BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008631
         (657 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633349.1| PREDICTED: 50S ribosomal protein L29, chloro...   106   2e-47
gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis]          103   2e-44
gb|AEO36436.1| hypothetical protein [Amblyomma maculatum]             104   3e-42
ref|XP_002532831.1| 50S ribosomal protein L29, chloroplast precu...   102   3e-41
ref|XP_002310561.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-41

>ref|XP_003633349.1| PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Vitis
           vinifera]
          Length = 161

 Score =  106 bits (264), Expect(3) = 2e-47
 Identities = 52/59 (88%), Positives = 56/59 (94%)
 Frame = -2

Query: 179 GRMRKRVARMLTVRRERELEEGIKKRLSRKLDRQWKKSIVVRPPPSLRKMQEEEKAAAA 3
           GRMRKRVARMLTV+RERE+EEGI KRLSRKLDRQWKKSIVVRPPPSL+K+QEEE AA A
Sbjct: 100 GRMRKRVARMLTVKREREIEEGINKRLSRKLDRQWKKSIVVRPPPSLKKLQEEEAAAEA 158



 Score = 97.4 bits (241), Expect(3) = 2e-47
 Identities = 48/54 (88%), Positives = 51/54 (94%)
 Frame = -1

Query: 411 MAKREEELKEIRAKTTEEINEEVIDLKGELLMLRLQKSAREEFKNSEFGRMRKR 250
           MAKREEELKEIRAKTTEE+NEE++DLKGELLMLRLQKS R EFK SEFGRMRKR
Sbjct: 52  MAKREEELKEIRAKTTEELNEEIVDLKGELLMLRLQKSVRNEFKPSEFGRMRKR 105



 Score = 32.7 bits (73), Expect(3) = 2e-47
 Identities = 28/60 (46%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
 Frame = -2

Query: 635 MLSLTVPTATTFASSSKPLSIITPKSSSFSGIRIRIPN---FRTQXXXXXSVVMMAKREE 465
           M SL++ + ++     K  S   PKSS F+GIRI  PN   FR+      SVVMMAKREE
Sbjct: 1   MFSLSIASPSSLKIPPKTTSTF-PKSS-FNGIRIPTPNKPSFRS-PSSSSSVVMMAKREE 57


>gb|AEC10965.1| 50S ribosomal protein L29 [Camellia sinensis]
          Length = 178

 Score =  103 bits (257), Expect(3) = 2e-44
 Identities = 50/58 (86%), Positives = 55/58 (94%)
 Frame = -2

Query: 176 RMRKRVARMLTVRRERELEEGIKKRLSRKLDRQWKKSIVVRPPPSLRKMQEEEKAAAA 3
           RMRKR+ARMLTV+RERE+EEGI KRLSRKLDRQWKKSIVVRPPPSL+K+QEEE AA A
Sbjct: 111 RMRKRIARMLTVKREREIEEGINKRLSRKLDRQWKKSIVVRPPPSLKKLQEEEAAAEA 168



 Score = 94.7 bits (234), Expect(3) = 2e-44
 Identities = 47/54 (87%), Positives = 50/54 (92%)
 Frame = -1

Query: 411 MAKREEELKEIRAKTTEEINEEVIDLKGELLMLRLQKSAREEFKNSEFGRMRKR 250
           MAKREEELKEIR KTTEEINEE++DLKGEL MLRLQKSAR EFK+SEF RMRKR
Sbjct: 62  MAKREEELKEIRTKTTEEINEEIVDLKGELFMLRLQKSARNEFKSSEFRRMRKR 115



 Score = 27.7 bits (60), Expect(3) = 2e-44
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 15/72 (20%)
 Frame = -2

Query: 635 MLSLTVPTATTFASSSKPLSIITPKSSSFSGIRI---------------RIPNFRTQXXX 501
           MLSL++ + ++     KP+   + KS+ F GIRI               R P+F      
Sbjct: 1   MLSLSIASPSSVTLPPKPILSASSKST-FHGIRISHLCPARTALCARYVRNPSF----FF 55

Query: 500 XXSVVMMAKREE 465
              VVMMAKREE
Sbjct: 56  FSLVVMMAKREE 67


>gb|AEO36436.1| hypothetical protein [Amblyomma maculatum]
          Length = 155

 Score =  104 bits (259), Expect(2) = 3e-42
 Identities = 52/58 (89%), Positives = 55/58 (94%)
 Frame = -2

Query: 176 RMRKRVARMLTVRRERELEEGIKKRLSRKLDRQWKKSIVVRPPPSLRKMQEEEKAAAA 3
           RMRKRVARMLTVRRERELEEGI KRLSRKLD++WK+SIVVRPPPSLRK QEEEKAA A
Sbjct: 92  RMRKRVARMLTVRRERELEEGINKRLSRKLDKKWKRSIVVRPPPSLRKKQEEEKAAEA 149



 Score = 94.0 bits (232), Expect(2) = 3e-42
 Identities = 46/54 (85%), Positives = 51/54 (94%)
 Frame = -1

Query: 411 MAKREEELKEIRAKTTEEINEEVIDLKGELLMLRLQKSAREEFKNSEFGRMRKR 250
           MAKREEELK+IRAKTTEEINEE++DLKGEL MLRLQ+SAR EFK+SEF RMRKR
Sbjct: 43  MAKREEELKDIRAKTTEEINEEIVDLKGELFMLRLQRSARNEFKSSEFRRMRKR 96


>ref|XP_002532831.1| 50S ribosomal protein L29, chloroplast precursor, putative [Ricinus
           communis] gi|223527398|gb|EEF29538.1| 50S ribosomal
           protein L29, chloroplast precursor, putative [Ricinus
           communis]
          Length = 164

 Score =  102 bits (253), Expect(3) = 3e-41
 Identities = 49/58 (84%), Positives = 54/58 (93%)
 Frame = -2

Query: 176 RMRKRVARMLTVRRERELEEGIKKRLSRKLDRQWKKSIVVRPPPSLRKMQEEEKAAAA 3
           RMRKR+ARMLTV+RERE+EEGI KRLSRK DRQWKKSIVVRPPPSL+K+QEEE AA A
Sbjct: 103 RMRKRIARMLTVKREREIEEGINKRLSRKFDRQWKKSIVVRPPPSLKKLQEEEAAAEA 160



 Score = 87.4 bits (215), Expect(3) = 3e-41
 Identities = 43/54 (79%), Positives = 49/54 (90%)
 Frame = -1

Query: 411 MAKREEELKEIRAKTTEEINEEVIDLKGELLMLRLQKSAREEFKNSEFGRMRKR 250
           M+KR+EELKEIR  +TE+INEEV+DLKGEL MLRLQKSAR EFK+SEF RMRKR
Sbjct: 54  MSKRQEELKEIREMSTEQINEEVVDLKGELFMLRLQKSARNEFKSSEFRRMRKR 107



 Score = 25.8 bits (55), Expect(3) = 3e-41
 Identities = 21/35 (60%), Positives = 26/35 (74%)
 Frame = -2

Query: 635 MLSLTVPTATTFASSSKPLSIITPKSSSFSGIRIR 531
           MLSL++   T+F  S KPLS + PKSS FSGI+IR
Sbjct: 1   MLSLSI---TSF--SPKPLSPV-PKSS-FSGIQIR 28


>ref|XP_002310561.1| predicted protein [Populus trichocarpa] gi|222853464|gb|EEE91011.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score = 98.6 bits (244), Expect(2) = 5e-41
 Identities = 47/58 (81%), Positives = 54/58 (93%)
 Frame = -2

Query: 176 RMRKRVARMLTVRRERELEEGIKKRLSRKLDRQWKKSIVVRPPPSLRKMQEEEKAAAA 3
           RMRKR+ARMLTV+RERE+ EG+ KRLSRKLDRQWK+SIVVRPPPSL+K+QEEE AA A
Sbjct: 58  RMRKRIARMLTVKREREIVEGVGKRLSRKLDRQWKRSIVVRPPPSLKKLQEEEAAAEA 115



 Score = 95.5 bits (236), Expect(2) = 5e-41
 Identities = 48/54 (88%), Positives = 51/54 (94%)
 Frame = -1

Query: 411 MAKREEELKEIRAKTTEEINEEVIDLKGELLMLRLQKSAREEFKNSEFGRMRKR 250
           MAK+EEELKEIRAKTTEEINEEV+DLKGELLMLRLQKS R EFK+SEF RMRKR
Sbjct: 9   MAKKEEELKEIRAKTTEEINEEVVDLKGELLMLRLQKSTRNEFKSSEFRRMRKR 62