BLASTX nr result

ID: Coptis23_contig00008636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008636
         (550 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30860.3| unnamed protein product [Vitis vinifera]              172   4e-41
ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   172   4e-41
ref|XP_003547209.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   156   2e-36
ref|XP_003541661.1| PREDICTED: phospho-N-acetylmuramoyl-pentapep...   155   4e-36
ref|XP_002532536.1| phospho-n-acetylmuramoyl-pentapeptide-transf...   151   8e-35

>emb|CBI30860.3| unnamed protein product [Vitis vinifera]
          Length = 689

 Score =  172 bits (435), Expect = 4e-41
 Identities = 78/148 (52%), Positives = 106/148 (71%)
 Frame = +2

Query: 17  SSSGEESDADVVLNPIGDVDLPSTNERFESSDGALAVTAHRFGMLRRRGKTNRIQTGNII 196
           SS  E+SD ++++NP+ D+DL ++NER  SS+ AL + AHRF M+ +  K NRI+ G ++
Sbjct: 105 SSDSEDSDGEIIINPVSDIDLATSNERLVSSNDALTMAAHRFAMIGKGRKKNRIKYGILV 164

Query: 197 NAGXXXXXXXXXXXXDWCSWRIVRLPLAPFYLSRPFLVSAVLASLAGYLCIPILNNLRIH 376
           NAG            D C+WRIVRLPL PFYL+RPF +S VL S  GY+C+P+L+ L++H
Sbjct: 165 NAGLITFLTMLLLLVDSCAWRIVRLPLEPFYLTRPFFISTVLVSGVGYICVPLLHGLKMH 224

Query: 377 QTIRKEGPRIHSLKKGTPTMGGLFFIPI 460
           Q +RKEGP  HS K+ TPTMGGLFF+PI
Sbjct: 225 QLLRKEGPVRHSSKRRTPTMGGLFFVPI 252


>ref|XP_002273074.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Vitis vinifera]
          Length = 545

 Score =  172 bits (435), Expect = 4e-41
 Identities = 78/148 (52%), Positives = 106/148 (71%)
 Frame = +2

Query: 17  SSSGEESDADVVLNPIGDVDLPSTNERFESSDGALAVTAHRFGMLRRRGKTNRIQTGNII 196
           SS  E+SD ++++NP+ D+DL ++NER  SS+ AL + AHRF M+ +  K NRI+ G ++
Sbjct: 128 SSDSEDSDGEIIINPVSDIDLATSNERLVSSNDALTMAAHRFAMIGKGRKKNRIKYGILV 187

Query: 197 NAGXXXXXXXXXXXXDWCSWRIVRLPLAPFYLSRPFLVSAVLASLAGYLCIPILNNLRIH 376
           NAG            D C+WRIVRLPL PFYL+RPF +S VL S  GY+C+P+L+ L++H
Sbjct: 188 NAGLITFLTMLLLLVDSCAWRIVRLPLEPFYLTRPFFISTVLVSGVGYICVPLLHGLKMH 247

Query: 377 QTIRKEGPRIHSLKKGTPTMGGLFFIPI 460
           Q +RKEGP  HS K+ TPTMGGLFF+PI
Sbjct: 248 QLLRKEGPVRHSSKRRTPTMGGLFFVPI 275


>ref|XP_003547209.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Glycine max]
          Length = 510

 Score =  156 bits (395), Expect = 2e-36
 Identities = 75/152 (49%), Positives = 100/152 (65%)
 Frame = +2

Query: 5   FYIMSSSGEESDADVVLNPIGDVDLPSTNERFESSDGALAVTAHRFGMLRRRGKTNRIQT 184
           + + SS GE+SD ++ L P+ D+DLPS +    S++ AL V AHRF  L R  K +R + 
Sbjct: 92  YKLSSSDGEDSDGEIFLTPVNDLDLPSVSA---SNNDALTVAAHRFANLGRGRKKSRTKL 148

Query: 185 GNIINAGXXXXXXXXXXXXDWCSWRIVRLPLAPFYLSRPFLVSAVLASLAGYLCIPILNN 364
           G  I  G            DWC+WRIVRLPL+PFYL+RPFL+SA+LAS AGY+C+PI  +
Sbjct: 149 GIFITLGLIIVLTLLLLYVDWCAWRIVRLPLSPFYLTRPFLISAILASFAGYVCVPIFRH 208

Query: 365 LRIHQTIRKEGPRIHSLKKGTPTMGGLFFIPI 460
            +I   I+K+GP  H +KK  PT+GGL FIPI
Sbjct: 209 FKIIHVIKKQGPARHHMKKTAPTLGGLLFIPI 240


>ref|XP_003541661.1| PREDICTED: phospho-N-acetylmuramoyl-pentapeptide-transferase
           homolog [Glycine max]
          Length = 562

 Score =  155 bits (392), Expect = 4e-36
 Identities = 73/152 (48%), Positives = 99/152 (65%)
 Frame = +2

Query: 5   FYIMSSSGEESDADVVLNPIGDVDLPSTNERFESSDGALAVTAHRFGMLRRRGKTNRIQT 184
           + + SS GE+SD ++ L P+ D+DLPS +    S++ AL V AHRF  L R  K +R + 
Sbjct: 144 YMLSSSDGEDSDGEIFLTPVNDLDLPSVSA---SNNDALTVAAHRFANLGRGRKKSRTKL 200

Query: 185 GNIINAGXXXXXXXXXXXXDWCSWRIVRLPLAPFYLSRPFLVSAVLASLAGYLCIPILNN 364
           G  I  G            DWC+WRIVRLPL+PFYL+RPFL+SA+L S  GY+C+PI  +
Sbjct: 201 GIFITMGLIIVLTLLLLYVDWCAWRIVRLPLSPFYLTRPFLISAILVSFVGYVCVPIFRH 260

Query: 365 LRIHQTIRKEGPRIHSLKKGTPTMGGLFFIPI 460
            +I   I+K+GP  H +KK TPT+GGL FIP+
Sbjct: 261 FKIIHVIKKQGPARHHMKKTTPTLGGLLFIPV 292


>ref|XP_002532536.1| phospho-n-acetylmuramoyl-pentapeptide-transferase, putative
           [Ricinus communis] gi|223527748|gb|EEF29852.1|
           phospho-n-acetylmuramoyl-pentapeptide-transferase,
           putative [Ricinus communis]
          Length = 503

 Score =  151 bits (381), Expect = 8e-35
 Identities = 74/153 (48%), Positives = 101/153 (66%), Gaps = 1/153 (0%)
 Frame = +2

Query: 5   FYIMSSSGEESDADVVLNPIGDVDLPSTNERFESSDGALAVTAHRFGMLRRRGKTNRIQT 184
           + I SS GE+SD D VLNP+ D+DLPS +    S++ +L VTAHR  ++ +  + + ++ 
Sbjct: 83  YLISSSDGEDSDGDYVLNPVADIDLPSASV---SNNDSLTVTAHRLAIIAKERRKHMMRQ 139

Query: 185 GNIINAGXXXXXXXXXXXXDWCSWRIVRLPLAPFYLSRPFLVSAVLASLAGYLCIPILNN 364
           G   N G            DWC+W+IVRLPLAPF+LSRPF ++  L+S+AGY+ +P LN 
Sbjct: 140 GIFNNLGLIGFLMFLLFFVDWCAWKIVRLPLAPFHLSRPFFIAIALSSIAGYISVPFLNA 199

Query: 365 LRIHQTIRKE-GPRIHSLKKGTPTMGGLFFIPI 460
           L++HQT  K   P  HS K+ TPTMGGLFFIPI
Sbjct: 200 LKVHQTTSKRVRPVRHSKKRATPTMGGLFFIPI 232


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