BLASTX nr result

ID: Coptis23_contig00008613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008613
         (664 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314147.1| predicted protein [Populus trichocarpa] gi|2...   167   2e-39
ref|XP_002271624.2| PREDICTED: cucumisin-like [Vitis vinifera]        158   1e-36
emb|CBI24378.3| unnamed protein product [Vitis vinifera]              158   1e-36
emb|CAN62173.1| hypothetical protein VITISV_027754 [Vitis vinifera]   158   1e-36
ref|XP_002864617.1| subtilase family protein [Arabidopsis lyrata...   156   4e-36

>ref|XP_002314147.1| predicted protein [Populus trichocarpa] gi|222850555|gb|EEE88102.1|
            predicted protein [Populus trichocarpa]
          Length = 710

 Score =  167 bits (423), Expect = 2e-39
 Identities = 87/162 (53%), Positives = 113/162 (69%), Gaps = 5/162 (3%)
 Frame = -1

Query: 664  EFAYGSGHIDPVKAVNPGLVHDALESDYLNMLCGTGYTPEQIKTISGHDNNCLENLNSKT 485
            EFA+GSGH++PV A++PGLV++  +SDY+ + CG GYT E+I+ ISG +++C +   + T
Sbjct: 536  EFAFGSGHVNPVTAIHPGLVYETQKSDYIQLFCGLGYTAEKIRQISGDNSSCSKAARN-T 594

Query: 484  LPKDLNYPSM-----ITSAGRANFARTVTNVGVANSTYKAIITSPSNFRISVTPETLSFS 320
            LP+DLNYPSM     +  +    F RTVTNVG ANSTYKA I S S+ +I V PE LSF 
Sbjct: 595  LPRDLNYPSMAAKVAVEESFTIKFHRTVTNVGNANSTYKAKIFSRSSLKIKVVPEALSFK 654

Query: 319  FLHEKQSFVVETDARASEKNYVISGSLVWSDGIHTVRSPIVV 194
             L EK+SF V    R    N ++S SLVWSDG H+VRSPIVV
Sbjct: 655  SLKEKKSFAVTIVGRDLTYNSILSASLVWSDGSHSVRSPIVV 696


>ref|XP_002271624.2| PREDICTED: cucumisin-like [Vitis vinifera]
          Length = 744

 Score =  158 bits (399), Expect = 1e-36
 Identities = 78/162 (48%), Positives = 109/162 (67%), Gaps = 5/162 (3%)
 Frame = -1

Query: 664  EFAYGSGHIDPVKAVNPGLVHDALESDYLNMLCGTGYTPEQIKTISGHDNNCLENLNSKT 485
            EF YGSGHI+PVKA+NPGLV++A + DY+ M+CG G+  E+++ ISG +        ++ 
Sbjct: 577  EFGYGSGHINPVKAINPGLVYEAFKDDYIKMMCGLGFDAEKVRLISGDNTTTCTTGVTQG 636

Query: 484  LPKDLNYPSMITSAGR-----ANFARTVTNVGVANSTYKAIITSPSNFRISVTPETLSFS 320
              +DLNYPSM ++A +       F RTVTNVG ANSTY+A IT+    ++ V P  LSF+
Sbjct: 637  AVRDLNYPSMASTADQHKPFNIRFPRTVTNVGQANSTYQAKITADPLMKVQVNPNVLSFT 696

Query: 319  FLHEKQSFVVETDARASEKNYVISGSLVWSDGIHTVRSPIVV 194
             L+EK++FVV     A +K   +S SLVW+DG H+VRSPI +
Sbjct: 697  SLNEKKTFVVTVSGEALDKQPNVSASLVWTDGTHSVRSPIFI 738


>emb|CBI24378.3| unnamed protein product [Vitis vinifera]
          Length = 741

 Score =  158 bits (399), Expect = 1e-36
 Identities = 78/162 (48%), Positives = 109/162 (67%), Gaps = 5/162 (3%)
 Frame = -1

Query: 664  EFAYGSGHIDPVKAVNPGLVHDALESDYLNMLCGTGYTPEQIKTISGHDNNCLENLNSKT 485
            EF YGSGHI+PVKA+NPGLV++A + DY+ M+CG G+  E+++ ISG +        ++ 
Sbjct: 574  EFGYGSGHINPVKAINPGLVYEAFKDDYIKMMCGLGFDAEKVRLISGDNTTTCTTGVTQG 633

Query: 484  LPKDLNYPSMITSAGR-----ANFARTVTNVGVANSTYKAIITSPSNFRISVTPETLSFS 320
              +DLNYPSM ++A +       F RTVTNVG ANSTY+A IT+    ++ V P  LSF+
Sbjct: 634  AVRDLNYPSMASTADQHKPFNIRFPRTVTNVGQANSTYQAKITADPLMKVQVNPNVLSFT 693

Query: 319  FLHEKQSFVVETDARASEKNYVISGSLVWSDGIHTVRSPIVV 194
             L+EK++FVV     A +K   +S SLVW+DG H+VRSPI +
Sbjct: 694  SLNEKKTFVVTVSGEALDKQPNVSASLVWTDGTHSVRSPIFI 735


>emb|CAN62173.1| hypothetical protein VITISV_027754 [Vitis vinifera]
          Length = 683

 Score =  158 bits (399), Expect = 1e-36
 Identities = 78/162 (48%), Positives = 109/162 (67%), Gaps = 5/162 (3%)
 Frame = -1

Query: 664  EFAYGSGHIDPVKAVNPGLVHDALESDYLNMLCGTGYTPEQIKTISGHDNNCLENLNSKT 485
            EF YGSGHI+PVKA+NPGLV++A + DY+ M+CG G+  E+++ ISG +        ++ 
Sbjct: 516  EFGYGSGHINPVKAINPGLVYEAFKDDYIKMMCGLGFDAEKVRLISGDNTTTCTTGVTQG 575

Query: 484  LPKDLNYPSMITSAGR-----ANFARTVTNVGVANSTYKAIITSPSNFRISVTPETLSFS 320
              +DLNYPSM ++A +       F RTVTNVG ANSTY+A IT+    ++ V P  LSF+
Sbjct: 576  AVRDLNYPSMASTADQHKPFNIRFPRTVTNVGQANSTYQAKITADPLMKVQVNPNVLSFT 635

Query: 319  FLHEKQSFVVETDARASEKNYVISGSLVWSDGIHTVRSPIVV 194
             L+EK++FVV     A +K   +S SLVW+DG H+VRSPI +
Sbjct: 636  SLNEKKTFVVTVSGEALDKQPNVSASLVWTDGTHSVRSPIFI 677


>ref|XP_002864617.1| subtilase family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297310452|gb|EFH40876.1| subtilase family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 742

 Score =  156 bits (394), Expect = 4e-36
 Identities = 81/164 (49%), Positives = 108/164 (65%), Gaps = 7/164 (4%)
 Frame = -1

Query: 664  EFAYGSGHIDPVKAVNPGLVHDALESDYLNMLCGTGYTPEQIKTISGHDNNCLENLNSKT 485
            EFAYGSGH+DP+ A+NPGLV++  ++D++  LCG  Y  + ++ ISG ++ C + L SKT
Sbjct: 576  EFAYGSGHVDPIAAINPGLVYELTKADHITFLCGLNYKSDHLRIISGDNSTCTKKL-SKT 634

Query: 484  LPKDLNYPSMI-----TSAGRANFARTVTNVGVANSTYKA-IITSP-SNFRISVTPETLS 326
            LP++LNYP+M      T      F RTVTNVG+ NSTYKA ++TSP S  RI V P  LS
Sbjct: 635  LPRNLNYPTMSAKVSGTEQFNITFQRTVTNVGMKNSTYKAKVVTSPDSKLRIKVLPRVLS 694

Query: 325  FSFLHEKQSFVVETDARASEKNYVISGSLVWSDGIHTVRSPIVV 194
               ++EKQSFVV     +      +S +L+W DG H VRSPIVV
Sbjct: 695  MKSINEKQSFVVTVSGDSIGTKQPLSANLIWFDGTHNVRSPIVV 738


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