BLASTX nr result

ID: Coptis23_contig00008693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008693
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281149.1| PREDICTED: trafficking protein particle comp...   265   6e-69
ref|XP_002314001.1| predicted protein [Populus trichocarpa] gi|2...   262   5e-68
ref|XP_004144741.1| PREDICTED: trafficking protein particle comp...   258   1e-66
ref|XP_002534307.1| synbindin, putative [Ricinus communis] gi|22...   254   8e-66
ref|NP_001235954.1| uncharacterized protein LOC100305989 [Glycin...   254   1e-65

>ref|XP_002281149.1| PREDICTED: trafficking protein particle complex subunit 4 [Vitis
           vinifera] gi|147807581|emb|CAN66318.1| hypothetical
           protein VITISV_040622 [Vitis vinifera]
           gi|296089818|emb|CBI39637.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  265 bits (677), Expect = 6e-69
 Identities = 127/136 (93%), Positives = 133/136 (97%)
 Frame = +2

Query: 113 AAIFSLFIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTVGCSGIEL 292
           AAI+SL+IINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPT+GCSGIEL
Sbjct: 2   AAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTLGCSGIEL 61

Query: 293 LEADSFDLHCFQSLTGTKFFVVSEPGAQHMESLLKVIYELYTDYVLKNPFYEMEMPVRCE 472
           LEAD+FDLHCFQSLTGTKFFVV EPG QHME LLKVIYELYTDYVLKNPFYEMEMP+RCE
Sbjct: 62  LEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKVIYELYTDYVLKNPFYEMEMPIRCE 121

Query: 473 LFDINLSQAIQKDRVA 520
           LFDINLSQA+QKDRVA
Sbjct: 122 LFDINLSQAVQKDRVA 137


>ref|XP_002314001.1| predicted protein [Populus trichocarpa] gi|222850409|gb|EEE87956.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  262 bits (669), Expect = 5e-68
 Identities = 126/136 (92%), Positives = 132/136 (97%)
 Frame = +2

Query: 113 AAIFSLFIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTVGCSGIEL 292
           AAI+SL+IINKSGGLIFYKDYGS+GRMDTNDSLR+ASLWHSMHAISQQLSPTVGC GIEL
Sbjct: 2   AAIYSLYIINKSGGLIFYKDYGSSGRMDTNDSLRVASLWHSMHAISQQLSPTVGCLGIEL 61

Query: 293 LEADSFDLHCFQSLTGTKFFVVSEPGAQHMESLLKVIYELYTDYVLKNPFYEMEMPVRCE 472
           LEAD+FDLHCFQSLTGTKFFVV EPG QHME LLKVIYELYTDYVLKNPFYEMEMP+RCE
Sbjct: 62  LEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKVIYELYTDYVLKNPFYEMEMPIRCE 121

Query: 473 LFDINLSQAIQKDRVA 520
           LFDINLSQAIQKDRVA
Sbjct: 122 LFDINLSQAIQKDRVA 137


>ref|XP_004144741.1| PREDICTED: trafficking protein particle complex subunit 4-like
           [Cucumis sativus] gi|449490796|ref|XP_004158709.1|
           PREDICTED: trafficking protein particle complex subunit
           4-like [Cucumis sativus]
          Length = 141

 Score =  258 bits (658), Expect = 1e-66
 Identities = 122/136 (89%), Positives = 131/136 (96%)
 Frame = +2

Query: 113 AAIFSLFIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTVGCSGIEL 292
           AAI+SL+IINKSGGLIFYKDYGSAGRMDTNDSLR+ASLWHSMHAISQQLSP  GCSG+EL
Sbjct: 2   AAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVEL 61

Query: 293 LEADSFDLHCFQSLTGTKFFVVSEPGAQHMESLLKVIYELYTDYVLKNPFYEMEMPVRCE 472
           LEAD+FDLHCFQSLTGTKFFVV EPG QHMESLLK IYELYTD+VLKNPFYEMEMP+RCE
Sbjct: 62  LEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRCE 121

Query: 473 LFDINLSQAIQKDRVA 520
           LFDINL+QA+QKDRVA
Sbjct: 122 LFDINLAQAVQKDRVA 137


>ref|XP_002534307.1| synbindin, putative [Ricinus communis] gi|223525526|gb|EEF28075.1|
           synbindin, putative [Ricinus communis]
          Length = 141

 Score =  254 bits (650), Expect = 8e-66
 Identities = 121/136 (88%), Positives = 130/136 (95%)
 Frame = +2

Query: 113 AAIFSLFIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTVGCSGIEL 292
           AAI+SL+IINKSGGLIFYKDYGS GRMDTNDSLR+ASLWHSMHAISQQLSP VGCSGIEL
Sbjct: 2   AAIYSLYIINKSGGLIFYKDYGSGGRMDTNDSLRVASLWHSMHAISQQLSPVVGCSGIEL 61

Query: 293 LEADSFDLHCFQSLTGTKFFVVSEPGAQHMESLLKVIYELYTDYVLKNPFYEMEMPVRCE 472
           L+AD+FDLHCFQSLTGTKFFVV EPG  HME+LLKVIYELYTDYVLKNPFYEMEMP+RCE
Sbjct: 62  LQADTFDLHCFQSLTGTKFFVVCEPGTPHMEALLKVIYELYTDYVLKNPFYEMEMPIRCE 121

Query: 473 LFDINLSQAIQKDRVA 520
           LFDIN++Q IQKDRVA
Sbjct: 122 LFDINVTQIIQKDRVA 137


>ref|NP_001235954.1| uncharacterized protein LOC100305989 [Glycine max]
           gi|255627205|gb|ACU13947.1| unknown [Glycine max]
          Length = 141

 Score =  254 bits (649), Expect = 1e-65
 Identities = 120/135 (88%), Positives = 130/135 (96%)
 Frame = +2

Query: 113 AAIFSLFIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTVGCSGIEL 292
           AAI+SL+IINKSGGLI+YKDYGSAGRMDTNDSLR+ASLWHSMHAISQQLSP  GC GIEL
Sbjct: 2   AAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVSGCLGIEL 61

Query: 293 LEADSFDLHCFQSLTGTKFFVVSEPGAQHMESLLKVIYELYTDYVLKNPFYEMEMPVRCE 472
           L+AD+FDLHCFQSLTGTKFFVVSEPGAQHMESLLK +YELYTDYVLKNPFYEMEMP+RCE
Sbjct: 62  LQADTFDLHCFQSLTGTKFFVVSEPGAQHMESLLKFVYELYTDYVLKNPFYEMEMPIRCE 121

Query: 473 LFDINLSQAIQKDRV 517
           LFDINL+QA+QKD V
Sbjct: 122 LFDINLTQAVQKDHV 136


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