BLASTX nr result

ID: Coptis23_contig00008802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008802
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538267.1| PREDICTED: E3 ubiquitin-protein ligase KEG-l...   125   7e-27
ref|XP_002263469.1| PREDICTED: E3 ubiquitin-protein ligase KEG [...   125   7e-27
ref|XP_002513030.1| ankyrin-repeat containing protein, putative ...   125   7e-27
ref|XP_003598471.1| A subunit of NADH dehydrogenase [Medicago tr...   123   2e-26
ref|XP_003522897.1| PREDICTED: E3 ubiquitin-protein ligase KEG-l...   121   8e-26

>ref|XP_003538267.1| PREDICTED: E3 ubiquitin-protein ligase KEG-like [Glycine max]
          Length = 1637

 Score =  125 bits (313), Expect = 7e-27
 Identities = 72/157 (45%), Positives = 86/157 (54%), Gaps = 11/157 (7%)
 Frame = -1

Query: 449 MKVPCCSVCQNKYNEGERVPLLLQCGHGFCKDCLSKMFQXXXXXXXXXSCPRCRHVSLVG 270
           MK+PCCSVCQ +YNE ERVPLLLQCGHGFC++CLS+MF          +CPRCRHVS VG
Sbjct: 1   MKIPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFS--ASSDATLACPRCRHVSTVG 58

Query: 269 NSVSALRKNFAILSLIHSNELHNSNNGPXXXXXXXXXXXXXXXXXXXXXXXXXDV----- 105
           NSV ALRKN+A+L+L++S    N   G                          +      
Sbjct: 59  NSVQALRKNYAVLALLNSAAAANGGGGGRSSFDCDCTDDEDGDGGGEDEEEDDEKRRRNS 118

Query: 104 -EEQDYFRSGGKRCVIEL-----STHNDLRLVKRIDE 12
            E Q     GG   VIEL       HNDL+LV+RI E
Sbjct: 119 RESQASSSGGGCAPVIELGGGGGGAHNDLKLVQRIGE 155


>ref|XP_002263469.1| PREDICTED: E3 ubiquitin-protein ligase KEG [Vitis vinifera]
           gi|296087851|emb|CBI35107.3| unnamed protein product
           [Vitis vinifera]
          Length = 1631

 Score =  125 bits (313), Expect = 7e-27
 Identities = 73/159 (45%), Positives = 88/159 (55%), Gaps = 13/159 (8%)
 Frame = -1

Query: 449 MKVPCCSVCQNKYNEGERVPLLLQCGHGFCKDCLSKMFQXXXXXXXXXSCPRCRHVSLVG 270
           MK+PCC VCQ +YNE ERVPLLLQCGHGFCK+CLS++F          SCPRCRHVS VG
Sbjct: 1   MKIPCCLVCQTRYNEEERVPLLLQCGHGFCKECLSRLFS--ASPDTNLSCPRCRHVSSVG 58

Query: 269 NSVSALRKNFAILSLIHSNELHNSNNGPXXXXXXXXXXXXXXXXXXXXXXXXXDVEEQDY 90
           NSV ALRKN+ +L+LI S+   +S                             + EE+D 
Sbjct: 59  NSVQALRKNYGVLALIQSSSAPSS-----------AFDCDFTDEDEDNEDELLNEEEEDD 107

Query: 89  FRSGGKRC-------------VIELSTHNDLRLVKRIDE 12
                +RC             VIEL++H DLRLVKRI E
Sbjct: 108 ESHRRRRCSRGSYTSSSSCGPVIELASHQDLRLVKRIGE 146


>ref|XP_002513030.1| ankyrin-repeat containing protein, putative [Ricinus communis]
           gi|223548041|gb|EEF49533.1| ankyrin-repeat containing
           protein, putative [Ricinus communis]
          Length = 1617

 Score =  125 bits (313), Expect = 7e-27
 Identities = 70/152 (46%), Positives = 89/152 (58%), Gaps = 6/152 (3%)
 Frame = -1

Query: 449 MKVPCCSVCQNKYNEGERVPLLLQCGHGFCKDCLSKMFQXXXXXXXXXSCPRCRHVSLVG 270
           MKVPCCSVCQ +YNE ERVPLLLQCGHGFCK+CLS+MF          +CPRCRHVS+VG
Sbjct: 1   MKVPCCSVCQTRYNEEERVPLLLQCGHGFCKECLSRMFS--SSLDTTLACPRCRHVSVVG 58

Query: 269 NSVSALRKNFAILSLIHSNELHNSNNGPXXXXXXXXXXXXXXXXXXXXXXXXXDVE---E 99
           NSV+ALRKN+A+LSL+ +    + NN                           D E    
Sbjct: 59  NSVNALRKNYAVLSLLSAATSASPNNFDCDYTDDEEDDDDNISNNNDAKNDEDDEERCSR 118

Query: 98  QDYFRSGGKRC---VIELSTHNDLRLVKRIDE 12
             +  S G  C   VIE+  H++++L+K+I E
Sbjct: 119 GSHASSSGGACGGPVIEVGVHHEVKLLKKIGE 150


>ref|XP_003598471.1| A subunit of NADH dehydrogenase [Medicago truncatula]
           gi|355487519|gb|AES68722.1| A subunit of NADH
           dehydrogenase [Medicago truncatula]
          Length = 1819

 Score =  123 bits (309), Expect = 2e-26
 Identities = 72/153 (47%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
 Frame = -1

Query: 449 MKVPCCSVCQNKYNEGERVPLLLQCGHGFCKDCLSKMFQXXXXXXXXXSCPRCRHVSLVG 270
           MK+PCCSVCQ +YNE ERVPLLLQCGHGFCK+CLS+MF          +CPRCRHVS VG
Sbjct: 1   MKIPCCSVCQTRYNEEERVPLLLQCGHGFCKECLSRMFS--SSSDANLTCPRCRHVSTVG 58

Query: 269 NSVSALRKNFAILSLIHS-NELHNSNNGPXXXXXXXXXXXXXXXXXXXXXXXXXDVEEQD 93
           NSV ALRKN+A+LSLI S  +   +  G                           ++ + 
Sbjct: 59  NSVQALRKNYAVLSLILSAADSAAAAGGGGGGDCDFTDDDEDRDDSEVDDGDDQKLDCRK 118

Query: 92  YFR------SGGKRCVIELSTHNDLRLVKRIDE 12
             R      SGG   VIE+  H DL+LV+RI E
Sbjct: 119 NSRGSQASSSGGCAPVIEVGVHQDLKLVRRIGE 151


>ref|XP_003522897.1| PREDICTED: E3 ubiquitin-protein ligase KEG-like [Glycine max]
          Length = 1642

 Score =  121 bits (304), Expect = 8e-26
 Identities = 71/160 (44%), Positives = 86/160 (53%), Gaps = 14/160 (8%)
 Frame = -1

Query: 449 MKVPCCSVCQNKYNEGERVPLLLQCGHGFCKDCLSKMFQXXXXXXXXXSCPRCRHVSLVG 270
           MK+PCCSVCQ +YNE ERVPLLLQCGHGFC++CLS+MF          +CPRCRHVS VG
Sbjct: 1   MKIPCCSVCQTRYNEEERVPLLLQCGHGFCRECLSRMFS--ASSDATLACPRCRHVSTVG 58

Query: 269 NSVSALRKNFAILSLIHSNELHNSNNGPXXXXXXXXXXXXXXXXXXXXXXXXXDVEE--- 99
           NSV ALRKN+A+L+L+ S     +  G                          + +E   
Sbjct: 59  NSVQALRKNYAVLALLQSAAAAANGGGGGRSNFDCDYTDDEEDGDGGREDEDEEDDEKRR 118

Query: 98  ------QDYFRSGGKRCVIEL-----STHNDLRLVKRIDE 12
                 Q     GG   VIEL       HNDL+LV+RI E
Sbjct: 119 RNSRESQASSSGGGCAPVIELGGGGGGAHNDLKLVRRIGE 158


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