BLASTX nr result

ID: Coptis23_contig00008805 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008805
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|2...   186   5e-45
ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [...   179   4e-43
emb|CBI23232.3| unnamed protein product [Vitis vinifera]              179   4e-43
gb|ADN34060.1| endonuclease/exonuclease/phosphatase family prote...   176   4e-42
ref|XP_002518464.1| hydrolase, putative [Ricinus communis] gi|22...   176   6e-42

>ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  186 bits (471), Expect = 5e-45
 Identities = 96/174 (55%), Positives = 121/174 (69%), Gaps = 9/174 (5%)
 Frame = +1

Query: 1   ELSVTETKVRSNKSLVVATSHLKSRCADPNVPNSQYHQFKRERLLQAKEALTILQKYPNV 180
           EL + E +V   KSLVVATSHL+S C     P      F +ER+ QAKEA+ +L+K  NV
Sbjct: 250 ELCIAELEVPGKKSLVVATSHLESPCP---APPKWDQMFSKERVDQAKEAINLLKKNSNV 306

Query: 181 IFCGDMNWEEK-DGEFPLPNGWVDAWTELKGEEKGYTFDAKSNDMLNGNYRNFRMRFDRI 357
           IFCGDMNW++K DG+FP P+GWVDAW ELK  + G+T+D KSN ML+GN R  + R DR 
Sbjct: 307 IFCGDMNWDDKLDGQFPFPDGWVDAWVELKPGDNGWTYDTKSNQMLSGN-RALQKRLDRF 365

Query: 358 LCNLKGFRLDNIEIIGKDRIPDVSYQKNKKM--------LPVLPSDHYGLLLTI 495
           +C+L  F++  I++IGKD IP +SY K KK+        LPVLPSDHYGLLLTI
Sbjct: 366 ICSLCDFKISKIDMIGKDAIPGLSYMKEKKVRKEVKMLELPVLPSDHYGLLLTI 419


>ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera]
          Length = 447

 Score =  179 bits (455), Expect = 4e-43
 Identities = 94/174 (54%), Positives = 121/174 (69%), Gaps = 9/174 (5%)
 Frame = +1

Query: 1   ELSVTETKVRSNKSLVVATSHLKSRCADPNVPNSQYHQFKRERLLQAKEALTILQKYPNV 180
           EL + E +V++ K LV+ATSHL+S C  P   +  Y    +ER+ QAKEAL +L K PNV
Sbjct: 275 ELCIAELEVQAGKPLVLATSHLESPCPAPPKWDQMY---SKERVDQAKEALNLLTKNPNV 331

Query: 181 IFCGDMNWEEK-DGEFPLPNGWVDAWTELKGEEKGYTFDAKSNDMLNGNYRNFRMRFDRI 357
           IF GDMNW+EK DG+FPLP+GWVDAW +L+  E G+T+D KSN ML+GN R  + R DR 
Sbjct: 332 IFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGN-RTLQKRLDRF 390

Query: 358 LCNLKGFRLDNIEIIGKDRIPDVSYQKNKK--------MLPVLPSDHYGLLLTI 495
           +C L  F++  I++IG + IP +SY K KK        +LPVLPSDHYGLLLTI
Sbjct: 391 MCRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 444


>emb|CBI23232.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  179 bits (455), Expect = 4e-43
 Identities = 94/174 (54%), Positives = 121/174 (69%), Gaps = 9/174 (5%)
 Frame = +1

Query: 1    ELSVTETKVRSNKSLVVATSHLKSRCADPNVPNSQYHQFKRERLLQAKEALTILQKYPNV 180
            EL + E +V++ K LV+ATSHL+S C  P   +  Y    +ER+ QAKEAL +L K PNV
Sbjct: 789  ELCIAELEVQAGKPLVLATSHLESPCPAPPKWDQMY---SKERVDQAKEALNLLTKNPNV 845

Query: 181  IFCGDMNWEEK-DGEFPLPNGWVDAWTELKGEEKGYTFDAKSNDMLNGNYRNFRMRFDRI 357
            IF GDMNW+EK DG+FPLP+GWVDAW +L+  E G+T+D KSN ML+GN R  + R DR 
Sbjct: 846  IFGGDMNWDEKSDGQFPLPDGWVDAWADLRPGENGWTYDTKSNQMLSGN-RTLQKRLDRF 904

Query: 358  LCNLKGFRLDNIEIIGKDRIPDVSYQKNKK--------MLPVLPSDHYGLLLTI 495
            +C L  F++  I++IG + IP +SY K KK        +LPVLPSDHYGLLLTI
Sbjct: 905  MCRLHDFKISKIDMIGMEPIPGLSYCKEKKVRKEMQQLVLPVLPSDHYGLLLTI 958


>gb|ADN34060.1| endonuclease/exonuclease/phosphatase family protein [Cucumis melo
           subsp. melo]
          Length = 481

 Score =  176 bits (446), Expect = 4e-42
 Identities = 90/174 (51%), Positives = 122/174 (70%), Gaps = 9/174 (5%)
 Frame = +1

Query: 1   ELSVTETKVRSNKSLVVATSHLKSRCADPNVPNSQYHQFKRERLLQAKEALTILQKYPNV 180
           EL +   +V++  SL VATSHL+S C  P   N  Y    +ER++QAK+A+  L++ PNV
Sbjct: 309 ELCIGNLEVQNGISLTVATSHLESPCPAPPKWNQMY---SKERVVQAKQAVDFLKETPNV 365

Query: 181 IFCGDMNWEEK-DGEFPLPNGWVDAWTELKGEEKGYTFDAKSNDMLNGNYRNFRMRFDRI 357
           IF GDMNW++K DG+FP P+GW+DAW EL+  E G+T+D KSN ML+GN R  + R DR 
Sbjct: 366 IFGGDMNWDDKLDGQFPFPDGWIDAWEELRPGENGWTYDTKSNKMLSGN-RTLQKRLDRF 424

Query: 358 LCNLKGFRLDNIEIIGKDRIPDVSYQKNKKM--------LPVLPSDHYGLLLTI 495
           +C L+ F++++IE+IG D IP ++Y K KK+        LPVLPSDHYGLLLTI
Sbjct: 425 ICKLQDFKVNSIEMIGTDSIPGLTYTKEKKVGKEMKTLELPVLPSDHYGLLLTI 478


>ref|XP_002518464.1| hydrolase, putative [Ricinus communis] gi|223542309|gb|EEF43851.1|
           hydrolase, putative [Ricinus communis]
          Length = 429

 Score =  176 bits (445), Expect = 6e-42
 Identities = 93/174 (53%), Positives = 118/174 (67%), Gaps = 9/174 (5%)
 Frame = +1

Query: 1   ELSVTETKVRSNKSLVVATSHLKSRCADPNVPNSQYHQFKRERLLQAKEALTILQKYPNV 180
           EL + E +V  +K LVVATSHL+S C     P +    F +ER+ QAKEA   L K PNV
Sbjct: 257 ELCIAELEVPHSKPLVVATSHLESPCP---APPTWDQMFSKERVDQAKEATNALSKNPNV 313

Query: 181 IFCGDMNWEEK-DGEFPLPNGWVDAWTELKGEEKGYTFDAKSNDMLNGNYRNFRMRFDRI 357
           IF GDMNW++K DG+FPLP GWVDAW EL+  E G+T+D K N ML+GN R  + R DR 
Sbjct: 314 IFGGDMNWDDKLDGQFPLPGGWVDAWAELRPGENGWTYDTKCNKMLSGN-RTLQKRLDRF 372

Query: 358 LCNLKGFRLDNIEIIGKDRIPDVSYQKNKKM--------LPVLPSDHYGLLLTI 495
           +C+L+ F++  I+ IGK+ IP +S+ K KK+        LPVLPSDHYGLLLTI
Sbjct: 373 VCSLRDFKISKIDTIGKEAIPGLSHIKEKKVRKEVKMLELPVLPSDHYGLLLTI 426


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