BLASTX nr result

ID: Coptis23_contig00008659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008659
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004164091.1| PREDICTED: B3 domain-containing transcriptio...    62   6e-08
ref|XP_004145348.1| PREDICTED: B3 domain-containing transcriptio...    62   6e-08
ref|XP_003602766.1| B3 domain-containing protein [Medicago trunc...    60   1e-07
ref|XP_003517920.1| PREDICTED: B3 domain-containing transcriptio...    60   2e-07
ref|XP_003622675.1| B3 domain-containing transcription factor VR...    59   5e-07

>ref|XP_004164091.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Cucumis sativus]
          Length = 375

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = -1

Query: 251 EVTLLASNGATWHAQYT--GLRHKLTRGWKAFALDNDLKVDDLCIFELVDQKRITLKVTI 78
           ++TL  S+G  W  +    G   KLTRGW  F +DNDLK +D+C+FEL++ K I ++VT+
Sbjct: 306 DITLQVSSGKQWRVRCIREGPGTKLTRGWADFVVDNDLKEEDVCVFELINMKDIVMQVTV 365

Query: 77  IR 72
            R
Sbjct: 366 FR 367


>ref|XP_004145348.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Cucumis sativus] gi|449471263|ref|XP_004153258.1|
           PREDICTED: B3 domain-containing transcription factor
           VRN1-like [Cucumis sativus]
          Length = 417

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
 Frame = -1

Query: 251 EVTLLASNGATWHAQYT--GLRHKLTRGWKAFALDNDLKVDDLCIFELVDQKRITLKVTI 78
           ++TL  S+G  W  +    G   KLTRGW  F +DNDLK +D+C+FEL++ K I ++VT+
Sbjct: 348 DITLQVSSGKQWRVRCIREGPGTKLTRGWADFVVDNDLKEEDVCVFELINMKDIVMQVTV 407

Query: 77  IR 72
            R
Sbjct: 408 FR 409


>ref|XP_003602766.1| B3 domain-containing protein [Medicago truncatula]
           gi|355491814|gb|AES73017.1| B3 domain-containing protein
           [Medicago truncatula]
          Length = 328

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 6/62 (9%)
 Frame = -1

Query: 233 SNGATWHAQY------TGLRHKLTRGWKAFALDNDLKVDDLCIFELVDQKRITLKVTIIR 72
           SNG  W A+Y      TGLR +L+ GWK FA DN+LKV D C FEL+    +T +V I R
Sbjct: 240 SNGRVWPAKYRIRMSHTGLRFELSSGWKTFAKDNNLKVGDACNFELILSTNMTFQVHIFR 299

Query: 71  HT 66
            T
Sbjct: 300 ET 301


>ref|XP_003517920.1| PREDICTED: B3 domain-containing transcription factor VRN1-like
           [Glycine max]
          Length = 318

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
 Frame = -1

Query: 251 EVTLLASNGATWHAQY------TGLRHKLTRGWKAFALDNDLKVDDLCIFELVDQKRITL 90
           ++ L   NG  WHA+Y      T  R +L+ GWK FA DN+LKV D+C FEL+   ++T 
Sbjct: 237 DINLEVLNGRVWHARYRIRTAETRRRFELSSGWKTFAEDNNLKVGDVCTFELIPATKLTF 296

Query: 89  KVTIIR 72
           +V I R
Sbjct: 297 QVHIFR 302


>ref|XP_003622675.1| B3 domain-containing transcription factor VRN1 [Medicago
           truncatula] gi|355497690|gb|AES78893.1| B3
           domain-containing transcription factor VRN1 [Medicago
           truncatula]
          Length = 341

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 8/70 (11%)
 Frame = -1

Query: 251 EVTLLASNGATWHAQYT--------GLRHKLTRGWKAFALDNDLKVDDLCIFELVDQKRI 96
           ++ L A NG  W A+Y+        G+R +LT GW+ FA DN+LKV D+C FEL+    +
Sbjct: 240 DIQLQALNGRVWSARYSTRNRTSDNGIRFELTSGWEEFAKDNNLKVGDVCKFELISSTIL 299

Query: 95  TLKVTIIRHT 66
           T  V + R T
Sbjct: 300 TFIVHVFRET 309


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