BLASTX nr result
ID: Coptis23_contig00008693
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00008693 (686 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002281149.1| PREDICTED: trafficking protein particle comp... 265 6e-69 ref|XP_002314001.1| predicted protein [Populus trichocarpa] gi|2... 262 5e-68 ref|XP_004144741.1| PREDICTED: trafficking protein particle comp... 258 1e-66 ref|XP_002534307.1| synbindin, putative [Ricinus communis] gi|22... 254 8e-66 ref|NP_001235954.1| uncharacterized protein LOC100305989 [Glycin... 254 1e-65 >ref|XP_002281149.1| PREDICTED: trafficking protein particle complex subunit 4 [Vitis vinifera] gi|147807581|emb|CAN66318.1| hypothetical protein VITISV_040622 [Vitis vinifera] gi|296089818|emb|CBI39637.3| unnamed protein product [Vitis vinifera] Length = 141 Score = 265 bits (677), Expect = 6e-69 Identities = 127/136 (93%), Positives = 133/136 (97%) Frame = +2 Query: 113 AAIFSLFIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTVGCSGIEL 292 AAI+SL+IINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPT+GCSGIEL Sbjct: 2 AAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTLGCSGIEL 61 Query: 293 LEADSFDLHCFQSLTGTKFFVVSEPGAQHMESLLKVIYELYTDYVLKNPFYEMEMPVRCE 472 LEAD+FDLHCFQSLTGTKFFVV EPG QHME LLKVIYELYTDYVLKNPFYEMEMP+RCE Sbjct: 62 LEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKVIYELYTDYVLKNPFYEMEMPIRCE 121 Query: 473 LFDINLSQAIQKDRVA 520 LFDINLSQA+QKDRVA Sbjct: 122 LFDINLSQAVQKDRVA 137 >ref|XP_002314001.1| predicted protein [Populus trichocarpa] gi|222850409|gb|EEE87956.1| predicted protein [Populus trichocarpa] Length = 141 Score = 262 bits (669), Expect = 5e-68 Identities = 126/136 (92%), Positives = 132/136 (97%) Frame = +2 Query: 113 AAIFSLFIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTVGCSGIEL 292 AAI+SL+IINKSGGLIFYKDYGS+GRMDTNDSLR+ASLWHSMHAISQQLSPTVGC GIEL Sbjct: 2 AAIYSLYIINKSGGLIFYKDYGSSGRMDTNDSLRVASLWHSMHAISQQLSPTVGCLGIEL 61 Query: 293 LEADSFDLHCFQSLTGTKFFVVSEPGAQHMESLLKVIYELYTDYVLKNPFYEMEMPVRCE 472 LEAD+FDLHCFQSLTGTKFFVV EPG QHME LLKVIYELYTDYVLKNPFYEMEMP+RCE Sbjct: 62 LEADTFDLHCFQSLTGTKFFVVCEPGTQHMEGLLKVIYELYTDYVLKNPFYEMEMPIRCE 121 Query: 473 LFDINLSQAIQKDRVA 520 LFDINLSQAIQKDRVA Sbjct: 122 LFDINLSQAIQKDRVA 137 >ref|XP_004144741.1| PREDICTED: trafficking protein particle complex subunit 4-like [Cucumis sativus] gi|449490796|ref|XP_004158709.1| PREDICTED: trafficking protein particle complex subunit 4-like [Cucumis sativus] Length = 141 Score = 258 bits (658), Expect = 1e-66 Identities = 122/136 (89%), Positives = 131/136 (96%) Frame = +2 Query: 113 AAIFSLFIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTVGCSGIEL 292 AAI+SL+IINKSGGLIFYKDYGSAGRMDTNDSLR+ASLWHSMHAISQQLSP GCSG+EL Sbjct: 2 AAIYSLYIINKSGGLIFYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVEL 61 Query: 293 LEADSFDLHCFQSLTGTKFFVVSEPGAQHMESLLKVIYELYTDYVLKNPFYEMEMPVRCE 472 LEAD+FDLHCFQSLTGTKFFVV EPG QHMESLLK IYELYTD+VLKNPFYEMEMP+RCE Sbjct: 62 LEADTFDLHCFQSLTGTKFFVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRCE 121 Query: 473 LFDINLSQAIQKDRVA 520 LFDINL+QA+QKDRVA Sbjct: 122 LFDINLAQAVQKDRVA 137 >ref|XP_002534307.1| synbindin, putative [Ricinus communis] gi|223525526|gb|EEF28075.1| synbindin, putative [Ricinus communis] Length = 141 Score = 254 bits (650), Expect = 8e-66 Identities = 121/136 (88%), Positives = 130/136 (95%) Frame = +2 Query: 113 AAIFSLFIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTVGCSGIEL 292 AAI+SL+IINKSGGLIFYKDYGS GRMDTNDSLR+ASLWHSMHAISQQLSP VGCSGIEL Sbjct: 2 AAIYSLYIINKSGGLIFYKDYGSGGRMDTNDSLRVASLWHSMHAISQQLSPVVGCSGIEL 61 Query: 293 LEADSFDLHCFQSLTGTKFFVVSEPGAQHMESLLKVIYELYTDYVLKNPFYEMEMPVRCE 472 L+AD+FDLHCFQSLTGTKFFVV EPG HME+LLKVIYELYTDYVLKNPFYEMEMP+RCE Sbjct: 62 LQADTFDLHCFQSLTGTKFFVVCEPGTPHMEALLKVIYELYTDYVLKNPFYEMEMPIRCE 121 Query: 473 LFDINLSQAIQKDRVA 520 LFDIN++Q IQKDRVA Sbjct: 122 LFDINVTQIIQKDRVA 137 >ref|NP_001235954.1| uncharacterized protein LOC100305989 [Glycine max] gi|255627205|gb|ACU13947.1| unknown [Glycine max] Length = 141 Score = 254 bits (649), Expect = 1e-65 Identities = 120/135 (88%), Positives = 130/135 (96%) Frame = +2 Query: 113 AAIFSLFIINKSGGLIFYKDYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTVGCSGIEL 292 AAI+SL+IINKSGGLI+YKDYGSAGRMDTNDSLR+ASLWHSMHAISQQLSP GC GIEL Sbjct: 2 AAIYSLYIINKSGGLIYYKDYGSAGRMDTNDSLRVASLWHSMHAISQQLSPVSGCLGIEL 61 Query: 293 LEADSFDLHCFQSLTGTKFFVVSEPGAQHMESLLKVIYELYTDYVLKNPFYEMEMPVRCE 472 L+AD+FDLHCFQSLTGTKFFVVSEPGAQHMESLLK +YELYTDYVLKNPFYEMEMP+RCE Sbjct: 62 LQADTFDLHCFQSLTGTKFFVVSEPGAQHMESLLKFVYELYTDYVLKNPFYEMEMPIRCE 121 Query: 473 LFDINLSQAIQKDRV 517 LFDINL+QA+QKD V Sbjct: 122 LFDINLTQAVQKDHV 136