BLASTX nr result

ID: Coptis23_contig00008634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008634
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279626.1| PREDICTED: trafficking protein particle comp...   211   1e-52
ref|XP_004144858.1| PREDICTED: trafficking protein particle comp...   206   3e-51
ref|XP_002313700.1| predicted protein [Populus trichocarpa] gi|1...   206   3e-51
ref|XP_003624261.1| Trafficking protein particle complex subunit...   206   5e-51
ref|XP_003534484.1| PREDICTED: uncharacterized protein LOC100527...   205   6e-51

>ref|XP_002279626.1| PREDICTED: trafficking protein particle complex subunit 2-like
           protein [Vitis vinifera] gi|297744593|emb|CBI37855.3|
           unnamed protein product [Vitis vinifera]
          Length = 143

 Score =  211 bits (537), Expect = 1e-52
 Identities = 102/108 (94%), Positives = 106/108 (98%)
 Frame = -1

Query: 687 CSLDVIDERVNNPKKTGPTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD 508
           CSLDV+DERVNNPKK+GPTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD
Sbjct: 35  CSLDVVDERVNNPKKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD 94

Query: 507 VRNFFRRFHSAYVDAVSNPFHVPGKKITSRIFAERVSSIVKSFGFSTA 364
           VRNFFRRFHSAYVDAVSNPFHVPGKKITSR FAERVS+IVKSFG S+A
Sbjct: 95  VRNFFRRFHSAYVDAVSNPFHVPGKKITSRTFAERVSTIVKSFGLSSA 142


>ref|XP_004144858.1| PREDICTED: trafficking protein particle complex subunit 2-like
           protein-like [Cucumis sativus]
           gi|449519966|ref|XP_004167005.1| PREDICTED: trafficking
           protein particle complex subunit 2-like protein-like
           [Cucumis sativus]
          Length = 143

 Score =  206 bits (524), Expect = 3e-51
 Identities = 97/109 (88%), Positives = 107/109 (98%)
 Frame = -1

Query: 687 CSLDVIDERVNNPKKTGPTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD 508
           CSLDV+DERVNNP+K+GPTLNETFLGLLYPTENYKVYGYLTNTKVKFI+VTTDLDVRDAD
Sbjct: 35  CSLDVVDERVNNPRKSGPTLNETFLGLLYPTENYKVYGYLTNTKVKFIMVTTDLDVRDAD 94

Query: 507 VRNFFRRFHSAYVDAVSNPFHVPGKKITSRIFAERVSSIVKSFGFSTAV 361
           VR+FFRRFH+AYVDAVSNPFHVPGKKITS+ FAE VS+IVKSFGFS+A+
Sbjct: 95  VRSFFRRFHAAYVDAVSNPFHVPGKKITSKTFAESVSTIVKSFGFSSAI 143


>ref|XP_002313700.1| predicted protein [Populus trichocarpa] gi|118482540|gb|ABK93191.1|
           unknown [Populus trichocarpa]
           gi|118483113|gb|ABK93465.1| unknown [Populus
           trichocarpa] gi|222850108|gb|EEE87655.1| predicted
           protein [Populus trichocarpa]
          Length = 143

 Score =  206 bits (524), Expect = 3e-51
 Identities = 100/108 (92%), Positives = 105/108 (97%)
 Frame = -1

Query: 687 CSLDVIDERVNNPKKTGPTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD 508
           CSLDV+DERVNNPKK+G TLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD
Sbjct: 35  CSLDVVDERVNNPKKSGLTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD 94

Query: 507 VRNFFRRFHSAYVDAVSNPFHVPGKKITSRIFAERVSSIVKSFGFSTA 364
           VRNFFRRFH+AYVDAVSNPFHVPGKKITSR FAERVS+IVKSFG S+A
Sbjct: 95  VRNFFRRFHAAYVDAVSNPFHVPGKKITSRTFAERVSNIVKSFGLSSA 142


>ref|XP_003624261.1| Trafficking protein particle complex subunit 2-like protein
           [Medicago truncatula] gi|355499276|gb|AES80479.1|
           Trafficking protein particle complex subunit 2-like
           protein [Medicago truncatula]
          Length = 143

 Score =  206 bits (523), Expect = 5e-51
 Identities = 98/108 (90%), Positives = 105/108 (97%)
 Frame = -1

Query: 687 CSLDVIDERVNNPKKTGPTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD 508
           CSLDV+DERVNNPKK+GP LNETFLGLLYP ENYKVYGYLTNTKVKFILVTTD+DV+DAD
Sbjct: 35  CSLDVVDERVNNPKKSGPMLNETFLGLLYPIENYKVYGYLTNTKVKFILVTTDIDVKDAD 94

Query: 507 VRNFFRRFHSAYVDAVSNPFHVPGKKITSRIFAERVSSIVKSFGFSTA 364
           VRNFFRRFH+AYVDAVSNPFHVPGKKITSR FAERVS+IVKSFGFS+A
Sbjct: 95  VRNFFRRFHAAYVDAVSNPFHVPGKKITSRTFAERVSTIVKSFGFSSA 142


>ref|XP_003534484.1| PREDICTED: uncharacterized protein LOC100527601 [Glycine max]
          Length = 143

 Score =  205 bits (522), Expect = 6e-51
 Identities = 99/108 (91%), Positives = 104/108 (96%)
 Frame = -1

Query: 687 CSLDVIDERVNNPKKTGPTLNETFLGLLYPTENYKVYGYLTNTKVKFILVTTDLDVRDAD 508
           CSLDV+DERVNNPKK+GP LNETFLGLLYP ENYKVYGYLTNTKVKFILVTTDLDV+DAD
Sbjct: 35  CSLDVVDERVNNPKKSGPMLNETFLGLLYPIENYKVYGYLTNTKVKFILVTTDLDVKDAD 94

Query: 507 VRNFFRRFHSAYVDAVSNPFHVPGKKITSRIFAERVSSIVKSFGFSTA 364
           VRNFFRRFHSAYVDAVSNPFHVPGKKITSR FAERVS+IVKSFG S+A
Sbjct: 95  VRNFFRRFHSAYVDAVSNPFHVPGKKITSRTFAERVSTIVKSFGLSSA 142


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