BLASTX nr result

ID: Coptis23_contig00008674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008674
         (1553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316258.1| predicted protein [Populus trichocarpa] gi|2...   308   3e-81
ref|XP_002311191.1| predicted protein [Populus trichocarpa] gi|2...   296   1e-77
ref|XP_002524235.1| conserved hypothetical protein [Ricinus comm...   293   1e-76
ref|XP_001753053.1| predicted protein [Physcomitrella patens sub...   177   5e-42
ref|XP_001774096.1| predicted protein [Physcomitrella patens sub...   177   9e-42

>ref|XP_002316258.1| predicted protein [Populus trichocarpa] gi|222865298|gb|EEF02429.1|
            predicted protein [Populus trichocarpa]
          Length = 339

 Score =  308 bits (788), Expect = 3e-81
 Identities = 157/317 (49%), Positives = 215/317 (67%), Gaps = 2/317 (0%)
 Frame = +2

Query: 104  NYQKMLQTFKIFIYPTQQNQTSYTTTMEENFHSSLLESPYITTNPKEAHLFYLHVPPNSP 283
            +YQ ML +FKI+IY T  N  S+++  E NF + L  SP++T NP+EAHL+++    N  
Sbjct: 36   DYQNMLISFKIYIY-TPPNALSFSSPTESNFFTCLQNSPFVTQNPEEAHLYFVPFSSNLS 94

Query: 284  LKSISQLIKEVQTSFPFWNQALGADHFYIACEGVRYESKRSIVELKKNSIQISCFPSTQN 463
             +S+++ I++++  FP+WN+ LGADHFY++C G+ YES R++VELKKNS+QISCFP+T+ 
Sbjct: 95   TRSVARFIRDLRMEFPYWNRTLGADHFYVSCAGLGYESDRNLVELKKNSVQISCFPTTEG 154

Query: 464  RYIPHKDITLPPFHFPKELKPMKEIKYLGYAGYLNDLYSKNWTSSFIKELSGDPDFELDS 643
            R++PHKDIT PP       +  +  KYLG+  Y N++   N     + EL  D DF ++S
Sbjct: 155  RFVPHKDITFPP-----HAQGNRTAKYLGFVRY-NEVKESN----LVNELRKDSDFLIES 204

Query: 644  EPFDYDPSEG-LVSSKFCLFFYDIPVSIGGISEALRIGCVAVVISDRAITDLPFMDVLKW 820
            EP +     G L SS FCLF Y   VS  GI EALR GCV V++ DR + DLP MDV+ W
Sbjct: 205  EPSNGMTLVGRLGSSVFCLFEYGADVS--GIGEALRFGCVPVMVMDRPMQDLPLMDVIGW 262

Query: 821  SEIALFVGTSGGVKEVKKVLNGVC-SDKYQKMREKGMVASKHFQWYVSPQPYDAFHTLLY 997
             +IA+FVG+ GGVKEVK+ L+  C  D+    R  G+VAS+HF W   PQPYD+FH ++Y
Sbjct: 263  QKIAIFVGSRGGVKEVKRELDRTCKDDECAGRRRLGVVASQHFVWNHMPQPYDSFHMVMY 322

Query: 998  QLWVRRHTIRYARSEVV 1048
            QLW+RRH IRYAR E V
Sbjct: 323  QLWLRRHAIRYARREFV 339


>ref|XP_002311191.1| predicted protein [Populus trichocarpa] gi|222851011|gb|EEE88558.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  296 bits (758), Expect = 1e-77
 Identities = 153/324 (47%), Positives = 212/324 (65%), Gaps = 9/324 (2%)
 Frame = +2

Query: 104  NYQKMLQTFKIFIYPTQQNQTSYTTTMEENFHSSLLESPYITTNPKEAHLFYLHVPPNSP 283
            NYQ ML +FKI+IY T     S+++  E  F +SL  SP++T NP+EAHLF++    N  
Sbjct: 36   NYQNMLNSFKIYIY-TPSKPFSFSSPTESLFFTSLQASPFVTQNPEEAHLFFVPFASNLS 94

Query: 284  LKSISQLIKEVQTSFPFWNQALGADHFYIACEGVRYESKRSIVELKKNSIQISCFPSTQN 463
             +SI++ I++++  FP+WN+ LGADHFY++C G+ YES R++VELKKNS+QISCFP  + 
Sbjct: 95   TRSIARFIRDLRMEFPYWNRTLGADHFYVSCAGLGYESDRNLVELKKNSVQISCFPVPEG 154

Query: 464  RYIPHKDITLPPF-------HFPKELKPMKEIKYLGYAGYLNDLYSKNWTSSFIKELSGD 622
            +++PHKDI+LPP        H P      + ++YL   G + D       S    EL  D
Sbjct: 155  KFVPHKDISLPPLARITRASHAPGN----RTVRYLVRHGGVKD-------SKLANELRND 203

Query: 623  PDFELDSEPF-DYDPSEGLVSSKFCLFFYDIPVSIGGISEALRIGCVAVVISDRAITDLP 799
             DF ++SEP  +    E L SS FCLF  +    I GI EALR GCV V+++DR + DLP
Sbjct: 204  SDFLMESEPSNEMTLVERLGSSMFCLF--EDGADISGIGEALRFGCVPVMVTDRPMQDLP 261

Query: 800  FMDVLKWSEIALFVGTSGGVKEVKKVLNGVC-SDKYQKMREKGMVASKHFQWYVSPQPYD 976
             MDVL W +IA+FVG+ GG+KE+K+VL+  C  D+ +  R  G+ AS+HF W   PQPYD
Sbjct: 262  LMDVLSWQKIAVFVGSGGGIKEMKRVLDRTCKDDECEGTRRLGVAASQHFGWNEIPQPYD 321

Query: 977  AFHTLLYQLWVRRHTIRYARSEVV 1048
            +F+ ++YQLW+RRHTIRY R E V
Sbjct: 322  SFYMVVYQLWLRRHTIRYPRREFV 345


>ref|XP_002524235.1| conserved hypothetical protein [Ricinus communis]
            gi|223536512|gb|EEF38159.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 337

 Score =  293 bits (749), Expect = 1e-76
 Identities = 154/318 (48%), Positives = 212/318 (66%), Gaps = 5/318 (1%)
 Frame = +2

Query: 104  NYQKMLQTFKIFIYPTQQNQTSYTTTMEENFHSSLLESPYITTNPKEAHLFYLHVPPNSP 283
            NYQ+MLQ+FKI+ Y T     S+T+ +E  F +SL  S +IT NP++AHLF++  P +  
Sbjct: 38   NYQRMLQSFKIYTY-TPPQPFSFTSPVESLFFTSLQNSHFITLNPEQAHLFFIPFPSDLS 96

Query: 284  LKSISQLIKEVQTSFPFWNQALGADHFYIACEGVRYESKRSIVELKKNSIQISCFPSTQN 463
             +S++++I++++T FP+WN+ LGADHFYI+C G+ YES R++VELKKNS+QISCFPS   
Sbjct: 97   PRSLARVIRDLRTEFPYWNRTLGADHFYISCTGLGYESDRNLVELKKNSVQISCFPSPNG 156

Query: 464  RYIPHKDITLPPFHFPKEL--KPMKEIKYLGYAGYLNDLYSKNWTSSFIKELSGDPDFEL 637
            +++PHKDITLPP   P  +     K   Y  +  Y             ++EL GD +  +
Sbjct: 157  KFVPHKDITLPPL-VPSTIHKSSNKRRPYKAFVKY-----------DGVEELRGDLEVLI 204

Query: 638  DSEPFDYDPSEGLVSSKFCLFFYDIPVSIGGISEALRIGCVAVVISDRAITDLPFMDVLK 817
            +S+     PS+    S+FCLF  D   +I GI EAL  GCV +VI++R I DLP MDVL+
Sbjct: 205  ESQ-----PSDEKTRSEFCLF--DYAANISGIGEALSSGCVPLVITERPIQDLPLMDVLR 257

Query: 818  WSEIALFVGTS-GGVKEVKKVLNGVCS--DKYQKMREKGMVASKHFQWYVSPQPYDAFHT 988
            W EIA+ VG+S  G K VK+VLNG CS  D  ++MR  G  AS+H  W  +P+PYDAFH 
Sbjct: 258  WQEIAVIVGSSDDGFKWVKRVLNGTCSRGDTCERMRRLGAGASQHLVWNETPEPYDAFHM 317

Query: 989  LLYQLWVRRHTIRYARSE 1042
            ++YQLW+RRHTIRYAR E
Sbjct: 318  VMYQLWLRRHTIRYARRE 335


>ref|XP_001753053.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162695752|gb|EDQ82094.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 471

 Score =  177 bits (450), Expect = 5e-42
 Identities = 111/343 (32%), Positives = 173/343 (50%), Gaps = 32/343 (9%)
 Frame = +2

Query: 104  NYQKMLQTFKIFIYPTQQNQTSYT-------------TTMEENFHSSLLESPYITTNPKE 244
            +Y++M +  +I++YPTQ   T Y              ++  + F   L  S ++T   K 
Sbjct: 124  SYEEMREQLQIWVYPTQAGSTKYEHNYDGDEDVTEEISSTADLFFRLLTRSEFVTEKAKR 183

Query: 245  AHLFYL---------HVPPNSPLKSISQLIKEVQTSFPFWNQALGADHFYIACEGVRYES 397
            A LF L          + P    + + + +++V+T++P+W  +LGADHFY++C    + S
Sbjct: 184  AQLFLLPFSIDVLWVDLGPTQVAEKLRRYLEKVRTNYPYWESSLGADHFYLSCHAFEHNS 243

Query: 398  K-RSIVELKKNSIQISCFPSTQN-RYIPHKDITLPPFHFPKELKPMKEIKYLGYAGYLND 571
            K R+I+EL KNSIQ +C P   N ++ PHKD+  P +    E    + I  LG     + 
Sbjct: 244  KHRNILELGKNSIQAACAPLRHNQKFYPHKDVVFPQYKPVGEEDVRQAI--LGRRNRTSL 301

Query: 572  LYSKNWTSSFIKELSG------DPDFELDSEPFDYDPS--EGLVSSKFCLFFYDIPVSIG 727
             Y           LS       DPDF +++ P  +  S    L  S+FC+    +P    
Sbjct: 302  AYFSGCPDVTTPLLSAFHTWETDPDFIVEANPSPHRLSVYRNLARSRFCVSV--LPHDTF 359

Query: 728  GISEALRIGCVAVVISDRAITDLPFMDVLKWSEIALFVGTSGGVKEVKKVLNGVCSDKYQ 907
             + +ALR GCV V++S     DLPF   L W + A+ +G    +  +K++L  V S K++
Sbjct: 360  SLVDALRFGCVPVLLSKLTFHDLPFQGFLNWGQFAVVLGIED-LPNLKQILANVSSTKHR 418

Query: 908  KMREKGMVASKHFQWYVSPQPYDAFHTLLYQLWVRRHTIRYAR 1036
            +M+  G  A KH +W   P  YDAFH  L +LWVRRH+I+Y R
Sbjct: 419  EMQYLGHQAIKHLEWNNPPVAYDAFHMTLLELWVRRHSIKYTR 461


>ref|XP_001774096.1| predicted protein [Physcomitrella patens subsp. patens]
            gi|162674642|gb|EDQ61148.1| predicted protein
            [Physcomitrella patens subsp. patens]
          Length = 351

 Score =  177 bits (448), Expect = 9e-42
 Identities = 109/346 (31%), Positives = 187/346 (54%), Gaps = 37/346 (10%)
 Frame = +2

Query: 104  NYQKMLQTFKIFIYPTQQNQ--TSY----------------TTTMEENFHSSLLESP-YI 226
            NY  M +  +I++YP  QN   T Y                T++  + F + L+ES  ++
Sbjct: 13   NYNDMAKNLRIYLYPASQNYNFTQYEYGMNPSEMVSELGVETSSTTDTFFNLLVESKRFV 72

Query: 227  TTNPKEAHLFYLHVP---------PNSPLKSISQLIKEVQTSFPFWNQALGADHFYIACE 379
            T +   AHL++L +          P    + +   ++ ++ ++  W+ +LGADHFY +  
Sbjct: 73   TDDADGAHLYFLPISIDRVWAAVGPAKVGEHLRHYLQWLRNTYKLWDLSLGADHFYFSSH 132

Query: 380  GVRYESKRSIVELKKNSIQISCFPSTQNR-YIPHKDITLPPFHFPKELKPMKEIKYLGYA 556
                 + R+ +EL KN+IQ++  P  +N+ + PHKDI+LP +    + + + E++ L  A
Sbjct: 133  AYDPINHRNNLELTKNAIQVASSPLRRNQNFFPHKDISLPSY----KSQHIAEVQNLVGA 188

Query: 557  GYLNDLYSKNW--------TSSFIKELSGDPDFELDSEPFDYDPSEGLVSSKFCLFFYDI 712
                 L   +          +S I++ + D DF ++S      P E L+SS+FC+     
Sbjct: 189  SQRPKLVFVSSPPEDIDPIVASVIQKWTSDSDFHVESADQPSPPFEKLLSSRFCVSVS-- 246

Query: 713  PVSIGGISEALRIGCVAVVISDRAITDLPFMDVLKWSEIALFVGTSGGVKEVKKVLNGVC 892
            P ++  + ++LR+GCV V+I+D  I DLPF DVL W E ++ +G       +K +L+ + 
Sbjct: 247  PQAMLNVVDSLRLGCVPVLIADSIIYDLPFQDVLNWKEFSVVLGVKES-PNLKTLLSSIS 305

Query: 893  SDKYQKMREKGMVASKHFQWYVSPQPYDAFHTLLYQLWVRRHTIRY 1030
            +D+Y+KM+  G  ASKH +W   P+P+DAFH  L++LWVRRH+I+Y
Sbjct: 306  TDEYRKMQYLGHQASKHMEWNDPPKPWDAFHMTLHELWVRRHSIKY 351


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