BLASTX nr result

ID: Coptis23_contig00008806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008806
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [...   132   3e-29
emb|CBI23232.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|2...   132   3e-29
gb|AFK35048.1| unknown [Lotus japonicus]                              126   2e-27
ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   126   2e-27

>ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera]
          Length = 447

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/109 (57%), Positives = 81/109 (74%)
 Frame = -1

Query: 353 ELSVTETQVRSNKSLVVATSHLKSRCADPNDPNSQYHQFKRERLLQAKEALTILQKHPNV 174
           EL + E +V++ K LV+ATSHL+S C  P   +  Y    +ER+ QAKEAL +L K+PNV
Sbjct: 275 ELCIAELEVQAGKPLVLATSHLESPCPAPPKWDQMY---SKERVDQAKEALNLLTKNPNV 331

Query: 173 IFCGDMNWNEKKDGEFPLPDGWVDAWTKLKGEEKGYTFDTKLNEMLNGN 27
           IF GDMNW+EK DG+FPLPDGWVDAW  L+  E G+T+DTK N+ML+GN
Sbjct: 332 IFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGN 380


>emb|CBI23232.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/109 (57%), Positives = 81/109 (74%)
 Frame = -1

Query: 353  ELSVTETQVRSNKSLVVATSHLKSRCADPNDPNSQYHQFKRERLLQAKEALTILQKHPNV 174
            EL + E +V++ K LV+ATSHL+S C  P   +  Y    +ER+ QAKEAL +L K+PNV
Sbjct: 789  ELCIAELEVQAGKPLVLATSHLESPCPAPPKWDQMY---SKERVDQAKEALNLLTKNPNV 845

Query: 173  IFCGDMNWNEKKDGEFPLPDGWVDAWTKLKGEEKGYTFDTKLNEMLNGN 27
            IF GDMNW+EK DG+FPLPDGWVDAW  L+  E G+T+DTK N+ML+GN
Sbjct: 846  IFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGN 894


>ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  132 bits (332), Expect = 3e-29
 Identities = 62/109 (56%), Positives = 81/109 (74%)
 Frame = -1

Query: 353 ELSVTETQVRSNKSLVVATSHLKSRCADPNDPNSQYHQFKRERLLQAKEALTILQKHPNV 174
           EL + E +V   KSLVVATSHL+S C  P   +     F +ER+ QAKEA+ +L+K+ NV
Sbjct: 250 ELCIAELEVPGKKSLVVATSHLESPCPAPPKWDQM---FSKERVDQAKEAINLLKKNSNV 306

Query: 173 IFCGDMNWNEKKDGEFPLPDGWVDAWTKLKGEEKGYTFDTKLNEMLNGN 27
           IFCGDMNW++K DG+FP PDGWVDAW +LK  + G+T+DTK N+ML+GN
Sbjct: 307 IFCGDMNWDDKLDGQFPFPDGWVDAWVELKPGDNGWTYDTKSNQMLSGN 355


>gb|AFK35048.1| unknown [Lotus japonicus]
          Length = 467

 Score =  126 bits (317), Expect = 2e-27
 Identities = 55/109 (50%), Positives = 81/109 (74%)
 Frame = -1

Query: 353 ELSVTETQVRSNKSLVVATSHLKSRCADPNDPNSQYHQFKRERLLQAKEALTILQKHPNV 174
           EL + E +  + KSLV+ATSHL+S C  P   +  Y    +ER+ QA EA+ +L+KHPNV
Sbjct: 295 ELCIAEVEAANGKSLVIATSHLESPCPGPPKWDQMY---SKERVEQANEAVNLLKKHPNV 351

Query: 173 IFCGDMNWNEKKDGEFPLPDGWVDAWTKLKGEEKGYTFDTKLNEMLNGN 27
           +F GDMNW++K DG++P  DGW+DAW++L+ ++ G+T+DTK N+ML+GN
Sbjct: 352 VFGGDMNWDDKLDGQYPSQDGWIDAWSQLRPDQSGWTYDTKSNQMLSGN 400


>ref|XP_003549776.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 2 [Glycine
           max]
          Length = 401

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/109 (51%), Positives = 80/109 (73%)
 Frame = -1

Query: 353 ELSVTETQVRSNKSLVVATSHLKSRCADPNDPNSQYHQFKRERLLQAKEALTILQKHPNV 174
           EL + E +  S K LV+ATSHL+S C  P   +  Y    +ER++QA EA+ +L+K P+V
Sbjct: 229 ELCIAEVEAASGKPLVIATSHLESPCPAPPKWDQMY---SKERVVQANEAINLLKKQPSV 285

Query: 173 IFCGDMNWNEKKDGEFPLPDGWVDAWTKLKGEEKGYTFDTKLNEMLNGN 27
           +F GDMNWN+++DG++PL DGWVDAW++L+  E G+T+DTK N+ML GN
Sbjct: 286 VFGGDMNWNDQQDGQYPLQDGWVDAWSQLRPNESGWTYDTKSNQMLTGN 334


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