BLASTX nr result

ID: Coptis23_contig00008673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008673
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522974.1| transporter, putative [Ricinus communis] gi|...   329   5e-88
ref|XP_002316993.1| predicted protein [Populus trichocarpa] gi|2...   326   6e-87
ref|XP_002281212.1| PREDICTED: uncharacterized protein LOC100257...   325   7e-87
ref|XP_003532118.1| PREDICTED: uncharacterized protein LOC100781...   316   6e-84
ref|NP_200297.2| major facilitator protein [Arabidopsis thaliana...   316   6e-84

>ref|XP_002522974.1| transporter, putative [Ricinus communis]
           gi|223537786|gb|EEF39404.1| transporter, putative
           [Ricinus communis]
          Length = 497

 Score =  329 bits (844), Expect = 5e-88
 Identities = 185/316 (58%), Positives = 223/316 (70%), Gaps = 5/316 (1%)
 Frame = -1

Query: 934 LACLFGLFHPGFQIFCMDSSFIPAQGQA*LSPSASQLLFSVAFFPWSIKPLYGILSDCIP 755
           L CL   F  GF+ F   +     + +  LSPSASQ + SVAFFPWSIKPLYGI+SDCIP
Sbjct: 19  LICLI-YFTQGFRSFVWTAVSYHLKDRLKLSPSASQFVSSVAFFPWSIKPLYGIVSDCIP 77

Query: 754 IKGKKRIPYLVISTVLSLFPWLILGLKASLRSSHGSLMIFLTAQNLGSAMADVVIDXXXX 575
           IKG+KRIPYLVI+TVLSL PW +LGLK++LRSS   L+I LT QNLGSAMADVV+D    
Sbjct: 78  IKGRKRIPYLVIATVLSLVPWPVLGLKSTLRSSRWHLIILLTVQNLGSAMADVVVDAMIA 137

Query: 574 XXXXXXXXXXAGDLQSLSWSAMALGGICGSLLGGYALSNLQIDTIFLLFSVLPSIQLLSC 395
                     AGDLQS+SW +MA+GG+CGSL GGYAL++LQIDTIFLLFSVLP+IQLLSC
Sbjct: 138 EAVRFERASFAGDLQSISWLSMAVGGVCGSLFGGYALTSLQIDTIFLLFSVLPAIQLLSC 197

Query: 394 GLVKEDYLGSKVQLELAN--SNSHQENGSGSISDTELNIAIDS-KATLXXXXXXXXXKTR 224
           G V+E+ +GSKV  E A+  S+SH ENG+G + D +  +A  S ++T            R
Sbjct: 198 GFVEENSVGSKVLPEFASSTSSSHLENGNGVLLDEDSFLAKKSNRSTSRRKRSQKNNIKR 257

Query: 223 QDKTTKFE--EKDGLLGVQLFQSIKSATYSLCRAFKQPIILRPMAWFFLAQVTFPNLSTV 50
            D ++     EK   L +    S+K+A+YSL  AF+QPIILRPMAWFFLA VT PNLSTV
Sbjct: 258 IDISSNSHNLEKGNSLALGWLHSLKAASYSLLHAFRQPIILRPMAWFFLAHVTMPNLSTV 317

Query: 49  MFYYHTEFLNLDPSFL 2
           MFYY TE LNLD SFL
Sbjct: 318 MFYYQTEALNLDASFL 333



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -2

Query: 933 WLVCLVYFTQGFRSFVWTAVSYQLKDRL 850
           WL+CL+YFTQGFRSFVWTAVSY LKDRL
Sbjct: 18  WLICLIYFTQGFRSFVWTAVSYHLKDRL 45


>ref|XP_002316993.1| predicted protein [Populus trichocarpa] gi|222860058|gb|EEE97605.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score =  326 bits (835), Expect = 6e-87
 Identities = 187/316 (59%), Positives = 217/316 (68%), Gaps = 5/316 (1%)
 Frame = -1

Query: 934 LACLFGLFHPGFQIFCMDSSFIPAQGQA*LSPSASQLLFSVAFFPWSIKPLYGILSDCIP 755
           L CL   F  GF+ F   +     +    LSPSASQ + S+AFFPWSIKPLYGILSDCIP
Sbjct: 19  LICLI-YFTQGFRSFVWTAVSYQLKDNLKLSPSASQFVSSIAFFPWSIKPLYGILSDCIP 77

Query: 754 IKGKKRIPYLVISTVLSLFPWLILGLKASLRSSHGSLMIFLTAQNLGSAMADVVIDXXXX 575
           IKG+KRIPYLVI+T+LSL PW +LG+ ++LRSS   L + LT QNLGSAMADVV+D    
Sbjct: 78  IKGRKRIPYLVIATLLSLVPWPMLGIDSNLRSSQWHLTVLLTVQNLGSAMADVVVDAMIA 137

Query: 574 XXXXXXXXXXAGDLQSLSWSAMALGGICGSLLGGYALSNLQIDTIFLLFSVLPSIQLLSC 395
                     AGDLQS+SW +MA+GGI GSLLGGYAL+NLQID IFLLFSVLP+IQLLSC
Sbjct: 138 EAVRSERASFAGDLQSISWLSMAVGGIWGSLLGGYALTNLQIDKIFLLFSVLPAIQLLSC 197

Query: 394 GLVKEDYLGSKVQLELAN-SNSHQENGSGSISDTELNIAI--DSKATLXXXXXXXXXKTR 224
           GLV E+   SKV  + AN SNSH  NG+G+I D E NI +   S +             R
Sbjct: 198 GLVGENSADSKVSHDSANSSNSHPVNGNGNILD-EDNILLKKSSASATRRKRSQKNGNKR 256

Query: 223 QDKTTK--FEEKDGLLGVQLFQSIKSATYSLCRAFKQPIILRPMAWFFLAQVTFPNLSTV 50
               TK    EK   L    F S+K+ATYSL RAF+QP+ILRPMAWFFLAQ+T PNLSTV
Sbjct: 257 ASMRTKSLIPEKGNSLISHWFHSLKTATYSLLRAFRQPVILRPMAWFFLAQITVPNLSTV 316

Query: 49  MFYYHTEFLNLDPSFL 2
           MFYY TE LNLD SFL
Sbjct: 317 MFYYQTEVLNLDASFL 332



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 25/28 (89%), Positives = 27/28 (96%)
 Frame = -2

Query: 933 WLVCLVYFTQGFRSFVWTAVSYQLKDRL 850
           WL+CL+YFTQGFRSFVWTAVSYQLKD L
Sbjct: 18  WLICLIYFTQGFRSFVWTAVSYQLKDNL 45


>ref|XP_002281212.1| PREDICTED: uncharacterized protein LOC100257271 [Vitis vinifera]
           gi|297737407|emb|CBI26608.3| unnamed protein product
           [Vitis vinifera]
          Length = 496

 Score =  325 bits (834), Expect = 7e-87
 Identities = 179/315 (56%), Positives = 217/315 (68%), Gaps = 4/315 (1%)
 Frame = -1

Query: 934 LACLFGLFHPGFQIFCMDSSFIPAQGQA*LSPSASQLLFSVAFFPWSIKPLYGILSDCIP 755
           L CL   F  GF+ F   +     + +  LSPSASQ ++S+A FPWSIKPLYGILSDCIP
Sbjct: 19  LICLI-YFTQGFRTFVWTAVSYQLKDRLKLSPSASQFVYSIAIFPWSIKPLYGILSDCIP 77

Query: 754 IKGKKRIPYLVISTVLSLFPWLILGLKASLRSSHGSLMIFLTAQNLGSAMADVVIDXXXX 575
           I G+KRIPYLV++++ SLFPWL+LGL A L  S   LMI LT QNLGSAMADVV+D    
Sbjct: 78  IGGRKRIPYLVVASIFSLFPWLVLGLNAPLMDSKVHLMISLTVQNLGSAMADVVVDAMIA 137

Query: 574 XXXXXXXXXXAGDLQSLSWSAMALGGICGSLLGGYALSNLQIDTIFLLFSVLPSIQLLSC 395
                      GDLQSLSW AMA+GGICGSLLGGYAL+N++I  IFLLFS+LPSIQLLSC
Sbjct: 138 EAVRFERAAFTGDLQSLSWLAMAIGGICGSLLGGYALTNIEIGQIFLLFSLLPSIQLLSC 197

Query: 394 GLVKEDYLGSKVQLELANSNSHQ-ENGSGSISDTELNIAIDSKATLXXXXXXXXXKTRQ- 221
           GLVKE+ LGSK   EL+NS S Q  NG  ++ D + + +  S+ +          K ++ 
Sbjct: 198 GLVKENPLGSKFLPELSNSGSSQIVNGDNNVLDEDSSNSERSRISTSRRKKRRTNKKKRV 257

Query: 220 --DKTTKFEEKDGLLGVQLFQSIKSATYSLCRAFKQPIILRPMAWFFLAQVTFPNLSTVM 47
                ++  EKDG L +Q F ++K A  SL  AF+QPIILRPMAWFFLA V+ PNLSTVM
Sbjct: 258 VIKSKSQISEKDGSLALQWFHTLKMAACSLYSAFRQPIILRPMAWFFLAHVSVPNLSTVM 317

Query: 46  FYYHTEFLNLDPSFL 2
           FYY TEFLNL+ SFL
Sbjct: 318 FYYQTEFLNLEASFL 332



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = -2

Query: 933 WLVCLVYFTQGFRSFVWTAVSYQLKDRL 850
           WL+CL+YFTQGFR+FVWTAVSYQLKDRL
Sbjct: 18  WLICLIYFTQGFRTFVWTAVSYQLKDRL 45


>ref|XP_003532118.1| PREDICTED: uncharacterized protein LOC100781251 [Glycine max]
          Length = 493

 Score =  316 bits (809), Expect = 6e-84
 Identities = 177/312 (56%), Positives = 206/312 (66%), Gaps = 1/312 (0%)
 Frame = -1

Query: 934 LACLFGLFHPGFQIFCMDSSFIPAQGQA*LSPSASQLLFSVAFFPWSIKPLYGILSDCIP 755
           L C+   F  GF+ F   S     +    LSPSASQ +FSVAFFPWSIKPLYGILSDCIP
Sbjct: 19  LICMI-YFTQGFRSFVWTSISYQLKDNLKLSPSASQFVFSVAFFPWSIKPLYGILSDCIP 77

Query: 754 IKGKKRIPYLVISTVLSLFPWLILGLKASLRSSHGSLMIFLTAQNLGSAMADVVIDXXXX 575
           IKG+KRIPYLVI+TVLSL PW ILGL ++LR S   LM+ LTAQNLGSAMADVV+D    
Sbjct: 78  IKGRKRIPYLVIATVLSLVPWFILGLSSTLRDSTWHLMVLLTAQNLGSAMADVVVDAMIA 137

Query: 574 XXXXXXXXXXAGDLQSLSWSAMALGGICGSLLGGYALSNLQIDTIFLLFSVLPSIQLLSC 395
                     AGDLQS+SWS+MALGGICGSLLGGYALSNLQIDTIFLLF VLP IQLLSC
Sbjct: 138 EAVRYERASFAGDLQSISWSSMALGGICGSLLGGYALSNLQIDTIFLLFCVLPCIQLLSC 197

Query: 394 GLVKEDYLGSKVQLELANSNSHQENGSGSISDTELNIAIDSKATLXXXXXXXXXKTRQDK 215
             V+E+   SK + E +       NGS    D+ L     S                 + 
Sbjct: 198 CFVEENSENSKAEPEDSIVRDSHMNGSTLDEDSPLTKKSHSSTRRRKKGKKNAKGRAVNS 257

Query: 214 T-TKFEEKDGLLGVQLFQSIKSATYSLCRAFKQPIILRPMAWFFLAQVTFPNLSTVMFYY 38
           + +K  +K   L ++ F S+K A Y LCRAF+QP+I RPM+WFFLA VT PNLSTV+FYY
Sbjct: 258 SKSKIYKKGDSLALKWFHSLKEAIYDLCRAFRQPMIWRPMSWFFLAHVTIPNLSTVIFYY 317

Query: 37  HTEFLNLDPSFL 2
            TE L L+ SFL
Sbjct: 318 ETEVLKLEASFL 329



 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 30/68 (44%), Positives = 35/68 (51%)
 Frame = -2

Query: 933 WLVCLVYFTQGFRSFVWTAVSYQLKDRLNCHHLLPSFYFQ*RFSHGVSNHFMEFCQIAFL 754
           WL+C++YFTQGFRSFVWT++SYQLKD L        F F   F                 
Sbjct: 18  WLICMIYFTQGFRSFVWTSISYQLKDNLKLSPSASQFVFSVAFFPWSIKPLYGILSDCIP 77

Query: 753 SKGRKGFP 730
            KGRK  P
Sbjct: 78  IKGRKRIP 85


>ref|NP_200297.2| major facilitator protein [Arabidopsis thaliana]
           gi|75158734|sp|Q8RWQ5.1|FBT4_ARATH RecName:
           Full=Probable folate-biopterin transporter 4
           gi|20147215|gb|AAM10323.1| AT5g54860/MBG8_12
           [Arabidopsis thaliana] gi|332009167|gb|AED96550.1| major
           facilitator protein [Arabidopsis thaliana]
          Length = 491

 Score =  316 bits (809), Expect = 6e-84
 Identities = 176/311 (56%), Positives = 211/311 (67%)
 Frame = -1

Query: 934 LACLFGLFHPGFQIFCMDSSFIPAQGQA*LSPSASQLLFSVAFFPWSIKPLYGILSDCIP 755
           L CL   F  GF+ F   +     + +  LSPSASQ +FSVAFFPWSIKPLYGI+SDCIP
Sbjct: 19  LVCLI-YFTQGFRSFVWTAVSYQLKDRLQLSPSASQFVFSVAFFPWSIKPLYGIISDCIP 77

Query: 754 IKGKKRIPYLVISTVLSLFPWLILGLKASLRSSHGSLMIFLTAQNLGSAMADVVIDXXXX 575
           I GKKR PYLVISTVLSL PWL+LGL ++ RSS   LMIFLT QNLGSAMADVVID    
Sbjct: 78  IGGKKRTPYLVISTVLSLVPWLVLGLDSTSRSSSLYLMIFLTVQNLGSAMADVVIDAMIA 137

Query: 574 XXXXXXXXXXAGDLQSLSWSAMALGGICGSLLGGYALSNLQIDTIFLLFSVLPSIQLLSC 395
                     AGDLQS+SW AMA+GG+CGSLLGGYALSNL+I+TIFLLF+VLP++QLLSC
Sbjct: 138 EAVRLEKASFAGDLQSVSWFAMAVGGVCGSLLGGYALSNLKIETIFLLFTVLPALQLLSC 197

Query: 394 GLVKEDYLGSKVQLELANSNSHQENGSGSISDTELNIAIDSKATLXXXXXXXXXKTRQDK 215
            LV+E    ++   EL +SN  +E    S  +       +++               + +
Sbjct: 198 ALVEESPANNEPLPELLDSNEFEEKSLTSNDNYPDTSKSNTRRRKGQKKGKKGDSNGKSE 257

Query: 214 TTKFEEKDGLLGVQLFQSIKSATYSLCRAFKQPIILRPMAWFFLAQVTFPNLSTVMFYYH 35
           T K + K   L  Q FQS+K+AT+ L RAFKQPIILRPMAWFF+A +T PNLSTVMFYY 
Sbjct: 258 TQKKQSKS--LASQWFQSLKAATFGLGRAFKQPIILRPMAWFFIAHITVPNLSTVMFYYQ 315

Query: 34  TEFLNLDPSFL 2
           TE L LD +FL
Sbjct: 316 TEVLQLDAAFL 326



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 30/43 (69%), Positives = 31/43 (72%)
 Frame = -2

Query: 933 WLVCLVYFTQGFRSFVWTAVSYQLKDRLNCHHLLPSFYFQ*RF 805
           WLVCL+YFTQGFRSFVWTAVSYQLKDRL        F F   F
Sbjct: 18  WLVCLIYFTQGFRSFVWTAVSYQLKDRLQLSPSASQFVFSVAF 60


Top