BLASTX nr result

ID: Coptis23_contig00008677 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008677
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27927.3| unnamed protein product [Vitis vinifera]              318   1e-84
ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262...   318   1e-84
ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|2...   300   3e-79
ref|XP_002514143.1| conserved hypothetical protein [Ricinus comm...   291   8e-77
ref|XP_002867402.1| hypothetical protein ARALYDRAFT_491802 [Arab...   278   1e-72

>emb|CBI27927.3| unnamed protein product [Vitis vinifera]
          Length = 500

 Score =  318 bits (814), Expect = 1e-84
 Identities = 158/249 (63%), Positives = 196/249 (78%)
 Frame = +1

Query: 1   SFESTSKTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILLSHLTSGEGE 180
           +FES+SKT GLA +I  LC   G    G  F +LGLIEPW+ADDE AS+L+SHL+ G  E
Sbjct: 237 TFESSSKTGGLAVQIHELCLQRG----GDSFAILGLIEPWKADDEAASVLISHLSDGSEE 292

Query: 181 DILWQCQVLCAVILPKMLVLSGPASRVLVSATIEFCKLHQKASVNALLFPLLLCKDGINN 360
           ++ W  QV+C++ILPK+LVL  PASRVLV+ATIE+CKLHQ+A+V  LLFPLLL + GINN
Sbjct: 293 ELGWPSQVVCSIILPKLLVLEEPASRVLVTATIEYCKLHQRAAVYGLLFPLLLRRGGINN 352

Query: 361 PICEVVTRIIRECLHPAHASSFCQKLLSKEHERRRLVYLPCHQWLMTDELVWTESLFTLF 540
           PIC+VV RII+ECLHPAH S+F QKLL +E   R  + LPCHQ+L+++ELVWTESLF L 
Sbjct: 353 PICDVVVRIIKECLHPAHVSAFFQKLLCEEEHVRSFICLPCHQYLISNELVWTESLFNLL 412

Query: 541 QNILNHNVYLTQDTVDCLVSVVQQLDYEYSKSLKFGNFLLSLVTKCEAQVRSQKLLLTEA 720
           QNILNHNV+LTQD++D LV  VQ+L   +SKSLKFGNFLL LVTKC   ++S K+ LTEA
Sbjct: 413 QNILNHNVHLTQDSIDHLVYRVQELAEAFSKSLKFGNFLLCLVTKCSPFLKSYKISLTEA 472

Query: 721 IERTNTFMT 747
           +E TNT +T
Sbjct: 473 VEHTNTLVT 481


>ref|XP_002279729.1| PREDICTED: uncharacterized protein LOC100262802 [Vitis vinifera]
          Length = 491

 Score =  318 bits (814), Expect = 1e-84
 Identities = 158/249 (63%), Positives = 196/249 (78%)
 Frame = +1

Query: 1   SFESTSKTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILLSHLTSGEGE 180
           +FES+SKT GLA +I  LC   G    G  F +LGLIEPW+ADDE AS+L+SHL+ G  E
Sbjct: 237 TFESSSKTGGLAVQIHELCLQRG----GDSFAILGLIEPWKADDEAASVLISHLSDGSEE 292

Query: 181 DILWQCQVLCAVILPKMLVLSGPASRVLVSATIEFCKLHQKASVNALLFPLLLCKDGINN 360
           ++ W  QV+C++ILPK+LVL  PASRVLV+ATIE+CKLHQ+A+V  LLFPLLL + GINN
Sbjct: 293 ELGWPSQVVCSIILPKLLVLEEPASRVLVTATIEYCKLHQRAAVYGLLFPLLLRRGGINN 352

Query: 361 PICEVVTRIIRECLHPAHASSFCQKLLSKEHERRRLVYLPCHQWLMTDELVWTESLFTLF 540
           PIC+VV RII+ECLHPAH S+F QKLL +E   R  + LPCHQ+L+++ELVWTESLF L 
Sbjct: 353 PICDVVVRIIKECLHPAHVSAFFQKLLCEEEHVRSFICLPCHQYLISNELVWTESLFNLL 412

Query: 541 QNILNHNVYLTQDTVDCLVSVVQQLDYEYSKSLKFGNFLLSLVTKCEAQVRSQKLLLTEA 720
           QNILNHNV+LTQD++D LV  VQ+L   +SKSLKFGNFLL LVTKC   ++S K+ LTEA
Sbjct: 413 QNILNHNVHLTQDSIDHLVYRVQELAEAFSKSLKFGNFLLCLVTKCSPFLKSYKISLTEA 472

Query: 721 IERTNTFMT 747
           +E TNT +T
Sbjct: 473 VEHTNTLVT 481


>ref|XP_002308297.1| predicted protein [Populus trichocarpa] gi|222854273|gb|EEE91820.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  300 bits (767), Expect = 3e-79
 Identities = 147/251 (58%), Positives = 196/251 (78%), Gaps = 2/251 (0%)
 Frame = +1

Query: 1   SFESTSKTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILLSHLTSG--E 174
           +FES+SKT+ LA+EIRRL F         PFV+LGL+EPW+ADDETASIL+ HL++G  E
Sbjct: 232 TFESSSKTVELANEIRRLSFEREAD----PFVILGLLEPWKADDETASILVFHLSNGREE 287

Query: 175 GEDILWQCQVLCAVILPKMLVLSGPASRVLVSATIEFCKLHQKASVNALLFPLLLCKDGI 354
            E+I W  +VLC+++LPKMLVL  PASRVLV + +E+CKLHQ+A+  ALL PL++ + GI
Sbjct: 288 EEEIAWPSKVLCSIMLPKMLVLEEPASRVLVISMVEYCKLHQRAAECALLLPLIMKRSGI 347

Query: 355 NNPICEVVTRIIRECLHPAHASSFCQKLLSKEHERRRLVYLPCHQWLMTDELVWTESLFT 534
           NN +C+V+TRI++E LHPAH S+FC+KLL  +   +R + LPCHQ L++ +LVWTESLF 
Sbjct: 348 NNHMCDVITRIVKESLHPAHVSAFCRKLLCGQEVEKRSIILPCHQCLVSSQLVWTESLFN 407

Query: 535 LFQNILNHNVYLTQDTVDCLVSVVQQLDYEYSKSLKFGNFLLSLVTKCEAQVRSQKLLLT 714
           LFQNILNHNV LTQD+VD LV ++++L   +SKSLKFGNFLL  +T+C   ++S KLLL 
Sbjct: 408 LFQNILNHNVQLTQDSVDQLVLLIRELAPSFSKSLKFGNFLLCFITRCSLLLKSHKLLLV 467

Query: 715 EAIERTNTFMT 747
           EA+ +TNT +T
Sbjct: 468 EAVAKTNTLVT 478


>ref|XP_002514143.1| conserved hypothetical protein [Ricinus communis]
           gi|223546599|gb|EEF48097.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 493

 Score =  291 bits (746), Expect = 8e-77
 Identities = 148/249 (59%), Positives = 187/249 (75%), Gaps = 1/249 (0%)
 Frame = +1

Query: 4   FESTSKTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILLSHLTSG-EGE 180
           FES S+T+ LA+ IR+LC   G       F VLGL+EPW+ADDE AS+LL HL +G + +
Sbjct: 239 FESCSRTVELANVIRKLCLDKGVNS----FAVLGLVEPWKADDEIASVLLPHLLNGIDHK 294

Query: 181 DILWQCQVLCAVILPKMLVLSGPASRVLVSATIEFCKLHQKASVNALLFPLLLCKDGINN 360
           ++ W  QVL +VILPKML+L  PASR+LV+ATI++CKLHQ A+  ALLFPL++   GINN
Sbjct: 295 ELDWPSQVLSSVILPKMLILEEPASRMLVAATIDYCKLHQAAAEYALLFPLIMRTGGINN 354

Query: 361 PICEVVTRIIRECLHPAHASSFCQKLLSKEHERRRLVYLPCHQWLMTDELVWTESLFTLF 540
            +C+V+TRII+ECLHP H SSFCQKLL     ++R + LPCHQ L+++ELVWTESLF LF
Sbjct: 355 SLCDVMTRIIKECLHPVHVSSFCQKLLCGGASKKRFICLPCHQCLISNELVWTESLFNLF 414

Query: 541 QNILNHNVYLTQDTVDCLVSVVQQLDYEYSKSLKFGNFLLSLVTKCEAQVRSQKLLLTEA 720
            NILN N+ LTQD VD L   VQ+L   +SKSLKFGNFLL  +TKC   + S KLLLT+A
Sbjct: 415 HNILNLNIQLTQDLVDQLALRVQELAQMFSKSLKFGNFLLCFITKCSLLLMSHKLLLTKA 474

Query: 721 IERTNTFMT 747
            E+TNTF+T
Sbjct: 475 AEQTNTFVT 483


>ref|XP_002867402.1| hypothetical protein ARALYDRAFT_491802 [Arabidopsis lyrata subsp.
           lyrata] gi|297313238|gb|EFH43661.1| hypothetical protein
           ARALYDRAFT_491802 [Arabidopsis lyrata subsp. lyrata]
          Length = 493

 Score =  278 bits (710), Expect = 1e-72
 Identities = 140/248 (56%), Positives = 184/248 (74%), Gaps = 1/248 (0%)
 Frame = +1

Query: 7   ESTSKTIGLADEIRRLCFPDGKGGGGYPFVVLGLIEPWEADDETASILLSHLTSGEGEDI 186
           ESTS+ + L +EIR+LC   G+      F VL LIEPW ADDETA++LLS+L SG  ED 
Sbjct: 240 ESTSEVLTLCNEIRKLCLEKGRDS----FRVLALIEPWNADDETAAVLLSNLQSGSEEDE 295

Query: 187 L-WQCQVLCAVILPKMLVLSGPASRVLVSATIEFCKLHQKASVNALLFPLLLCKDGINNP 363
           L W  QVLC+++LPK + L   ASRVL+S+TIEFCK+HQ+A+  AL+FPL+L ++GINN 
Sbjct: 296 LGWPSQVLCSIVLPKFVSLEKSASRVLMSSTIEFCKIHQRAAEYALVFPLILRREGINNF 355

Query: 364 ICEVVTRIIRECLHPAHASSFCQKLLSKEHERRRLVYLPCHQWLMTDELVWTESLFTLFQ 543
           ICEV++R+++ECLH    S FCQKLL    E RR ++LPCH+ L++DEL+W ESLF LFQ
Sbjct: 356 ICEVISRVLKECLHLGQISGFCQKLLCGRTEERRFMFLPCHRELISDELIWNESLFILFQ 415

Query: 544 NILNHNVYLTQDTVDCLVSVVQQLDYEYSKSLKFGNFLLSLVTKCEAQVRSQKLLLTEAI 723
           NIL H+V L+QD+VDCLVS VQ+L   YSKSLKFGNFLL    K    +++ K  LTE++
Sbjct: 416 NILIHDVPLSQDSVDCLVSKVQELAERYSKSLKFGNFLLHFTAKFAPMLQAHKYQLTESV 475

Query: 724 ERTNTFMT 747
           + TN+ +T
Sbjct: 476 KCTNSLVT 483


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