BLASTX nr result
ID: Coptis23_contig00008659
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00008659 (266 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004164091.1| PREDICTED: B3 domain-containing transcriptio... 62 6e-08 ref|XP_004145348.1| PREDICTED: B3 domain-containing transcriptio... 62 6e-08 ref|XP_003602766.1| B3 domain-containing protein [Medicago trunc... 60 1e-07 ref|XP_003517920.1| PREDICTED: B3 domain-containing transcriptio... 60 2e-07 ref|XP_003622675.1| B3 domain-containing transcription factor VR... 59 5e-07 >ref|XP_004164091.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis sativus] Length = 375 Score = 61.6 bits (148), Expect = 6e-08 Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 2/62 (3%) Frame = -1 Query: 251 EVTLLASNGATWHAQYT--GLRHKLTRGWKAFALDNDLKVDDLCIFELVDQKRITLKVTI 78 ++TL S+G W + G KLTRGW F +DNDLK +D+C+FEL++ K I ++VT+ Sbjct: 306 DITLQVSSGKQWRVRCIREGPGTKLTRGWADFVVDNDLKEEDVCVFELINMKDIVMQVTV 365 Query: 77 IR 72 R Sbjct: 366 FR 367 >ref|XP_004145348.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis sativus] gi|449471263|ref|XP_004153258.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Cucumis sativus] Length = 417 Score = 61.6 bits (148), Expect = 6e-08 Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 2/62 (3%) Frame = -1 Query: 251 EVTLLASNGATWHAQYT--GLRHKLTRGWKAFALDNDLKVDDLCIFELVDQKRITLKVTI 78 ++TL S+G W + G KLTRGW F +DNDLK +D+C+FEL++ K I ++VT+ Sbjct: 348 DITLQVSSGKQWRVRCIREGPGTKLTRGWADFVVDNDLKEEDVCVFELINMKDIVMQVTV 407 Query: 77 IR 72 R Sbjct: 408 FR 409 >ref|XP_003602766.1| B3 domain-containing protein [Medicago truncatula] gi|355491814|gb|AES73017.1| B3 domain-containing protein [Medicago truncatula] Length = 328 Score = 60.5 bits (145), Expect = 1e-07 Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 6/62 (9%) Frame = -1 Query: 233 SNGATWHAQY------TGLRHKLTRGWKAFALDNDLKVDDLCIFELVDQKRITLKVTIIR 72 SNG W A+Y TGLR +L+ GWK FA DN+LKV D C FEL+ +T +V I R Sbjct: 240 SNGRVWPAKYRIRMSHTGLRFELSSGWKTFAKDNNLKVGDACNFELILSTNMTFQVHIFR 299 Query: 71 HT 66 T Sbjct: 300 ET 301 >ref|XP_003517920.1| PREDICTED: B3 domain-containing transcription factor VRN1-like [Glycine max] Length = 318 Score = 60.1 bits (144), Expect = 2e-07 Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 6/66 (9%) Frame = -1 Query: 251 EVTLLASNGATWHAQY------TGLRHKLTRGWKAFALDNDLKVDDLCIFELVDQKRITL 90 ++ L NG WHA+Y T R +L+ GWK FA DN+LKV D+C FEL+ ++T Sbjct: 237 DINLEVLNGRVWHARYRIRTAETRRRFELSSGWKTFAEDNNLKVGDVCTFELIPATKLTF 296 Query: 89 KVTIIR 72 +V I R Sbjct: 297 QVHIFR 302 >ref|XP_003622675.1| B3 domain-containing transcription factor VRN1 [Medicago truncatula] gi|355497690|gb|AES78893.1| B3 domain-containing transcription factor VRN1 [Medicago truncatula] Length = 341 Score = 58.5 bits (140), Expect = 5e-07 Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 8/70 (11%) Frame = -1 Query: 251 EVTLLASNGATWHAQYT--------GLRHKLTRGWKAFALDNDLKVDDLCIFELVDQKRI 96 ++ L A NG W A+Y+ G+R +LT GW+ FA DN+LKV D+C FEL+ + Sbjct: 240 DIQLQALNGRVWSARYSTRNRTSDNGIRFELTSGWEEFAKDNNLKVGDVCKFELISSTIL 299 Query: 95 TLKVTIIRHT 66 T V + R T Sbjct: 300 TFIVHVFRET 309