BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008766
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    57   1e-13
emb|CAN72727.1| hypothetical protein VITISV_015094 [Vitis vinifera]    66   1e-08
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    65   3e-08
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    65   3e-08
ref|YP_003202594.1| phosphoglycerate mutase [Nakamurella multipa...    65   3e-08

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 57.0 bits (136), Expect(2) = 1e-13
 Identities = 22/71 (30%), Positives = 37/71 (52%)
 Frame = +2

Query: 143 WAKFLWSSLASPKVKGTRWKIFHGAMHTDDRMKDKMKIKLASRCSICKRNEETKSHLLFQ 322
           W KFLW+S   P      W++ H  + TD+ ++ K    + S C  C ++ E+  H+ F+
Sbjct: 36  WDKFLWNSYIPPSRSFITWRLLHNKLPTDENLR-KRGCLIVSICCFCMKSAESSQHIFFE 94

Query: 323 CDIAVRAWTYL 355
           C +  R W +L
Sbjct: 95  CHVTSRLWDWL 105



 Score = 45.8 bits (107), Expect(2) = 1e-13
 Identities = 47/191 (24%), Positives = 75/191 (39%), Gaps = 5/191 (2%)
 Frame = +3

Query: 423 SSLVLDMWRGASITCLVSI*NNRN*VIYDEK----ASNFKFICQEIRREMVRAHIKSKGH 590
           S LV ++   A I  + SI   RN   +  K     + F  I  E++       IK    
Sbjct: 130 SKLVNNILNSAIIHTIWSIWIERNQRCFHNKHQAMTTLFNIILAEVKMSFSLCMIKGNSA 189

Query: 591 MKNNIQDMMXXXXXXXXXXXXXXXXVIECYWLLPPENIMKVNTDGCSIGNPGRSGWGNTF 770
           M    QD                   ++  W  P  +I+K+N DG S+G       G   
Sbjct: 190 M----QDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVI 245

Query: 771 RDKSGKIMGVAAGALGITTNNIAEAGAILEGIKKALEMGWTSIWVESNSKVMVQGFQQN- 947
           RD +   +G  +  +G  T   AE  A +  ++KA EM    + +E++S  +V  F +  
Sbjct: 246 RDSNHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAFNKGL 305

Query: 948 SVH*SMKDTWE 980
            V   M+  W+
Sbjct: 306 GVPWQMRARWQ 316


>emb|CAN72727.1| hypothetical protein VITISV_015094 [Vitis vinifera]
          Length = 1677

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 36/106 (33%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
 Frame = +2

Query: 146  AKFLWSSLASPKVKGTRWKIFHGAMHTDDRMK--DKMKIKLASRCSICKRNEETKSHLLF 319
            AKFLWSS    KVK   W + HG ++T+D+++     K      C +CKRN E+  H+  
Sbjct: 1503 AKFLWSSKVPSKVKALAWLVAHGKVNTNDKLQLXRPYKALCPQWCILCKRNGESSDHIFL 1562

Query: 320  QCDIAVRAWTYLANLFSLTRIPQE*RYSTVM*TFQLAGAGHVERSK 457
             C + +  W  L NL  L  +P       ++ TF+  G G+  R K
Sbjct: 1563 HCPVTIGLWHRLFNLVGLVWVPPRSLEDMLVITFK--GLGNSLRGK 1606


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 36/91 (39%), Positives = 53/91 (58%)
 Frame = +3

Query: 681 WLLPPENIMKVNTDGCSIGNPGRSGWGNTFRDKSGKIMGVAAGALGITTNNIAEAGAILE 860
           W  P E  +K+N DGCS GNPG +G G   RD  G  +G  A  +GI ++  AE  A+  
Sbjct: 76  WKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYV 135

Query: 861 GIKKALEMGWTSIWVESNSKVMVQGFQQNSV 953
           G++ A + G+  + +ES+SKV+V     +SV
Sbjct: 136 GLQLAWDRGFRKVDLESDSKVVVGLINGDSV 166


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 65.1 bits (157), Expect = 3e-08
 Identities = 36/91 (39%), Positives = 53/91 (58%)
 Frame = +3

Query: 681 WLLPPENIMKVNTDGCSIGNPGRSGWGNTFRDKSGKIMGVAAGALGITTNNIAEAGAILE 860
           W  P E  +K+N DGCS GNPG +G G   RD  G  +G  A  +GI ++  AE  A+  
Sbjct: 76  WKYPQEERIKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYV 135

Query: 861 GIKKALEMGWTSIWVESNSKVMVQGFQQNSV 953
           G++ A + G+  + +ES+SKV+V     +SV
Sbjct: 136 GLQLAWDRGFRKVDLESDSKVVVGLINGDSV 166


>ref|YP_003202594.1| phosphoglycerate mutase [Nakamurella multipartita DSM 44233]
           gi|258556663|gb|ACV79605.1| Phosphoglycerate mutase
           [Nakamurella multipartita DSM 44233]
          Length = 370

 Score = 64.7 bits (156), Expect = 3e-08
 Identities = 30/78 (38%), Positives = 50/78 (64%)
 Frame = +3

Query: 699 NIMKVNTDGCSIGNPGRSGWGNTFRDKSGKIMGVAAGALGITTNNIAEAGAILEGIKKAL 878
           N + V  DG S GNPG +G+G    D  G ++   A ++G  TNN+AE G ++ G++ AL
Sbjct: 8   NHVVVQADGGSRGNPGPAGYGAVVFDDQGAVLAERAASIGRATNNVAEYGGLIAGLEAAL 67

Query: 879 EMGWTSIWVESNSKVMVQ 932
           E+G  ++ V+ +SK++V+
Sbjct: 68  ELGAVTVAVQMDSKLVVE 85