BLASTX nr result

ID: Coptis23_contig00008759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008759
         (216 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137322.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Cuc...   128   5e-28
emb|CBI15492.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002277056.1| PREDICTED: l-Ala-D/L-Glu epimerase [Vitis vi...   126   2e-27
ref|XP_002317902.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_003568272.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Bra...   123   2e-26

>ref|XP_004137322.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Cucumis sativus]
           gi|449497562|ref|XP_004160436.1| PREDICTED: LOW QUALITY
           PROTEIN: l-Ala-D/L-Glu epimerase-like [Cucumis sativus]
          Length = 432

 Score =  128 bits (321), Expect = 5e-28
 Identities = 62/71 (87%), Positives = 69/71 (97%)
 Frame = +3

Query: 3   LGALEIIDVARQSGLNLMIGGMVETRLAMGFAGHLAAGLGCFRFIDLDTPLLLSEDPVLG 182
           LGA+EII+VAR SGL+LMIGGMVETRLAMGF+GHLAAGLGCF++IDLDTPLLLSEDPV G
Sbjct: 345 LGAIEIIEVARGSGLSLMIGGMVETRLAMGFSGHLAAGLGCFKYIDLDTPLLLSEDPVHG 404

Query: 183 GYEVSGAVYEF 215
           GYEVSGAVY+F
Sbjct: 405 GYEVSGAVYKF 415


>emb|CBI15492.3| unnamed protein product [Vitis vinifera]
          Length = 401

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/71 (87%), Positives = 67/71 (94%)
 Frame = +3

Query: 3   LGALEIIDVARQSGLNLMIGGMVETRLAMGFAGHLAAGLGCFRFIDLDTPLLLSEDPVLG 182
           LGALEIID AR +GL+LMIGGMVETRLAMGFAGHLAAGLGCF+FIDLDTPLLLSEDPV  
Sbjct: 297 LGALEIIDAARAAGLDLMIGGMVETRLAMGFAGHLAAGLGCFKFIDLDTPLLLSEDPVQE 356

Query: 183 GYEVSGAVYEF 215
           GY+VSGAVY+F
Sbjct: 357 GYDVSGAVYKF 367


>ref|XP_002277056.1| PREDICTED: l-Ala-D/L-Glu epimerase [Vitis vinifera]
          Length = 420

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/71 (87%), Positives = 67/71 (94%)
 Frame = +3

Query: 3   LGALEIIDVARQSGLNLMIGGMVETRLAMGFAGHLAAGLGCFRFIDLDTPLLLSEDPVLG 182
           LGALEIID AR +GL+LMIGGMVETRLAMGFAGHLAAGLGCF+FIDLDTPLLLSEDPV  
Sbjct: 334 LGALEIIDAARAAGLDLMIGGMVETRLAMGFAGHLAAGLGCFKFIDLDTPLLLSEDPVQE 393

Query: 183 GYEVSGAVYEF 215
           GY+VSGAVY+F
Sbjct: 394 GYDVSGAVYKF 404


>ref|XP_002317902.1| predicted protein [Populus trichocarpa] gi|222858575|gb|EEE96122.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  124 bits (312), Expect = 6e-27
 Identities = 61/71 (85%), Positives = 66/71 (92%)
 Frame = +3

Query: 3   LGALEIIDVARQSGLNLMIGGMVETRLAMGFAGHLAAGLGCFRFIDLDTPLLLSEDPVLG 182
           +G LEII+ AR SGL+LMIGGMVETRLAMGFAGHLAAG GCF+FIDLDTPLLLSEDPVL 
Sbjct: 300 VGGLEIIEEARTSGLDLMIGGMVETRLAMGFAGHLAAGFGCFKFIDLDTPLLLSEDPVLE 359

Query: 183 GYEVSGAVYEF 215
           GYEVSGAVY+F
Sbjct: 360 GYEVSGAVYKF 370


>ref|XP_003568272.1| PREDICTED: l-Ala-D/L-Glu epimerase-like [Brachypodium distachyon]
          Length = 442

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/71 (81%), Positives = 65/71 (91%)
 Frame = +3

Query: 3   LGALEIIDVARQSGLNLMIGGMVETRLAMGFAGHLAAGLGCFRFIDLDTPLLLSEDPVLG 182
           LGALE+ID AR++G+ LMIGGMVETR+AMGFAGHLAAGLGCF FIDLDTPLLLSEDPV G
Sbjct: 353 LGALEVIDAARKAGIALMIGGMVETRIAMGFAGHLAAGLGCFSFIDLDTPLLLSEDPVYG 412

Query: 183 GYEVSGAVYEF 215
           GYE SG +Y+F
Sbjct: 413 GYEASGPLYKF 423


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