BLASTX nr result

ID: Coptis23_contig00008625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008625
         (1258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145088.1| PREDICTED: uncharacterized protein LOC101208...   131   4e-42
ref|XP_003529282.1| PREDICTED: uncharacterized protein LOC100804...   170   8e-40
gb|ADD09588.1| translation initiation factor-related [Trifolium ...   157   5e-36
ref|XP_003530997.1| PREDICTED: uncharacterized protein LOC100804...   152   1e-34
ref|XP_002275372.2| PREDICTED: uncharacterized protein LOC100258...   151   4e-34

>ref|XP_004145088.1| PREDICTED: uncharacterized protein LOC101208164 [Cucumis sativus]
           gi|449473345|ref|XP_004153855.1| PREDICTED:
           uncharacterized protein LOC101220721 [Cucumis sativus]
          Length = 615

 Score =  131 bits (330), Expect(2) = 4e-42
 Identities = 84/201 (41%), Positives = 117/201 (58%), Gaps = 5/201 (2%)
 Frame = -2

Query: 588 NSFSGVEN--ERGDFNGMRGRYEEKSQVVEDESLGGG-NVYYQERVMPQMYTEAKEPNLS 418
           NSF  V+    R   +    R+ E+   V+D + G   ++   +R++   Y   KE +  
Sbjct: 252 NSFDRVDGLYSREHRDASLARHAEREISVDDGTEGHRQDLSEHDRLVVPKYHPVKERSSK 311

Query: 417 FNREVICPASTEGKLGG--SQMQPVIPAEVVERPKIKLLPRSKPLETSEPPIVDYKQGYR 244
            +  V+  +      GG  S + P + + V ERPK+KLLPR+KPL  SEP  VD+ Q   
Sbjct: 312 VDAAVVQHSDPNQMSGGRGSDLHPPVSSLVSERPKLKLLPRTKPLAGSEPNTVDHTQIIP 371

Query: 243 PPSNLGHVETVIELHASETSMKPGSAGSDGGKRAVERPRLNLKPRSQPLEQSEGIAERER 64
              +  +V    E++ +   +KP SAGS+ GK  +ERP+LNLKPRSQ +EQSEG A R+R
Sbjct: 372 DAVSPDNVN---EMYGNSNYVKPSSAGSESGKDGIERPKLNLKPRSQLIEQSEGNAGRDR 428

Query: 63  KGLFGGARPRELVLKERGVDD 1
             LFGGARPRE VLKERGVD+
Sbjct: 429 IALFGGARPREQVLKERGVDN 449



 Score = 67.8 bits (164), Expect(2) = 4e-42
 Identities = 36/58 (62%), Positives = 39/58 (67%)
 Frame = -1

Query: 877 NAWGTRKEVASVNEPVPSSNWTGPNAVSRFAQASALEKVSSGRWQSKHLVVNQPDVEV 704
           NAW  RKEVAS       S W GP+AVS+ A ASALEKVSSGRWQSK  +  Q DV V
Sbjct: 178 NAWQARKEVASGLSENSHSTWDGPSAVSKLAHASALEKVSSGRWQSKQSLHYQTDVVV 235



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 31/55 (56%), Positives = 43/55 (78%), Gaps = 1/55 (1%)
 Frame = -2

Query: 1242 NYDEKSNFFTHSSHMGRNFDEDERKPLDGVSIPRRTVSDDTFRGGPVR-SEPKPD 1081
            ++D+K+ F   ++H+GRNFDEDERKPL GV+ PRRT+SD++ R  P R SE KP+
Sbjct: 70   HFDDKTPFLASAAHIGRNFDEDERKPLGGVTPPRRTISDESIRVLPSRNSELKPE 124


>ref|XP_003529282.1| PREDICTED: uncharacterized protein LOC100804052 [Glycine max]
          Length = 628

 Score =  170 bits (430), Expect = 8e-40
 Identities = 87/189 (46%), Positives = 127/189 (67%), Gaps = 1/189 (0%)
 Frame = -2

Query: 564 ERGDFNGMRGRYEEKSQVVEDESLGGGN-VYYQERVMPQMYTEAKEPNLSFNREVICPAS 388
           E+  ++ M  R+ E+   ++++  GG N +   ER     Y++ +  +   +   +  A 
Sbjct: 266 EKEYYDAMLARHTERGLGIDNQMQGGRNELLNYERSRVSRYSDVRPTSAPHHSGGVQLAR 325

Query: 387 TEGKLGGSQMQPVIPAEVVERPKIKLLPRSKPLETSEPPIVDYKQGYRPPSNLGHVETVI 208
            +GK+ GS +Q  +P+E  ER K+KLLPR+KP+E+SEP ++DY QG R  ++ GHVETV 
Sbjct: 326 NDGKIVGSDLQHRMPSEPTERHKLKLLPRAKPVESSEPAVMDYAQGNRHVNDSGHVETVY 385

Query: 207 ELHASETSMKPGSAGSDGGKRAVERPRLNLKPRSQPLEQSEGIAERERKGLFGGARPREL 28
           + H     +KP SAG+D GK + +RP+LNLKPRSQP+EQ +G +ER+R  LFGGARPREL
Sbjct: 386 QAHGHANFVKPVSAGTDSGKDSGQRPKLNLKPRSQPIEQLDGNSERDRNVLFGGARPREL 445

Query: 27  VLKERGVDD 1
           VLKERG+DD
Sbjct: 446 VLKERGIDD 454



 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 32/54 (59%), Positives = 45/54 (83%), Gaps = 1/54 (1%)
 Frame = -2

Query: 1242 NYDEKSNFFTHSSHMGRNFDEDERKPLDGVSIPRRTVSDDTFRGG-PVRSEPKP 1084
            +YD+K+ F ++++ +GRNFDEDERKPLDG S+PRRT+SD++ RGG P R E +P
Sbjct: 70   HYDDKTPFLSNTAPIGRNFDEDERKPLDGGSVPRRTISDESIRGGPPPRVEVRP 123



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 35/60 (58%), Positives = 40/60 (66%)
 Frame = -1

Query: 877 NAWGTRKEVASVNEPVPSSNWTGPNAVSRFAQASALEKVSSGRWQSKHLVVNQPDVEVIR 698
           N W  RKEVAS  EP   + W+  +A S+ A ASALEKVSSGRWQSK  V  Q D EV+R
Sbjct: 185 NVWSMRKEVASAVEPEQPA-WSSASAASKLAHASALEKVSSGRWQSK-AVHYQTDAEVVR 242


>gb|ADD09588.1| translation initiation factor-related [Trifolium repens]
          Length = 617

 Score =  157 bits (397), Expect = 5e-36
 Identities = 88/195 (45%), Positives = 121/195 (62%), Gaps = 4/195 (2%)
 Frame = -2

Query: 573 VENERGDFNGMRGRYEEKSQVVEDESLGGGNVYYQ-ERVMPQMYTEAKEPNLSFNREVIC 397
           +  E+G+ + M  R+ E+  V+  +  GG N   + ER     Y++ +  +     + + 
Sbjct: 252 IVGEKGNSDEMLARHAERGLVIGSQMQGGRNELSEHERSGVSKYSDVRPRSAVQFSDGVQ 311

Query: 396 PASTEGKLGGSQMQPVIPAEVVERPKIKLLPRSKPLETSEPPIVDYKQGYRPPSNLGHVE 217
           PA T+ K+ GS+    I +E VERPK+KLLPR+KPLE+SEP + +Y QGYR  ++  HVE
Sbjct: 312 PARTDSKVVGSESPHHIASEPVERPKLKLLPRTKPLESSEPSVTEYTQGYRQVNDSSHVE 371

Query: 216 TVIELHASETSMKPGSAGSDGGKRAVERPRLN---LKPRSQPLEQSEGIAERERKGLFGG 46
            V + H      KP SAG++  K   +RP+LN   LKPR +  EQSEG  ER+R  LFGG
Sbjct: 372 PVYQGHGHANYAKPVSAGTESAKELGQRPKLNLKPLKPRPEVHEQSEGNKERDRNALFGG 431

Query: 45  ARPRELVLKERGVDD 1
           ARPRELVLKERGVDD
Sbjct: 432 ARPRELVLKERGVDD 446



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 33/60 (55%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
 Frame = -2

Query: 1242 NYDEKSNFFTHSSHMGRNFDEDERKPLDGVSIPRRTVSDDTFRGG-PVRSEPKPDSPVGR 1066
            +YD+KS F  H++ +GRNFDEDERKPLDG S PRRT+SD++     P R E K  S + R
Sbjct: 70   HYDDKSLFLPHTAPIGRNFDEDERKPLDGSSAPRRTISDESIHAPLPSRVEVKRSSSLSR 129



 Score = 63.5 bits (153), Expect = 1e-07
 Identities = 35/60 (58%), Positives = 40/60 (66%)
 Frame = -1

Query: 877 NAWGTRKEVASVNEPVPSSNWTGPNAVSRFAQASALEKVSSGRWQSKHLVVNQPDVEVIR 698
           N W  RKEVA   E   S+ W+  NAVS+ A ASAL+KVSSGRWQS H    Q DVEV+R
Sbjct: 178 NVWSMRKEVAGAVESEQSA-WSSANAVSKLAHASALDKVSSGRWQSVHY---QTDVEVVR 233


>ref|XP_003530997.1| PREDICTED: uncharacterized protein LOC100804599 [Glycine max]
          Length = 288

 Score =  152 bits (385), Expect = 1e-34
 Identities = 72/116 (62%), Positives = 93/116 (80%)
 Frame = -2

Query: 348 IPAEVVERPKIKLLPRSKPLETSEPPIVDYKQGYRPPSNLGHVETVIELHASETSMKPGS 169
           +P+E+ ERPK+KLLPR+KP+E+SEP ++DY QG R  ++ GHVETV + H     +KP S
Sbjct: 1   MPSELTERPKLKLLPRAKPVESSEPAVMDYAQGNRQVNDSGHVETVYQAHGHANFVKPVS 60

Query: 168 AGSDGGKRAVERPRLNLKPRSQPLEQSEGIAERERKGLFGGARPRELVLKERGVDD 1
           AG+D GK A +RP+LNLKPRSQP E+ +G +ER+R  LFGGARPRELVLKERG+DD
Sbjct: 61  AGNDNGKDAGQRPKLNLKPRSQPTEKLDGNSERDRNVLFGGARPRELVLKERGIDD 116


>ref|XP_002275372.2| PREDICTED: uncharacterized protein LOC100258551 [Vitis vinifera]
          Length = 375

 Score =  151 bits (381), Expect = 4e-34
 Identities = 91/193 (47%), Positives = 114/193 (59%), Gaps = 1/193 (0%)
 Frame = -2

Query: 576 GVENERGDFNGMRGRYEEKSQVVEDESLGGGNVYYQ-ERVMPQMYTEAKEPNLSFNREVI 400
           G+ NERG ++     + E+S + ED       +    ER  P++ TE          E++
Sbjct: 27  GLVNERGSYDDAWETHAERSWIAEDRIGSTAKISPSYERGRPKVDTE----------EIL 76

Query: 399 CPASTEGKLGGSQMQPVIPAEVVERPKIKLLPRSKPLETSEPPIVDYKQGYRPPSNLGHV 220
               TE   G SQ+Q  +  EV   PK+KLLPRSKP+ET E    D+KQGY+ P   G V
Sbjct: 77  ----TEANFGESQIQAAVATEVSGPPKLKLLPRSKPMETLEK---DHKQGYQQPMESGKV 129

Query: 219 ETVIELHASETSMKPGSAGSDGGKRAVERPRLNLKPRSQPLEQSEGIAERERKGLFGGAR 40
            TV  +H +    KPG +GS  G R VERP+LNL PRS PLE SE   ERERK +FGGAR
Sbjct: 130 VTVNRVHGNTDPPKPGFSGSVDGNRPVERPKLNLMPRSLPLENSEESLERERKTVFGGAR 189

Query: 39  PRELVLKERGVDD 1
           PRELVLKERG+DD
Sbjct: 190 PRELVLKERGIDD 202


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