BLASTX nr result

ID: Coptis23_contig00008721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008721
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   269   5e-70
ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   264   2e-68
emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]   258   1e-66
ref|XP_004134080.1| PREDICTED: carnitinyl-CoA dehydratase-like [...   251   1e-64
ref|XP_004134079.1| PREDICTED: fatty acid oxidation complex subu...   245   8e-63

>ref|XP_002284547.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  269 bits (688), Expect = 5e-70
 Identities = 133/236 (56%), Positives = 172/236 (72%), Gaps = 1/236 (0%)
 Frame = -2

Query: 811 TLETRGNIFLLTLTGETEHRLSPSVISHLRSLLSQIRSEAKPGSVLITTAQGKFFSNGFD 632
           TLE RGN+F LTLTG+ EHRL PS+   +RS L+Q++S+A PGS LITTAQGKFFSNG D
Sbjct: 3   TLEQRGNLFFLTLTGDNEHRLGPSLFDSIRSALAQVKSQATPGSALITTAQGKFFSNGLD 62

Query: 631 LTWAQSNGPSFFRDRLHQMVIEFKPVISDLISLPLPTIXXXXXXXXXAGFLLAIGHDYVY 452
           L WAQ+ G S FRDRL  ++  FKP+++DL+SLP+PTI         AGF+LAI HDYV 
Sbjct: 63  LAWAQAAGSSSFRDRLSHLLDCFKPIVADLLSLPMPTIAAVSGHAAAAGFMLAISHDYVL 122

Query: 451 MRKDRGILYMSELDIGMTLPDYFMAFMREKIG-VKSLRDVVLQGKRIKGEDGVKMGIIDE 275
           M+ DR +LYMSELDIG+T PDYFMA M+ KI    + RDV+L+ K++K E+ V+MGI+D 
Sbjct: 123 MKNDRSVLYMSELDIGLTFPDYFMAMMKSKISDPAARRDVMLRAKKVKAEEAVRMGIVDS 182

Query: 274 VFCNAEETIEAAFKMGDKLGSRKWNGEVYLEIRKSTLKGVLPVLGLVEKEVLVARL 107
              +AE T+EAA ++ ++L  RKWNGEVY EIRK+    V  +LGL  + V+  RL
Sbjct: 183 AHDSAESTVEAAVRLAEQLSGRKWNGEVYAEIRKAMHPEVCGLLGLSHRAVVAPRL 238


>ref|XP_002284541.1| PREDICTED: carnitinyl-CoA dehydratase-like [Vitis vinifera]
          Length = 238

 Score =  264 bits (675), Expect = 2e-68
 Identities = 130/236 (55%), Positives = 172/236 (72%), Gaps = 1/236 (0%)
 Frame = -2

Query: 811 TLETRGNIFLLTLTGETEHRLSPSVISHLRSLLSQIRSEAKPGSVLITTAQGKFFSNGFD 632
           TLE RGN+FLL LTG+ EHRL P+++  +RS L+Q++S+A PGS LITTA GKFFSNG D
Sbjct: 3   TLEQRGNLFLLILTGDNEHRLGPTLVDSIRSALAQVKSQATPGSALITTAHGKFFSNGLD 62

Query: 631 LTWAQSNGPSFFRDRLHQMVIEFKPVISDLISLPLPTIXXXXXXXXXAGFLLAIGHDYVY 452
           L WAQ+ G S FRDRL+ +V  FKP+I+DL+SLP+PTI         AGF+LAI HDYV 
Sbjct: 63  LPWAQAAGSSGFRDRLNHLVNNFKPIIADLLSLPMPTIAAVSGHAAAAGFMLAISHDYVL 122

Query: 451 MRKDRGILYMSELDIGMTLPDYFMAFMREKIG-VKSLRDVVLQGKRIKGEDGVKMGIIDE 275
           M+ DR +LYMSELDIG+T  DYFMA ++ +I    + RDV+L+ K++K E+ V+MGI+D 
Sbjct: 123 MKNDRSVLYMSELDIGLTFADYFMAMLKSRISDPAARRDVMLRAKKVKAEEAVRMGIVDS 182

Query: 274 VFCNAEETIEAAFKMGDKLGSRKWNGEVYLEIRKSTLKGVLPVLGLVEKEVLVARL 107
              +AE T+EAA ++ ++L  RKWNGEVY EIRK+    V  +LGL  + V+  RL
Sbjct: 183 AHDSAESTVEAAVRLAEQLSGRKWNGEVYAEIRKAMHPEVCGLLGLSHRAVVAPRL 238


>emb|CAN82902.1| hypothetical protein VITISV_036844 [Vitis vinifera]
          Length = 238

 Score =  258 bits (659), Expect = 1e-66
 Identities = 128/232 (55%), Positives = 168/232 (72%), Gaps = 1/232 (0%)
 Frame = -2

Query: 811 TLETRGNIFLLTLTGETEHRLSPSVISHLRSLLSQIRSEAKPGSVLITTAQGKFFSNGFD 632
           TLE RGN+FLL LTG+ EHRL P+++  +RS L+Q++S+A PGS LITTA  KFFSNG D
Sbjct: 3   TLEERGNLFLLILTGDNEHRLGPTLVDSIRSALAQVKSQATPGSALITTAHDKFFSNGLD 62

Query: 631 LTWAQSNGPSFFRDRLHQMVIEFKPVISDLISLPLPTIXXXXXXXXXAGFLLAIGHDYVY 452
           L WAQ+ G S FRDRL+ +V  FKP+I+DL+SLP+PTI         AGF LAI HDYV 
Sbjct: 63  LPWAQAAGSSGFRDRLNHLVNNFKPIIADLLSLPMPTIAAVSGHAAAAGFRLAISHDYVL 122

Query: 451 MRKDRGILYMSELDIGMTLPDYFMAFMREKIG-VKSLRDVVLQGKRIKGEDGVKMGIIDE 275
           M+ DR +LYMSELDIG+T  DYFMA ++ KI    + RDV+L+ K++K E+ V+MGI+D 
Sbjct: 123 MKNDRSVLYMSELDIGLTFADYFMAMLKSKISDPAARRDVMLRAKKVKAEEAVRMGIVDS 182

Query: 274 VFCNAEETIEAAFKMGDKLGSRKWNGEVYLEIRKSTLKGVLPVLGLVEKEVL 119
              +AE T+EAA ++ ++L  RKWNGEVY EIRK+    V  +LGL  + V+
Sbjct: 183 THDSAESTVEAAVRLAEQLSGRKWNGEVYAEIRKAMHPEVCGLLGLSHRAVV 234


>ref|XP_004134080.1| PREDICTED: carnitinyl-CoA dehydratase-like [Cucumis sativus]
           gi|449523557|ref|XP_004168790.1| PREDICTED:
           carnitinyl-CoA dehydratase-like [Cucumis sativus]
          Length = 239

 Score =  251 bits (641), Expect = 1e-64
 Identities = 127/237 (53%), Positives = 170/237 (71%), Gaps = 2/237 (0%)
 Frame = -2

Query: 811 TLETRGNIFLLTLTGETEHRLSPSVISHLRSLLSQIRSEAKPGSVLITTAQGKFFSNGFD 632
           TLE R N+F+LTLTG  +HR SPSVI+ +   LS+++S+A  GSVLITT+ GKFFSNGFD
Sbjct: 3   TLEKRRNLFILTLTGHDDHRFSPSVIAAILEALSKVKSQASTGSVLITTSHGKFFSNGFD 62

Query: 631 LTWAQSNGP-SFFRDRLHQMVIEFKPVISDLISLPLPTIXXXXXXXXXAGFLLAIGHDYV 455
           L+WAQ+ G  S   +RLH MV  FKPV+++L+SLP+PTI         AGFLLA+ HDY+
Sbjct: 63  LSWAQAAGSVSAAAERLHHMVQIFKPVVAELLSLPMPTIAAISGHAAAAGFLLALSHDYL 122

Query: 454 YMRKDRGILYMSELDIGMTLPDYFMAFMREKIGVKSL-RDVVLQGKRIKGEDGVKMGIID 278
            MR DRG+LYMSE+D+G++LPDYF A  + KI   S+ RDV+++G ++KGE  VKMGI D
Sbjct: 123 LMRSDRGVLYMSEVDLGLSLPDYFAALFKSKIASSSVRRDVLMRGMKVKGEAAVKMGIAD 182

Query: 277 EVFCNAEETIEAAFKMGDKLGSRKWNGEVYLEIRKSTLKGVLPVLGLVEKEVLVARL 107
                    +EAA ++G++LG RKWNGE Y EIRKS    +  +LGL EK + +++L
Sbjct: 183 SAHDGENGVMEAAVRLGEQLGERKWNGEPYAEIRKSLYPEISRLLGLPEKAISISKL 239


>ref|XP_004134079.1| PREDICTED: fatty acid oxidation complex subunit alpha-like [Cucumis
           sativus]
          Length = 239

 Score =  245 bits (626), Expect = 8e-63
 Identities = 122/237 (51%), Positives = 168/237 (70%), Gaps = 2/237 (0%)
 Frame = -2

Query: 811 TLETRGNIFLLTLTGETEHRLSPSVISHLRSLLSQIRSEAKPGSVLITTAQGKFFSNGFD 632
           T+E RGN F+LTLTG+ +HRLSPS+I+ +   LSQ++++A P SVLITT+ GKFFSNGFD
Sbjct: 3   TVEKRGNFFILTLTGDDDHRLSPSLINSILKALSQVKAQASPASVLITTSHGKFFSNGFD 62

Query: 631 LTWAQSNGP-SFFRDRLHQMVIEFKPVISDLISLPLPTIXXXXXXXXXAGFLLAIGHDYV 455
           L WA S G  S  R RL+ ++  FK V+++LISLP+PTI         AGF LA+ HDY+
Sbjct: 63  LPWALSAGSVSAARHRLNHLIEIFKSVVAELISLPMPTIAAITGHAAAAGFTLALSHDYL 122

Query: 454 YMRKDRGILYMSELDIGMTLPDYFMAFMREKIGVK-SLRDVVLQGKRIKGEDGVKMGIID 278
            MR DRG+LYM ELD+G+TLPDYFMA  + KIG   ++RD++L+G +++GE  V+MGI+D
Sbjct: 123 IMRSDRGVLYMRELDLGLTLPDYFMALFKSKIGSSLAMRDLILRGMKVRGEAAVRMGIVD 182

Query: 277 EVFCNAEETIEAAFKMGDKLGSRKWNGEVYLEIRKSTLKGVLPVLGLVEKEVLVARL 107
                 +  + AA ++G++L  R W+GEVY EIRKS    V  VLGL  K + +++L
Sbjct: 183 SAHDGEDSVVNAAVRLGEQLAGRNWDGEVYAEIRKSLYPEVSEVLGLPGKPISISKL 239


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