BLASTX nr result
ID: Coptis23_contig00008807
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00008807
(986 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncat... 164 5e-57
ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [... 162 4e-56
ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [... 161 9e-56
ref|XP_002301364.1| chromatin remodeling complex subunit [Populu... 162 1e-55
ref|XP_002511882.1| Chromo domain protein, putative [Ricinus com... 159 6e-55
>ref|XP_003627563.1| ATP-dependent helicase BRM [Medicago truncatula]
gi|355521585|gb|AET02039.1| ATP-dependent helicase BRM
[Medicago truncatula]
Length = 2175
Score = 164 bits (416), Expect(2) = 5e-57
Identities = 80/108 (74%), Positives = 94/108 (87%)
Frame = +2
Query: 164 KKLLEGHWVIRDGQTELQATKELPKYHKRMLREFSQRKDEDRTRRMEALKNNDVDRYREM 343
KKLLE HW IRD +T + + KYH+RMLREFS+ KD+DR++R+EALKNNDVDRYREM
Sbjct: 808 KKLLEAHWAIRDARTA--RNRGVGKYHERMLREFSKHKDDDRSKRLEALKNNDVDRYREM 865
Query: 344 LLEQQTSVPGDAAQRYSVLSSYLSQTEDYLHKLGGKITATKNQQEVVE 487
LLEQQTS+PGDAA+RY+VLSS+LSQTE+YLHKLG KITA KNQQEV E
Sbjct: 866 LLEQQTSIPGDAAERYTVLSSFLSQTEEYLHKLGSKITAAKNQQEVEE 913
Score = 84.0 bits (206), Expect(2) = 5e-57
Identities = 42/58 (72%), Positives = 47/58 (81%)
Frame = +3
Query: 3 EVDQQQQEIMAMPERQYRKFVREYERQRVDLSRQVHLSKKFMREKQLKSIFLWVKSFL 176
E+DQQQQEIMAMP+R YRKFVR ERQR++L RQV S+K REKQLKSIFLW K L
Sbjct: 754 EIDQQQQEIMAMPDRPYRKFVRLCERQRMELVRQVQASQKAAREKQLKSIFLWRKKLL 811
Score = 57.4 bits (137), Expect = 5e-06
Identities = 25/32 (78%), Positives = 28/32 (87%)
Frame = +1
Query: 889 IKRYYNLTHAVNEKVIRQPSMLRCGTLRDYQL 984
+ +YYNL HAVNE VIRQPS+LR GTLRDYQL
Sbjct: 961 VNKYYNLAHAVNEMVIRQPSLLRAGTLRDYQL 992
>ref|XP_003534554.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
Length = 2222
Score = 162 bits (411), Expect(2) = 4e-56
Identities = 80/108 (74%), Positives = 93/108 (86%)
Frame = +2
Query: 164 KKLLEGHWVIRDGQTELQATKELPKYHKRMLREFSQRKDEDRTRRMEALKNNDVDRYREM 343
KKLLE HW IRD +T + + KYH+RMLREFS+RKD+DR +RMEALKNNDVDRYREM
Sbjct: 813 KKLLETHWAIRDARTA--RNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVDRYREM 870
Query: 344 LLEQQTSVPGDAAQRYSVLSSYLSQTEDYLHKLGGKITATKNQQEVVE 487
LLEQQTS+ GDAA+RY+VLS++LSQTE+YLHKLG KITA KNQQEV E
Sbjct: 871 LLEQQTSIEGDAAERYAVLSTFLSQTEEYLHKLGSKITAAKNQQEVEE 918
Score = 82.8 bits (203), Expect(2) = 4e-56
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = +3
Query: 3 EVDQQQQEIMAMPERQYRKFVREYERQRVDLSRQVHLSKKFMREKQLKSIFLWVKSFL 176
E+DQQQQEIMAMP+R YRKFVR ERQR++L+RQV S++ +REKQLKSIF W K L
Sbjct: 759 EIDQQQQEIMAMPDRPYRKFVRLCERQRMELARQVQASQRALREKQLKSIFQWRKKLL 816
>ref|XP_003552402.1| PREDICTED: ATP-dependent helicase BRM-like [Glycine max]
Length = 2222
Score = 161 bits (408), Expect(2) = 9e-56
Identities = 79/108 (73%), Positives = 93/108 (86%)
Frame = +2
Query: 164 KKLLEGHWVIRDGQTELQATKELPKYHKRMLREFSQRKDEDRTRRMEALKNNDVDRYREM 343
KKLLE HW IRD +T + + KYH+RMLREFS+RKD+DR +RMEALKNNDVDRYREM
Sbjct: 818 KKLLETHWAIRDARTA--RNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVDRYREM 875
Query: 344 LLEQQTSVPGDAAQRYSVLSSYLSQTEDYLHKLGGKITATKNQQEVVE 487
LLEQQTS+ GDAA+RY+VLS++L+QTE+YLHKLG KITA KNQQEV E
Sbjct: 876 LLEQQTSIQGDAAERYAVLSTFLTQTEEYLHKLGSKITAAKNQQEVEE 923
Score = 82.8 bits (203), Expect(2) = 9e-56
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = +3
Query: 3 EVDQQQQEIMAMPERQYRKFVREYERQRVDLSRQVHLSKKFMREKQLKSIFLWVKSFL 176
E+DQQQQEIMAMP+R YRKFVR ERQR++L+RQV S++ +REKQLKSIF W K L
Sbjct: 764 EIDQQQQEIMAMPDRPYRKFVRLCERQRMELARQVQASQRALREKQLKSIFQWRKKLL 821
>ref|XP_002301364.1| chromatin remodeling complex subunit [Populus trichocarpa]
gi|222843090|gb|EEE80637.1| chromatin remodeling complex
subunit [Populus trichocarpa]
Length = 2222
Score = 162 bits (410), Expect(2) = 1e-55
Identities = 78/105 (74%), Positives = 93/105 (88%)
Frame = +2
Query: 164 KKLLEGHWVIRDGQTELQATKELPKYHKRMLREFSQRKDEDRTRRMEALKNNDVDRYREM 343
KKLLE HW IRD +T + + KYH+RMLREFS+RKD+DR +RMEALKNNDV+RYREM
Sbjct: 821 KKLLESHWAIRDSRTA--RNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREM 878
Query: 344 LLEQQTSVPGDAAQRYSVLSSYLSQTEDYLHKLGGKITATKNQQE 478
LLEQQTS+ GDA++RY+VLSS+L+QTE+YLHKLGGKITATKNQQE
Sbjct: 879 LLEQQTSISGDASERYAVLSSFLTQTEEYLHKLGGKITATKNQQE 923
Score = 81.3 bits (199), Expect(2) = 1e-55
Identities = 41/58 (70%), Positives = 47/58 (81%)
Frame = +3
Query: 3 EVDQQQQEIMAMPERQYRKFVREYERQRVDLSRQVHLSKKFMREKQLKSIFLWVKSFL 176
EVDQQQQEIMAMP+R YRKFVR ERQR++L+RQV S+K +REKQLKSI W K L
Sbjct: 767 EVDQQQQEIMAMPDRLYRKFVRLCERQRMELTRQVQASQKAIREKQLKSIMQWRKKLL 824
Score = 59.3 bits (142), Expect = 1e-06
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +1
Query: 895 RYYNLTHAVNEKVIRQPSMLRCGTLRDYQL 984
RYYNL HAVNE+VIRQPSMLR GTLRDYQL
Sbjct: 962 RYYNLAHAVNERVIRQPSMLRTGTLRDYQL 991
>ref|XP_002511882.1| Chromo domain protein, putative [Ricinus communis]
gi|223549062|gb|EEF50551.1| Chromo domain protein,
putative [Ricinus communis]
Length = 2248
Score = 159 bits (403), Expect(2) = 6e-55
Identities = 78/108 (72%), Positives = 93/108 (86%)
Frame = +2
Query: 164 KKLLEGHWVIRDGQTELQATKELPKYHKRMLREFSQRKDEDRTRRMEALKNNDVDRYREM 343
KKLLE HW IRD +T + + KYH+RMLREFS+RKD+DR +RMEALKNNDV+RYREM
Sbjct: 828 KKLLEAHWGIRDARTA--RNRGVAKYHERMLREFSKRKDDDRNKRMEALKNNDVERYREM 885
Query: 344 LLEQQTSVPGDAAQRYSVLSSYLSQTEDYLHKLGGKITATKNQQEVVE 487
LLEQQT++ GDAA+RY+VLSS+L+QTE+YLHKLG KITA KNQQEV E
Sbjct: 886 LLEQQTNIEGDAAERYAVLSSFLTQTEEYLHKLGSKITAAKNQQEVEE 933
Score = 82.0 bits (201), Expect(2) = 6e-55
Identities = 41/58 (70%), Positives = 47/58 (81%)
Frame = +3
Query: 3 EVDQQQQEIMAMPERQYRKFVREYERQRVDLSRQVHLSKKFMREKQLKSIFLWVKSFL 176
EVDQQQQEIMAMP+R YRKFVR ERQR++ +RQV S+K MR+KQLKSIF W K L
Sbjct: 774 EVDQQQQEIMAMPDRPYRKFVRLCERQRMEQARQVQASQKAMRDKQLKSIFQWRKKLL 831
Score = 57.8 bits (138), Expect = 4e-06
Identities = 25/32 (78%), Positives = 29/32 (90%)
Frame = +1
Query: 889 IKRYYNLTHAVNEKVIRQPSMLRCGTLRDYQL 984
+ +YY+L HAVNE+VIRQPSMLR GTLRDYQL
Sbjct: 981 VSKYYSLAHAVNERVIRQPSMLRAGTLRDYQL 1012