BLASTX nr result

ID: Coptis23_contig00008764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008764
         (734 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313940.1| predicted protein [Populus trichocarpa] gi|2...    69   1e-09
ref|XP_002522053.1| conserved hypothetical protein [Ricinus comm...    67   4e-09
emb|CBI25085.3| unnamed protein product [Vitis vinifera]               60   4e-07
ref|XP_002272862.1| PREDICTED: uncharacterized protein LOC100266...    60   4e-07

>ref|XP_002313940.1| predicted protein [Populus trichocarpa] gi|222850348|gb|EEE87895.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 44/106 (41%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
 Frame = -2

Query: 733 DDGGSQDNEVEQFLHXXXXXXXXXXXXRMDEPGPYL-PCPSLDSRTRLSVNPDVGVGEYR 557
           +DGG +D EVE+FLH            RMD+ GPYL PCP  D +   ++N  +      
Sbjct: 183 EDGGLRDEEVEEFLHSRVKRGRGAVGSRMDDTGPYLAPCPDPDEKLSRNLNAKL------ 236

Query: 556 RGCVLGPEKPPSLKSNRSFDGGADKDDWKEMKKV-KVERWRKHSKK 422
           +  V GPEKP S KS  S +   DKD  K+ KKV    R +KHS+K
Sbjct: 237 QRVVFGPEKPSSRKSYESSEEELDKDRLKKEKKVCSKSRDKKHSRK 282


>ref|XP_002522053.1| conserved hypothetical protein [Ricinus communis]
           gi|223538652|gb|EEF40253.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 47/104 (45%), Positives = 58/104 (55%)
 Frame = -2

Query: 733 DDGGSQDNEVEQFLHXXXXXXXXXXXXRMDEPGPYLPCPSLDSRTRLSVNPDVGVGEYRR 554
           +D G +D EVE+FLH            RMDE GPYLP  S +S+ +LS + D    E+R 
Sbjct: 132 EDEGLRDEEVEEFLHSRVKRGRGAVGSRMDETGPYLP-RSPESKEKLSSSLDRR--EHRT 188

Query: 553 GCVLGPEKPPSLKSNRSFDGGADKDDWKEMKKVKVERWRKHSKK 422
             VLGPEKP  L S  S +   DKD  K+ KKV+     KHSKK
Sbjct: 189 --VLGPEKPSPLNSYESSEEELDKDRRKKAKKVQSRSSDKHSKK 230


>emb|CBI25085.3| unnamed protein product [Vitis vinifera]
          Length = 420

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
 Frame = -2

Query: 718 QDNEVEQFLHXXXXXXXXXXXXRMDEPGPYLPCPSLDSRTRLSVNPDVGV-GEYRRGCVL 542
           +D+EVE+FL+            RMDE GPYLP  S  S+ RL  NPD+ V  E+    VL
Sbjct: 298 RDDEVEEFLNSRVKRGRGAVGSRMDEAGPYLPHCS-HSKDRLLTNPDLRVREEWEHRVVL 356

Query: 541 GPEKPPSLKSNRSFDGGADKDDWKEMKKVKVERW----RKHSKK 422
           GPEKP SL+ + S +   DK  W   KK K  R     ++HS+K
Sbjct: 357 GPEKPSSLELSESSE---DKLHWDRRKKEKKVRSGSSNKQHSRK 397


>ref|XP_002272862.1| PREDICTED: uncharacterized protein LOC100266970 [Vitis vinifera]
           gi|147815299|emb|CAN61243.1| hypothetical protein
           VITISV_016134 [Vitis vinifera]
          Length = 254

 Score = 60.5 bits (145), Expect = 4e-07
 Identities = 44/104 (42%), Positives = 57/104 (54%), Gaps = 5/104 (4%)
 Frame = -2

Query: 718 QDNEVEQFLHXXXXXXXXXXXXRMDEPGPYLPCPSLDSRTRLSVNPDVGV-GEYRRGCVL 542
           +D+EVE+FL+            RMDE GPYLP  S  S+ RL  NPD+ V  E+    VL
Sbjct: 132 RDDEVEEFLNSRVKRGRGAVGSRMDEAGPYLPHCS-HSKDRLLTNPDLRVREEWEHRVVL 190

Query: 541 GPEKPPSLKSNRSFDGGADKDDWKEMKKVKVERW----RKHSKK 422
           GPEKP SL+ + S +   DK  W   KK K  R     ++HS+K
Sbjct: 191 GPEKPSSLELSESSE---DKLHWDRRKKEKKVRSGSSNKQHSRK 231


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