BLASTX nr result

ID: Coptis23_contig00008789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008789
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331053.1| predicted protein [Populus trichocarpa] gi|2...   161   8e-57
ref|XP_002262947.2| PREDICTED: protein OS-9-like [Vitis vinifera]     161   1e-56
emb|CBI25568.3| unnamed protein product [Vitis vinifera]              161   1e-56
ref|XP_002532311.1| conserved hypothetical protein [Ricinus comm...   168   5e-56
ref|XP_002325177.1| predicted protein [Populus trichocarpa] gi|2...   154   6e-54

>ref|XP_002331053.1| predicted protein [Populus trichocarpa] gi|222872983|gb|EEF10114.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  161 bits (407), Expect(2) = 8e-57
 Identities = 78/93 (83%), Positives = 84/93 (90%), Gaps = 2/93 (2%)
 Frame = -1

Query: 732 RQLHLEGDK--VVQEFILGVYDEEATTAFNQNLSDVSILKDPRSKDASQRYHAHQYTNGT 559
           RQ H+E +K  V+QEFILGVYDEEAT AFNQNLSD+S LKDPRSKDASQRYHAHQYTNGT
Sbjct: 137 RQFHVEDEKAKVIQEFILGVYDEEATAAFNQNLSDISTLKDPRSKDASQRYHAHQYTNGT 196

Query: 558 SCDLTNRPRETEVRFVCSEPNAVIASITELSTC 460
            CDLTN PRETEVRFVCSEP A+I+SITELSTC
Sbjct: 197 ICDLTNEPRETEVRFVCSEPRAMISSITELSTC 229



 Score = 85.9 bits (211), Expect(2) = 8e-57
 Identities = 36/55 (65%), Positives = 44/55 (80%)
 Frame = -2

Query: 398 LSTCKYALTVHSPMLCKHPMYKEQRPVWRTVNCNKIPKDSKPMGTEDGSSKDKQI 234
           LSTCKYALTVHSPMLCKHP+++E+RPVW T+NCN +PKD K    +   + DKQI
Sbjct: 226 LSTCKYALTVHSPMLCKHPLFQEERPVWHTINCNLLPKDYKEAKPDKVEADDKQI 280


>ref|XP_002262947.2| PREDICTED: protein OS-9-like [Vitis vinifera]
          Length = 299

 Score =  161 bits (408), Expect(3) = 1e-56
 Identities = 77/91 (84%), Positives = 83/91 (91%)
 Frame = -1

Query: 732 RQLHLEGDKVVQEFILGVYDEEATTAFNQNLSDVSILKDPRSKDASQRYHAHQYTNGTSC 553
           RQLH+E +KVVQEFILGVYD EAT AFNQNLSD+S  KDPRSKDASQRYHAHQ+TNGT C
Sbjct: 142 RQLHVEEEKVVQEFILGVYDAEATAAFNQNLSDISTQKDPRSKDASQRYHAHQFTNGTIC 201

Query: 552 DLTNRPRETEVRFVCSEPNAVIASITELSTC 460
           DLTN PRETEVRFVCSEP A+I+SITELSTC
Sbjct: 202 DLTNEPRETEVRFVCSEPRAMISSITELSTC 232



 Score = 82.4 bits (202), Expect(3) = 1e-56
 Identities = 35/56 (62%), Positives = 42/56 (75%)
 Frame = -2

Query: 398 LSTCKYALTVHSPMLCKHPMYKEQRPVWRTVNCNKIPKDSKPMGTEDGSSKDKQIT 231
           LSTCKYALT  SPMLCKHP ++E+RPVW  +NCN +PKD K    E+   K+KQIT
Sbjct: 229 LSTCKYALTFQSPMLCKHPWFQEERPVWHIINCNALPKDYKETKAEEAPFKNKQIT 284



 Score = 23.5 bits (49), Expect(3) = 1e-56
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 231 MVTDVKVPSSHDSEK 187
           M TDV+ PS+H SE+
Sbjct: 285 MATDVEYPSNHGSEQ 299


>emb|CBI25568.3| unnamed protein product [Vitis vinifera]
          Length = 296

 Score =  161 bits (408), Expect(3) = 1e-56
 Identities = 77/91 (84%), Positives = 83/91 (91%)
 Frame = -1

Query: 732 RQLHLEGDKVVQEFILGVYDEEATTAFNQNLSDVSILKDPRSKDASQRYHAHQYTNGTSC 553
           RQLH+E +KVVQEFILGVYD EAT AFNQNLSD+S  KDPRSKDASQRYHAHQ+TNGT C
Sbjct: 139 RQLHVEEEKVVQEFILGVYDAEATAAFNQNLSDISTQKDPRSKDASQRYHAHQFTNGTIC 198

Query: 552 DLTNRPRETEVRFVCSEPNAVIASITELSTC 460
           DLTN PRETEVRFVCSEP A+I+SITELSTC
Sbjct: 199 DLTNEPRETEVRFVCSEPRAMISSITELSTC 229



 Score = 82.4 bits (202), Expect(3) = 1e-56
 Identities = 35/56 (62%), Positives = 42/56 (75%)
 Frame = -2

Query: 398 LSTCKYALTVHSPMLCKHPMYKEQRPVWRTVNCNKIPKDSKPMGTEDGSSKDKQIT 231
           LSTCKYALT  SPMLCKHP ++E+RPVW  +NCN +PKD K    E+   K+KQIT
Sbjct: 226 LSTCKYALTFQSPMLCKHPWFQEERPVWHIINCNALPKDYKETKAEEAPFKNKQIT 281



 Score = 23.5 bits (49), Expect(3) = 1e-56
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -1

Query: 231 MVTDVKVPSSHDSEK 187
           M TDV+ PS+H SE+
Sbjct: 282 MATDVEYPSNHGSEQ 296


>ref|XP_002532311.1| conserved hypothetical protein [Ricinus communis]
           gi|223527980|gb|EEF30063.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 332

 Score =  168 bits (425), Expect(2) = 5e-56
 Identities = 79/91 (86%), Positives = 86/91 (94%)
 Frame = -1

Query: 732 RQLHLEGDKVVQEFILGVYDEEATTAFNQNLSDVSILKDPRSKDASQRYHAHQYTNGTSC 553
           RQ+HLE DK+VQEF+LGVYDEEAT AFNQNLSDVS +KDPRSKDASQRYHAHQYTNGT C
Sbjct: 175 RQVHLEDDKLVQEFVLGVYDEEATAAFNQNLSDVSTVKDPRSKDASQRYHAHQYTNGTMC 234

Query: 552 DLTNRPRETEVRFVCSEPNAVIASITELSTC 460
           DLTN+PRETEVRFVCSEP A+I+SITELSTC
Sbjct: 235 DLTNQPRETEVRFVCSEPRAMISSITELSTC 265



 Score = 76.3 bits (186), Expect(2) = 5e-56
 Identities = 32/55 (58%), Positives = 42/55 (76%)
 Frame = -2

Query: 398 LSTCKYALTVHSPMLCKHPMYKEQRPVWRTVNCNKIPKDSKPMGTEDGSSKDKQI 234
           LSTCKYALTV  PMLCKH +++E+RPVW T++CN +PKD +    E+  + DKQI
Sbjct: 262 LSTCKYALTVQVPMLCKHLLFQEERPVWHTIDCNALPKDYEETKAENDKTVDKQI 316


>ref|XP_002325177.1| predicted protein [Populus trichocarpa] gi|222866611|gb|EEF03742.1|
           predicted protein [Populus trichocarpa]
          Length = 282

 Score =  154 bits (389), Expect(2) = 6e-54
 Identities = 77/94 (81%), Positives = 83/94 (88%), Gaps = 3/94 (3%)
 Frame = -1

Query: 732 RQLHLEGDK--VVQEFILGVYDEEATTAFNQNLSDVSILKDPRSKDASQ-RYHAHQYTNG 562
           RQ H+E +K  VVQEFILGVYDEEAT AFNQNLSD+S LKDPRSKDASQ RYHAHQYTNG
Sbjct: 133 RQFHVEDEKEKVVQEFILGVYDEEATAAFNQNLSDISTLKDPRSKDASQSRYHAHQYTNG 192

Query: 561 TSCDLTNRPRETEVRFVCSEPNAVIASITELSTC 460
           T CDLTN PRETEVRFVCSEP A+I+S+ ELSTC
Sbjct: 193 TICDLTNEPRETEVRFVCSEPRAMISSVIELSTC 226



 Score = 83.2 bits (204), Expect(2) = 6e-54
 Identities = 34/55 (61%), Positives = 45/55 (81%)
 Frame = -2

Query: 398 LSTCKYALTVHSPMLCKHPMYKEQRPVWRTVNCNKIPKDSKPMGTEDGSSKDKQI 234
           LSTCKYALTV SPMLCKHP+++E+RPVW T+NCN +PKD K    ++  ++D+QI
Sbjct: 223 LSTCKYALTVQSPMLCKHPLFQEERPVWHTINCNLLPKDYKEAKPDEVETEDEQI 277


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