BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008726
         (2073 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29220.3| unnamed protein product [Vitis vinifera]              421   e-115
ref|XP_002519903.1| RNA exonuclease NGL1, putative [Ricinus comm...   409   e-111
ref|XP_002304397.1| predicted protein [Populus trichocarpa] gi|2...   409   e-111
ref|XP_002270851.2| PREDICTED: carbon catabolite repressor prote...   399   e-108
ref|XP_004171083.1| PREDICTED: carbon catabolite repressor prote...   388   e-105

>emb|CBI29220.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  421 bits (1081), Expect = e-115
 Identities = 223/356 (62%), Positives = 261/356 (73%), Gaps = 10/356 (2%)
 Frame = -1

Query: 1194 PKF---KPLDEYAKQNDNGNKFRIVSYNILAQVFVKSSYFPHSPSPCLRWKARSQAVLTV 1024
            PKF   + +D  ++   +G +F +VSYNILAQV+VKSS FPHSPSPCL+WKARSQA+LTV
Sbjct: 37   PKFISVEGVDINSRSIPDGFRFSLVSYNILAQVYVKSSLFPHSPSPCLKWKARSQAILTV 96

Query: 1023 LKSLESDFLCLQELDEYDCFYKEKLETDGYSSIYVQRSGQKRDGCGIFYKPNSAELLLEE 844
            L++L +DFLCLQE+DEYD FYK  ++++GYSSIYVQRSGQK DGCGIFYK NSAEL+LEE
Sbjct: 97   LRNLGADFLCLQEVDEYDSFYKGNMDSNGYSSIYVQRSGQKHDGCGIFYKHNSAELVLEE 156

Query: 843  KIEYNDLV---DGISSCVSEHDVTQVTGNGDDVPIEGAPLKKXXXXXXXXXXXXXRLKRD 673
            KIEYNDLV   D  S     H  T  + N D  P +G+  +              RLKRD
Sbjct: 157  KIEYNDLVDLNDDGSYSNDRHCDTPASANSDAEPKKGSSPQNTTEERGDPNDPRVRLKRD 216

Query: 672  CVGVMGAFKLKDLH---VIVANTHLYWDPELADVKLEQAKYLLLRLTQFKAIVANKLGCT 502
            CVG+M AF+LKD     VIVANTHLYWDPE ADVKL QAKYLL RL QFK +V++K  CT
Sbjct: 217  CVGIMAAFRLKDPSHHLVIVANTHLYWDPEWADVKLAQAKYLLSRLAQFKTVVSDKFECT 276

Query: 501  ASIIVCGDFNSTPGDQVYQYLVSGYSSSIPHNNAED-LPIPLCSVYAYDTGKEPPFTNCT 325
             S++V GDFNSTPGD+VYQYLVSG +SS+P     D LPIPLCSVY +  G EPPFTNCT
Sbjct: 277  PSVLVAGDFNSTPGDKVYQYLVSG-NSSVPQLECLDGLPIPLCSVYDFTRG-EPPFTNCT 334

Query: 324  PMFTNTLDYIFFSPSXXXXXXXXXXXXXXESSEVAGGLPNYHHPSDHLPIGAEFVI 157
            P FTNTLDYIFFSPS              +SS+VAGGLPN+HHPSDHLPIGAEF +
Sbjct: 335  PDFTNTLDYIFFSPSGHIKPVSFLELPEPDSSDVAGGLPNHHHPSDHLPIGAEFKV 390


>ref|XP_002519903.1| RNA exonuclease NGL1, putative [Ricinus communis]
            gi|223540949|gb|EEF42507.1| RNA exonuclease NGL1,
            putative [Ricinus communis]
          Length = 443

 Score =  409 bits (1052), Expect = e-111
 Identities = 212/357 (59%), Positives = 254/357 (71%), Gaps = 11/357 (3%)
 Frame = -1

Query: 1194 PKFKPLDE---YAKQNDNGNKFRIVSYNILAQVFVKSSYFPHSPSPCLRWKARSQAVLTV 1024
            PKF P+     ++    +G + R+VSYNILAQV+VKSSYFPH PSP L+WK+RS+A+LT+
Sbjct: 85   PKFIPVQAPHVFSTTKPDGIRVRLVSYNILAQVYVKSSYFPHCPSPSLKWKSRSKAILTI 144

Query: 1023 LKSLESDFLCLQELDEYDCFYKEKLETDGYSSIYVQRSGQKRDGCGIFYKPNSAELLLEE 844
            LK+LE+DFLCLQE+DEYD FYK+ +E  GYSSIY+QRSGQKRDGCGIFYK + AELLLEE
Sbjct: 145  LKNLEADFLCLQEVDEYDSFYKQNMEIHGYSSIYIQRSGQKRDGCGIFYKHDCAELLLEE 204

Query: 843  KIEYNDLVDGI--SSCVSEHDVTQVTGNGDD--VPIEGAPLKKXXXXXXXXXXXXXRLKR 676
            +IEYNDLV+ +   +C+      +   NGD    P  GA  K              RLKR
Sbjct: 205  RIEYNDLVNSVQEEACLCGDKPIETDANGDKSVEPKNGASSKSTPEDRGDPNDPRVRLKR 264

Query: 675  DCVGVMGAFKLKDLH---VIVANTHLYWDPELADVKLEQAKYLLLRLTQFKAIVANKLGC 505
            DC+G+M AF+LKD     VIVANTHLYWDPE ADVKL QAKYLL RL+QFK +V+N+  C
Sbjct: 265  DCIGIMAAFRLKDAFRHIVIVANTHLYWDPEWADVKLAQAKYLLSRLSQFKILVSNQFEC 324

Query: 504  TASIIVCGDFNSTPGDQVYQYLVSGYSSSIPHNNA-EDLPIPLCSVYAYDTGKEPPFTNC 328
            + S+ + GDFNS PGD+VYQY+VSG SS  P     +DLPIPLCSVY +  G EPPFTNC
Sbjct: 325  SPSLFLAGDFNSIPGDKVYQYVVSGNSSFAPTVECLDDLPIPLCSVYGHTRG-EPPFTNC 383

Query: 327  TPMFTNTLDYIFFSPSXXXXXXXXXXXXXXESSEVAGGLPNYHHPSDHLPIGAEFVI 157
            TP FTNTLDYIFFSP                S +V GGLPN++HPSDHLPIGAEF I
Sbjct: 384  TPDFTNTLDYIFFSPDEKITPISFLELPEGNSPDVLGGLPNFYHPSDHLPIGAEFEI 440


>ref|XP_002304397.1| predicted protein [Populus trichocarpa] gi|222841829|gb|EEE79376.1|
            predicted protein [Populus trichocarpa]
          Length = 356

 Score =  409 bits (1050), Expect = e-111
 Identities = 215/356 (60%), Positives = 250/356 (70%), Gaps = 10/356 (2%)
 Frame = -1

Query: 1194 PKFKPL---DEYAKQNDNGNKFRIVSYNILAQVFVKSSYFPHSPSPCLRWKARSQAVLTV 1024
            PKF  +   D Y++   +G +F +VSYNILAQV+VKSS FPHSPSPCL+WKARSQ +LTV
Sbjct: 11   PKFISVEGDDIYSRSKPDGVRFSLVSYNILAQVYVKSSIFPHSPSPCLKWKARSQEILTV 70

Query: 1023 LKSLESDFLCLQELDEYDCFYKEKLETDGYSSIYVQRSGQKRDGCGIFYKPNSAELLLEE 844
            LK+L +DFLCLQELDEYD FYK+ +E+ GYSSIY+QRSGQKRDGCGIFYKP+ A+LLLEE
Sbjct: 71   LKNLGTDFLCLQELDEYDSFYKKNIESYGYSSIYIQRSGQKRDGCGIFYKPDCADLLLEE 130

Query: 843  KIEYNDLVDGISS----CVSEHDVTQVTGNGDDVPIEGAPLKKXXXXXXXXXXXXXRLKR 676
            +IEYNDLVD I      C  +H  TQ  G+ +  P                     RLKR
Sbjct: 131  RIEYNDLVDSIQDVSILCDDKHSDTQANGDENSEP------------KNDPNDPRVRLKR 178

Query: 675  DCVGVMGAFKLKDL--HVIVANTHLYWDPELADVKLEQAKYLLLRLTQFKAIVANKLGCT 502
            DCVG+M AF+LK+   HVIVANTH+YWDPE ADVKL QAKYLL R+ QFK +V+ K  C 
Sbjct: 179  DCVGIMAAFRLKNTPHHVIVANTHIYWDPEWADVKLAQAKYLLSRVAQFKELVSEKYECM 238

Query: 501  ASIIVCGDFNSTPGDQVYQYLVSGYSSSIPHNNA-EDLPIPLCSVYAYDTGKEPPFTNCT 325
             S+I+ GDFNS PGD+VY+YLVSG SSS       ++LPIPLCSVY    G EPPFTNCT
Sbjct: 239  PSVILAGDFNSIPGDKVYEYLVSGSSSSASLAECLDELPIPLCSVYGSTRG-EPPFTNCT 297

Query: 324  PMFTNTLDYIFFSPSXXXXXXXXXXXXXXESSEVAGGLPNYHHPSDHLPIGAEFVI 157
            P FTNTLDYIFF P                S  V GGLPNY+HPSDHLPIGAEF I
Sbjct: 298  PDFTNTLDYIFFVPDDQIKPLSFLELPEANSPNVLGGLPNYYHPSDHLPIGAEFEI 353


>ref|XP_002270851.2| PREDICTED: carbon catabolite repressor protein 4 homolog 4-like
            [Vitis vinifera]
          Length = 393

 Score =  399 bits (1026), Expect = e-108
 Identities = 209/324 (64%), Positives = 240/324 (74%), Gaps = 7/324 (2%)
 Frame = -1

Query: 1107 VFVKSSYFPHSPSPCLRWKARSQAVLTVLKSLESDFLCLQELDEYDCFYKEKLETDGYSS 928
            V+VKSS FPHSPSPCL+WKARSQA+LTVL++L +DFLCLQE+DEYD FYK  ++++GYSS
Sbjct: 69   VYVKSSLFPHSPSPCLKWKARSQAILTVLRNLGADFLCLQEVDEYDSFYKGNMDSNGYSS 128

Query: 927  IYVQRSGQKRDGCGIFYKPNSAELLLEEKIEYNDLV---DGISSCVSEHDVTQVTGNGDD 757
            IYVQRSGQK DGCGIFYK NSAEL+LEEKIEYNDLV   D  S     H  T  + N D 
Sbjct: 129  IYVQRSGQKHDGCGIFYKHNSAELVLEEKIEYNDLVDLNDDGSYSNDRHCDTPASANSDA 188

Query: 756  VPIEGAPLKKXXXXXXXXXXXXXRLKRDCVGVMGAFKLKDLH---VIVANTHLYWDPELA 586
             P +G+  +              RLKRDCVG+M AF+LKD     VIVANTHLYWDPE A
Sbjct: 189  EPKKGSSPQNTTEERGDPNDPRVRLKRDCVGIMAAFRLKDPSHHLVIVANTHLYWDPEWA 248

Query: 585  DVKLEQAKYLLLRLTQFKAIVANKLGCTASIIVCGDFNSTPGDQVYQYLVSGYSSSIPHN 406
            DVKL QAKYLL RL QFK +V++K  CT S++V GDFNSTPGD+VYQYLVSG +SS+P  
Sbjct: 249  DVKLAQAKYLLSRLAQFKTVVSDKFECTPSVLVAGDFNSTPGDKVYQYLVSG-NSSVPQL 307

Query: 405  NAED-LPIPLCSVYAYDTGKEPPFTNCTPMFTNTLDYIFFSPSXXXXXXXXXXXXXXESS 229
               D LPIPLCSVY +  G EPPFTNCTP FTNTLDYIFFSPS              +SS
Sbjct: 308  ECLDGLPIPLCSVYDFTRG-EPPFTNCTPDFTNTLDYIFFSPSGHIKPVSFLELPEPDSS 366

Query: 228  EVAGGLPNYHHPSDHLPIGAEFVI 157
            +VAGGLPN+HHPSDHLPIGAEF +
Sbjct: 367  DVAGGLPNHHHPSDHLPIGAEFKV 390


>ref|XP_004171083.1| PREDICTED: carbon catabolite repressor protein 4 homolog 4-like
            [Cucumis sativus]
          Length = 394

 Score =  388 bits (997), Expect = e-105
 Identities = 208/349 (59%), Positives = 246/349 (70%), Gaps = 9/349 (2%)
 Frame = -1

Query: 1176 DEYAKQNDNGNKFRIVSYNILAQVFVKSSYFPHSPSPCLRWKARSQAVLTVLKSLESDFL 997
            D Y++   +G +FR VSYNILAQV+VKSS+FPHSPS CL+WKARSQA+L VLK+LE+DFL
Sbjct: 43   DIYSRSKSDGIRFRFVSYNILAQVYVKSSFFPHSPSSCLKWKARSQAILAVLKNLEADFL 102

Query: 996  CLQELDEYDCFYKEKLETDGYSSIYVQRSGQKRDGCGIFYKPNSAELLLEEKIEYNDLVD 817
            CLQE+DEYD FYK  LE  GYSS+Y+QRSGQKRDGCGIF+K   AEL++E++IEYNDLV 
Sbjct: 103  CLQEVDEYDSFYKGNLERCGYSSLYIQRSGQKRDGCGIFFKHEKAELIVEDRIEYNDLVG 162

Query: 816  GI---SSCVSEHDVTQVTGNGDDVPI-EGAPLKKXXXXXXXXXXXXXRLKRDCVGVMGAF 649
             +   S    +  V  VT   +DV   +G+  K              RLKRDCVG+M AF
Sbjct: 163  SVQDDSGSCEDKSVDVVTSASNDVESNKGSSPKTTVADRGDPNDPRVRLKRDCVGIMAAF 222

Query: 648  KLKD-LH--VIVANTHLYWDPELADVKLEQAKYLLLRLTQFKAIVANKLGCTASIIVCGD 478
            KL+   H  VIVANTHLYWDPE ADVKL QAKYLL RL +FK++VA K  CT SI++ GD
Sbjct: 223  KLEQPFHHVVIVANTHLYWDPEWADVKLAQAKYLLSRLARFKSLVAEKFECTPSILLAGD 282

Query: 477  FNSTPGDQVYQYLVSGYSSS--IPHNNAEDLPIPLCSVYAYDTGKEPPFTNCTPMFTNTL 304
            FNSTPGD+VY+YLVSG SSS   P    ++LP+PL SVYA   G EP FTN TP FT TL
Sbjct: 283  FNSTPGDKVYEYLVSGNSSSGFSPECLDQELPLPLSSVYANILGSEPSFTNFTPGFTGTL 342

Query: 303  DYIFFSPSXXXXXXXXXXXXXXESSEVAGGLPNYHHPSDHLPIGAEFVI 157
            DYIFFSPS              E  E+ GGLPN+ +PSDHLPI AEF I
Sbjct: 343  DYIFFSPSDFIRPISFLELPESEWPEIIGGLPNHSYPSDHLPIAAEFEI 391