BLASTX nr result

ID: Coptis23_contig00008773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008773
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530545.1| protein binding protein, putative [Ricinus c...   145   5e-33
ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|2...   143   2e-32
ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261...   133   2e-29
emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]   133   2e-29
ref|NP_180334.1| cysteine/histidine-rich C1 domain-containing pr...   129   4e-28

>ref|XP_002530545.1| protein binding protein, putative [Ricinus communis]
           gi|223529907|gb|EEF31836.1| protein binding protein,
           putative [Ricinus communis]
          Length = 324

 Score =  145 bits (365), Expect = 5e-33
 Identities = 79/175 (45%), Positives = 100/175 (57%), Gaps = 19/175 (10%)
 Frame = -3

Query: 503 SQTSYLLSLLPI---------CNACGEKVTGFRYNCTTCDLDFHVMCASMPLSLKHQSHP 351
           S  ++ L LLP          C+ACG    GF Y+C  C  D H  CA  PLSL +Q HP
Sbjct: 69  SHPNHTLDLLPSPIYPNGVFSCDACGHGGLGFGYHCNHCSFDIHTTCAQNPLSLTNQFHP 128

Query: 350 HPLSLAFNPPYPTNGFYCDICQRLGSKYWLYRCNACEFDVHLDCA-----TSKPRISEIQ 186
           H L L F+PPY T GF CDICQ++GS +WLYRC  CEFD HL+CA      +  ++S+ Q
Sbjct: 129 HLLQLTFDPPYHTKGFSCDICQKIGSNHWLYRCAPCEFDAHLECAMGAVPVAAQQLSQYQ 188

Query: 185 HQVRAPQPQAPLQHRNSVPG---SNQPQFNPPRNVSQQP--NFYANIPSGSSTHG 36
            Q + PQPQ  LQH NS PG   S+Q Q    R V+  P  +F+A   +  +T G
Sbjct: 189 PQPQ-PQPQPQLQHHNSFPGAIISHQYQQYGNRVVNPPPAQSFFAQSQNMGTTQG 242


>ref|XP_002317723.1| predicted protein [Populus trichocarpa] gi|222858396|gb|EEE95943.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score =  143 bits (360), Expect = 2e-32
 Identities = 63/116 (54%), Positives = 77/116 (66%)
 Frame = -3

Query: 467 CNACGEKVTGFRYNCTTCDLDFHVMCASMPLSLKHQSHPHPLSLAFNPPYPTNGFYCDIC 288
           C+ CG +  GF Y+CTTCD D H+MCA+ PLSL HQSHPH L+LAF PPY T GF CDIC
Sbjct: 89  CDGCGLQGNGFNYHCTTCDFDVHMMCATNPLSLAHQSHPHQLNLAFYPPYQTKGFSCDIC 148

Query: 287 QRLGSKYWLYRCNACEFDVHLDCATSKPRISEIQHQVRAPQPQAPLQHRNSVPGSN 120
            ++GS +WLYRC+ACEFD H+ CA S               P   +QH NS+P +N
Sbjct: 149 HKIGSNHWLYRCSACEFDAHMKCAMSVNN-----------TPLPHVQHSNSLPVAN 193



 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 40/109 (36%), Positives = 60/109 (55%), Gaps = 1/109 (0%)
 Frame = -3

Query: 506 HSQTSYLLSLLPICNACGEKVTGFRYNCTTCDLDFHVMCASMPLSLKHQSHP-HPLSLAF 330
           ++Q+ Y+ S    C+AC  + +G+ Y+C  C+   H+ C  MP  + H  HP HPL+L  
Sbjct: 23  NAQSLYMNS----CSACNLQPSGWMYSCKPCNFTLHISCTQMPTLITHPCHPIHPLTLFS 78

Query: 329 NPPYPTNGFYCDICQRLGSKYWLYRCNACEFDVHLDCATSKPRISEIQH 183
            P YP   F CD C   G+ +  Y C  C+FDVH+ CAT+   ++   H
Sbjct: 79  TPVYPGGSFNCDGCGLQGNGF-NYHCTTCDFDVHMMCATNPLSLAHQSH 126


>ref|XP_002268131.1| PREDICTED: uncharacterized protein LOC100261320 [Vitis vinifera]
          Length = 360

 Score =  133 bits (334), Expect = 2e-29
 Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 21/171 (12%)
 Frame = -3

Query: 494 SYLLSLLPI---------CNACGEKVTGFRYNCTTCDLDFHVMCASMPLSLKHQSHPHPL 342
           ++ LSLLP          C+ACG++  GF Y+C  C++D H++CAS PL L HQSH H L
Sbjct: 76  AHALSLLPNPAYPEGLFNCDACGKQGNGFSYHCGVCNIDLHILCASKPLFLNHQSHHHRL 135

Query: 341 SLAFNPPYPTNGFYCDICQRLGSKYWLYRCNACEFDVHLDCATSKPRISEIQHQVRAPQP 162
           +L+F+PPY    F CDIC+++G+ +WLYRC+ CEFD HL CAT+ P        ++AP  
Sbjct: 136 ALSFSPPYHNKSFSCDICRQIGTSHWLYRCDECEFDAHLSCATATPAA-----PIQAPLQ 190

Query: 161 QAPLQHRNSVPGSNQPQFNPPRNVS------------QQPNFYANIPSGSS 45
           Q  +Q   +   +  P  + PRN S             QP  +   P+G +
Sbjct: 191 QNFMQQFQTASRAT-PHGHFPRNQSAIGQNYMQQLQTTQPTLHCQFPTGQN 240


>emb|CAN66246.1| hypothetical protein VITISV_033016 [Vitis vinifera]
          Length = 366

 Score =  133 bits (334), Expect = 2e-29
 Identities = 67/171 (39%), Positives = 96/171 (56%), Gaps = 21/171 (12%)
 Frame = -3

Query: 494 SYLLSLLPI---------CNACGEKVTGFRYNCTTCDLDFHVMCASMPLSLKHQSHPHPL 342
           ++ LSLLP          C+ACG++  GF Y+C  C++D H++CAS PL L HQSH H L
Sbjct: 82  AHALSLLPNPAYPEGLFNCDACGKQGNGFSYHCGVCNIDLHILCASKPLFLNHQSHHHRL 141

Query: 341 SLAFNPPYPTNGFYCDICQRLGSKYWLYRCNACEFDVHLDCATSKPRISEIQHQVRAPQP 162
           +L+F+PPY    F CDIC+++G+ +WLYRC+ CEFD HL CAT+ P        ++AP  
Sbjct: 142 ALSFSPPYHNKSFSCDICRQIGTSHWLYRCDECEFDAHLSCATATPAA-----PIQAPLQ 196

Query: 161 QAPLQHRNSVPGSNQPQFNPPRNVS------------QQPNFYANIPSGSS 45
           Q  +Q   +   +  P  + PRN S             QP  +   P+G +
Sbjct: 197 QNFMQQFQTASRAT-PHGHFPRNQSAIGQNYMQQLQTTQPTLHCQFPTGQN 246


>ref|NP_180334.1| cysteine/histidine-rich C1 domain-containing protein [Arabidopsis
           thaliana] gi|3860266|gb|AAC73034.1| hypothetical protein
           [Arabidopsis thaliana] gi|330252929|gb|AEC08023.1|
           cysteine/histidine-rich C1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 718

 Score =  129 bits (323), Expect = 4e-28
 Identities = 74/180 (41%), Positives = 97/180 (53%), Gaps = 19/180 (10%)
 Frame = -3

Query: 503 SQTSYLLSLL--PI-------CNACGEKVTGFRYNCTTCDLDFHVMCASMPLSLKHQSHP 351
           S  S+ LSLL  P+       C+ CG   TGF Y C+ CD D H +CA  PLS+ H+SHP
Sbjct: 69  SHPSHTLSLLVAPVYDGGYFNCDGCGIHGTGFSYQCSVCDFDIHALCAYKPLSIIHKSHP 128

Query: 350 -HPLSLAFNPPYPTN-GFYCDICQRLGSKYWLYRCNACEFDVHLDCATSKPRISEIQHQV 177
            H L LAF  PY  N GF CDIC+++G   WLYRC  CEFD H+ C T  P    +QH  
Sbjct: 129 QHNLKLAFQSPYGANKGFSCDICRKIGKNQWLYRCIPCEFDAHVGCITG-PNPHLLQHST 187

Query: 176 RAPQPQ----APLQHRNSVP----GSNQPQFNPPRNVSQQPNFYANIPSGSSTHGAKVEN 21
            AP P        QH+NS+P    GSN+ +  P    ++  N    I   ++ +G + +N
Sbjct: 188 SAPNPHTHHAGHPQHQNSLPVPNQGSNRVRPMPMTRPNRTINPNRPIAQNAAVNGPRRQN 247



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 46/149 (30%), Positives = 64/149 (42%), Gaps = 4/149 (2%)
 Frame = -3

Query: 473 PICNACGEKVTGFR---YNCTTCDLDFHVMCASMPLSLKHQSHP-HPLSLAFNPPYPTNG 306
           P C+AC  K+TG     Y+C  C+   H  C+ M   + H SHP H LSL   P Y    
Sbjct: 30  PPCSAC--KLTGGNGRVYSCRPCNFSLHESCSKMKQVITHPSHPSHTLSLLVAPVYDGGY 87

Query: 305 FYCDICQRLGSKYWLYRCNACEFDVHLDCATSKPRISEIQHQVRAPQPQAPLQHRNSVPG 126
           F CD C   G+ +  Y+C+ C+FD+H  CA     I    H    PQ    L  ++    
Sbjct: 88  FNCDGCGIHGTGF-SYQCSVCDFDIHALCAYKPLSIIHKSH----PQHNLKLAFQSPYGA 142

Query: 125 SNQPQFNPPRNVSQQPNFYANIPSGSSTH 39
           +     +  R + +    Y  IP     H
Sbjct: 143 NKGFSCDICRKIGKNQWLYRCIPCEFDAH 171


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