BLASTX nr result

ID: Coptis23_contig00008607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008607
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK96563.1| unknown [Populus trichocarpa x Populus deltoides]       93   1e-16
ref|XP_002515345.1| conserved hypothetical protein [Ricinus comm...    93   1e-16
ref|XP_002324385.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16
ref|XP_002280476.2| PREDICTED: uncharacterized protein LOC100259...    90   9e-16
emb|CBI20757.3| unnamed protein product [Vitis vinifera]               90   9e-16

>gb|ABK96563.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 249

 Score = 93.2 bits (230), Expect = 1e-16
 Identities = 47/88 (53%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
 Frame = -1

Query: 640 ALGTMGSLEESLPIKRGLSNFYAGKSKSFANLLE---VTTIAELAKPENPYNKRRRSLVA 470
           ALG++ S+E++LPIKRGLSN + GKSKSF NL E   V T+ EL KPENP+NKRRR L+A
Sbjct: 97  ALGSLNSMEDALPIKRGLSNHFTGKSKSFTNLAEVNTVNTVKELEKPENPFNKRRRILMA 156

Query: 469 SKWHATGRTYYSSLDLPSTPAMNDHDQQ 386
           +KW  + R++YS  +  S P +  H+++
Sbjct: 157 NKW--SRRSFYSWSNPKSMPLLTMHEEE 182


>ref|XP_002515345.1| conserved hypothetical protein [Ricinus communis]
           gi|223545289|gb|EEF46794.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 257

 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 47/99 (47%), Positives = 71/99 (71%), Gaps = 9/99 (9%)
 Frame = -1

Query: 646 KGALGTMGSLEESLPIKRGLSNFYAGKSKSFANLLEVT----TIAELAKPENPYNKRRRS 479
           KGA+ ++ +LE+SLPIKRGLSN +AGKSKSF NL +V+    T+ +L KPENP+NKRRR+
Sbjct: 90  KGAIVSLDALEDSLPIKRGLSNHFAGKSKSFTNLSDVSSSVNTVKDLVKPENPFNKRRRT 149

Query: 478 LVASKWHATGRTYYSSLDLPSTPAM-----NDHDQQAQR 377
           L+A+KW+    ++YS  +  S P +      + +++AQ+
Sbjct: 150 LMANKWYRRKSSFYSWSNPKSMPLLALAEEEEEEEEAQQ 188


>ref|XP_002324385.1| predicted protein [Populus trichocarpa] gi|222865819|gb|EEF02950.1|
           predicted protein [Populus trichocarpa]
          Length = 250

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 47/88 (53%), Positives = 65/88 (73%), Gaps = 3/88 (3%)
 Frame = -1

Query: 640 ALGTMGSLEESLPIKRGLSNFYAGKSKSFANLLE---VTTIAELAKPENPYNKRRRSLVA 470
           ALG++ S+E++LPIKRGLSN + GKSKSF NL E   V T+ EL KPENP+NKRRR L+A
Sbjct: 97  ALGSLNSMEDALPIKRGLSNHFTGKSKSFTNLGEVNTVNTVKELEKPENPFNKRRRILMA 156

Query: 469 SKWHATGRTYYSSLDLPSTPAMNDHDQQ 386
           +KW  + R++YS  +  S P +  H+++
Sbjct: 157 NKW--SRRSFYSWSNPKSMPLLTMHEEE 182


>ref|XP_002280476.2| PREDICTED: uncharacterized protein LOC100259275 [Vitis vinifera]
          Length = 220

 Score = 90.1 bits (222), Expect = 9e-16
 Identities = 45/87 (51%), Positives = 61/87 (70%)
 Frame = -1

Query: 631 TMGSLEESLPIKRGLSNFYAGKSKSFANLLEVTTIAELAKPENPYNKRRRSLVASKWHAT 452
           ++GSLE+SLPIKRGLSN ++G+SKSFANL +V T+A+L K ENP+NKRRR+L+A K    
Sbjct: 102 SLGSLEDSLPIKRGLSNCFSGRSKSFANLSDVNTVADLQKEENPFNKRRRTLIAYKLSRK 161

Query: 451 GRTYYSSLDLPSTPAMNDHDQQAQRNN 371
              +YS  +  S P +   +   Q NN
Sbjct: 162 NSGFYSWQNPNSMPLLTLKEDPNQENN 188


>emb|CBI20757.3| unnamed protein product [Vitis vinifera]
          Length = 860

 Score = 90.1 bits (222), Expect = 9e-16
 Identities = 45/87 (51%), Positives = 61/87 (70%)
 Frame = -1

Query: 631  TMGSLEESLPIKRGLSNFYAGKSKSFANLLEVTTIAELAKPENPYNKRRRSLVASKWHAT 452
            ++GSLE+SLPIKRGLSN ++G+SKSFANL +V T+A+L K ENP+NKRRR+L+A K    
Sbjct: 742  SLGSLEDSLPIKRGLSNCFSGRSKSFANLSDVNTVADLQKEENPFNKRRRTLIAYKLSRK 801

Query: 451  GRTYYSSLDLPSTPAMNDHDQQAQRNN 371
               +YS  +  S P +   +   Q NN
Sbjct: 802  NSGFYSWQNPNSMPLLTLKEDPNQENN 828


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