFLNLRGHTRLI 591

Query: 1502 PQCGISEFPDAILNTKRLDLYNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTVTNKMTG 1681
            PQ G++EFPDAILN KRLDLYNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTVTN+MTG
Sbjct: 592  PQGGLAEFPDAILNAKRLDLYNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTVTNRMTG 651

Query: 1682 VGNTLKKHYEAYLLEYEL 1735
            VGNTLK+HYE YLLEYEL
Sbjct: 652  VGNTLKRHYETYLLEYEL 669


>ref|XP_002516200.1| DNA binding protein, putative [Ricinus communis]
            gi|223544686|gb|EEF46202.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 749

 Score =  526 bits (1354), Expect = e-147
 Identities = 281/440 (63%), Positives = 321/440 (72%), Gaps = 1/440 (0%)
 Frame = +2

Query: 419  KQSAPPPPLHAGAFSRGVVTMRCDFSTCSSCHVSLLVSGSAQTCFDDQXXXXXXXXXXXX 598
            + SAPPPPL AG FSRGVVTMRCD STCSS H+SLLVSGSAQ CF+DQ            
Sbjct: 281  RTSAPPPPLQAGTFSRGVVTMRCDLSTCSSAHISLLVSGSAQACFNDQL----------- 329

Query: 599  XXXXXXXXXXXXQQLENNIKNELLEKSQLVHALPICGESNRSLSVPRTSASIACGSTVYE 778
                          LEN+IKNEL+E SQLVHALP   ES    S PR SASI CG++V+E
Sbjct: 330  --------------LENHIKNELIENSQLVHALPSSEESKLLTSEPRKSASIGCGASVFE 375

Query: 779  VCMKVPAWASQVLRQLATKISFRSLAALGIATIQGSCVASFDKDDTERLLFFSTRQERDL 958
            VC+KVP+WASQVLRQLA  +S+RSL  LGIA+IQG  VASF+K+DTERLLFF TRQ ++L
Sbjct: 376  VCLKVPSWASQVLRQLAPDVSYRSLVMLGIASIQGLSVASFEKEDTERLLFFCTRQGKEL 435

Query: 959  L-QHAIPSSPPSWLRPPTPSRKRSVPQQKTKLHCVASEGKTGAADIYPDNGNGSGSFDFS 1135
               ++I   PP WL PP PSRKRS P ++TKL    S+G      +  +NG         
Sbjct: 436  YPNNSIIIKPPCWLIPPAPSRKRSEPCRETKLF--TSKG------LERENGGS------- 480

Query: 1136 DVPFLPVRKKLKVAAMRPIPHVLHHKILSFPVISEADKSNGGQLKANSLPFPVPKPKPLG 1315
                  V++KL VAAMRPIPH  HHK+L F   +E ++ +G Q K  SLP    K   +G
Sbjct: 481  ------VKQKLNVAAMRPIPHTRHHKMLPFSGFAEGERYDGDQGKP-SLPVAPAKHGVVG 533

Query: 1316 SGPFMHQKSLPNSYQAQQIISLNPLPLKKHGCGRCPIQFCSEEEFLRDVMQFLILRGHTR 1495
              P  H+KSL +SYQAQQIISLNPLPLKKHGCGR PIQ CSEEEFLRDVMQFLILRGHTR
Sbjct: 534  PAPVSHRKSLSSSYQAQQIISLNPLPLKKHGCGRAPIQACSEEEFLRDVMQFLILRGHTR 593

Query: 1496 LVPQCGISEFPDAILNTKRLDLYNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTVTNKM 1675
            LVPQ G++EFPDAILN KRLDL+NLYREVVSRGGFHVGNGINWKGQVFSKMRNHT+TN+M
Sbjct: 594  LVPQGGLAEFPDAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRM 653

Query: 1676 TGVGNTLKKHYEAYLLEYEL 1735
            TGVGNTLK+HYE YLLEYEL
Sbjct: 654  TGVGNTLKRHYETYLLEYEL 673


>ref|XP_002277324.1| PREDICTED: AT-rich interactive domain-containing protein 4 [Vitis
            vinifera] gi|297738501|emb|CBI27746.3| unnamed protein
            product [Vitis vinifera]
          Length = 739

 Score =  508 bits (1309), Expect = e-141
 Identities = 276/438 (63%), Positives = 312/438 (71%), Gaps = 1/438 (0%)
 Frame = +2

Query: 425  SAPPPPLHAGAFSRGVVTMRCDFSTCSSCHVSLLVSGSAQTCFDDQXXXXXXXXXXXXXX 604
            SAPPPPL AG FSRGVVTMRCD STCSS H+SLLVSGSAQTC +DQ              
Sbjct: 275  SAPPPPLQAGTFSRGVVTMRCDLSTCSSAHISLLVSGSAQTCLNDQL------------- 321

Query: 605  XXXXXXXXXXQQLENNIKNELLEKSQLVHALPICGESNRSLSVPRTSASIACGSTVYEVC 784
                        LE+ IKNEL+EKSQLVHA+P C ES  S S PR SASIACG++V+EV 
Sbjct: 322  ------------LESYIKNELIEKSQLVHAVPSCEESKLSSSEPRRSASIACGASVFEVR 369

Query: 785  MKVPAWASQVLRQLATKISFRSLAALGIATIQGSCVASFDKDDTERLLFFSTRQERDLLQ 964
            +KVP WASQVLRQLA  +S+RSL  LGIA+IQG  VASF+KDD +RLLFF TR  + L Q
Sbjct: 370  IKVPTWASQVLRQLAPDVSYRSLVTLGIASIQGLSVASFEKDDADRLLFFCTRHAKQLNQ 429

Query: 965  H-AIPSSPPSWLRPPTPSRKRSVPQQKTKLHCVASEGKTGAADIYPDNGNGSGSFDFSDV 1141
            + +I   PPSWL  P  SRKRS P  +TK               Y   G  +G       
Sbjct: 430  NNSILPRPPSWLIAPPASRKRSGPCHETK------------PSGYKVLGGVNGGV----- 472

Query: 1142 PFLPVRKKLKVAAMRPIPHVLHHKILSFPVISEADKSNGGQLKANSLPFPVPKPKPLGSG 1321
                +++K K+AAMRPIPH  +HK+L F  ISEA + +G Q K N    P    K  G+ 
Sbjct: 473  ----LQQKPKIAAMRPIPHTRNHKMLPFSGISEASRCDGDQAKGNLSVVPA---KHNGTT 525

Query: 1322 PFMHQKSLPNSYQAQQIISLNPLPLKKHGCGRCPIQFCSEEEFLRDVMQFLILRGHTRLV 1501
            P  H+K L +S+QAQQIISLNPLPLKKHGCGR PIQ CSEEEFLRDVMQFLILRGHTRLV
Sbjct: 526  PVTHRKLLSSSFQAQQIISLNPLPLKKHGCGRSPIQICSEEEFLRDVMQFLILRGHTRLV 585

Query: 1502 PQCGISEFPDAILNTKRLDLYNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTVTNKMTG 1681
            PQ G++EFPDAILN KRLDLYNLYREVVSRGGFHVGNGINWKGQVFSKMRNHT+TN+MTG
Sbjct: 586  PQGGLAEFPDAILNAKRLDLYNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRMTG 645

Query: 1682 VGNTLKKHYEAYLLEYEL 1735
            VGNTLK+HYE YLLEYEL
Sbjct: 646  VGNTLKRHYETYLLEYEL 663


>ref|XP_002324130.1| predicted protein [Populus trichocarpa] gi|222865564|gb|EEF02695.1|
            predicted protein [Populus trichocarpa]
          Length = 745

 Score =  506 bits (1303), Expect = e-141
 Identities = 273/440 (62%), Positives = 313/440 (71%), Gaps = 1/440 (0%)
 Frame = +2

Query: 419  KQSAPPPPLHAGAFSRGVVTMRCDFSTCSSCHVSLLVSGSAQTCFDDQXXXXXXXXXXXX 598
            + SAPPPPL AG FSRGVVTMRCD STCSS H+SLLVSGSAQ CF+DQ            
Sbjct: 279  RTSAPPPPLQAGTFSRGVVTMRCDLSTCSSAHISLLVSGSAQNCFNDQL----------- 327

Query: 599  XXXXXXXXXXXXQQLENNIKNELLEKSQLVHALPICGESNRSLSVPRTSASIACGSTVYE 778
                          LEN+IK+EL+E SQLVHA     ES    S PR SASIACG++V+E
Sbjct: 328  --------------LENHIKSELIENSQLVHASTSSDESKSPSSEPRKSASIACGASVFE 373

Query: 779  VCMKVPAWASQVLRQLATKISFRSLAALGIATIQGSCVASFDKDDTERLLFFSTRQERDL 958
            V MKVP WASQVLRQLA  +++RSL  LGIA+IQG  VASF+KDD +RLLFF T+Q +D 
Sbjct: 374  VSMKVPTWASQVLRQLAPDVTYRSLVMLGIASIQGLSVASFEKDDADRLLFFCTKQSKDP 433

Query: 959  L-QHAIPSSPPSWLRPPTPSRKRSVPQQKTKLHCVASEGKTGAADIYPDNGNGSGSFDFS 1135
              ++ + +  PSWL PP P RKR  P ++TK       G+ G            G+F   
Sbjct: 434  HPRNPVLTRHPSWLIPPAPCRKRYEPSRETKPLTFGCGGENG------------GNF--- 478

Query: 1136 DVPFLPVRKKLKVAAMRPIPHVLHHKILSFPVISEADKSNGGQLKANSLPFPVPKPKPLG 1315
                   ++KL VAAMRPIPH   HK+L F    EA++ +G Q K  SLP P PK   +G
Sbjct: 479  -------KQKLYVAAMRPIPHTRRHKMLPFSGFLEAERYDGEQTKP-SLP-PPPKHSVVG 529

Query: 1316 SGPFMHQKSLPNSYQAQQIISLNPLPLKKHGCGRCPIQFCSEEEFLRDVMQFLILRGHTR 1495
              P  H+KSL NSYQAQQIISLNPLPLKKHGCGR PIQ CSEEEFLRDVMQFLILRGH+R
Sbjct: 530  PAPVTHRKSLSNSYQAQQIISLNPLPLKKHGCGRSPIQACSEEEFLRDVMQFLILRGHSR 589

Query: 1496 LVPQCGISEFPDAILNTKRLDLYNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTVTNKM 1675
            LVPQ G++EFPDAILN KRLDL+NLYREVVSRGGFHVGNGINWKGQVFSKMRNHT+TN+M
Sbjct: 590  LVPQGGLAEFPDAILNAKRLDLFNLYREVVSRGGFHVGNGINWKGQVFSKMRNHTLTNRM 649

Query: 1676 TGVGNTLKKHYEAYLLEYEL 1735
            TGVGNTLK+HYE YLLEYEL
Sbjct: 650  TGVGNTLKRHYETYLLEYEL 669


>ref|XP_003547888.1| PREDICTED: uncharacterized protein LOC100816540 [Glycine max]
          Length = 782

 Score =  491 bits (1263), Expect = e-136
 Identities = 261/446 (58%), Positives = 321/446 (71%), Gaps = 7/446 (1%)
 Frame = +2

Query: 419  KQSAPPPPLHAGAFSRGVVTMRCDFSTCSSCHVSLLVSGSAQTCFDDQXXXXXXXXXXXX 598
            K SAPPPPL A AFSRGVVTMRCD STCSS H+SLLVSGSAQTCF+DQ            
Sbjct: 280  KFSAPPPPLQAAAFSRGVVTMRCDISTCSSAHISLLVSGSAQTCFNDQL----------- 328

Query: 599  XXXXXXXXXXXXQQLENNIKNELLEKSQLVHALPICGESNR-SLSVPRTSASIACGSTVY 775
                          LEN+IKNE++EKSQLVHA  +  E N+ ++  PR SASIACG++V+
Sbjct: 329  --------------LENHIKNEIIEKSQLVHA-QLNNEGNKENICEPRRSASIACGASVF 373

Query: 776  EVCMKVPAWASQVLRQLATKISFRSLAALGIATIQGSCVASFDKDDTERLLFFSTRQERD 955
            E+CMK+P WA Q+LRQLA ++S+RSL ALGIA+IQG  +ASF+KDD ERLLFF    E+D
Sbjct: 374  EICMKLPQWALQILRQLAPEVSYRSLVALGIASIQGLPIASFEKDDAERLLFFYQNCEKD 433

Query: 956  LL---QHAIPSSPPSWLRPPTPSRKRSVPQQKTK--LHCVASEGKTGAADIYPDNGNGSG 1120
                  + I SSPP WL+PP P+RKR  P+Q+    LH     G+ G   +  +  +   
Sbjct: 434  SCTNKNNIIFSSPPGWLKPPPPTRKRCEPRQEASPGLHEGVFAGQGGVCKLNEEEKDRKI 493

Query: 1121 SFDFSDVPFLPVRKKLKVAAMRPIPHVLHHKILSFPVISEADKSNGGQLKANSLPFPVP- 1297
                S +P  P R++LKV+AMRPIPH+  H++  F   SE D  +G Q++A  LP   P 
Sbjct: 494  VNGIS-MPLTPARQRLKVSAMRPIPHIRRHRMTPFCGPSETDGFDGTQVEA-ILPLVAPT 551

Query: 1298 KPKPLGSGPFMHQKSLPNSYQAQQIISLNPLPLKKHGCGRCPIQFCSEEEFLRDVMQFLI 1477
            K   +GS    H+KS  ++ Q++Q+ISLNPLPLKKHGCGR P+Q CSEEEFL+DVM+FLI
Sbjct: 552  KRTSIGSTSGTHRKSFSSAAQSKQVISLNPLPLKKHGCGRGPVQTCSEEEFLKDVMEFLI 611

Query: 1478 LRGHTRLVPQCGISEFPDAILNTKRLDLYNLYREVVSRGGFHVGNGINWKGQVFSKMRNH 1657
            LRGH RL+PQ G++EFPDAILN KRLDLYNLY+EVV+RGGFHVGNGINWKGQ+FSKMRN+
Sbjct: 612  LRGHNRLIPQGGLTEFPDAILNGKRLDLYNLYKEVVTRGGFHVGNGINWKGQIFSKMRNY 671

Query: 1658 TVTNKMTGVGNTLKKHYEAYLLEYEL 1735
            T TN+MTGVGNTLK+HYE YLLEYEL
Sbjct: 672  TTTNRMTGVGNTLKRHYETYLLEYEL 697


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