BLASTX nr result

ID: Coptis23_contig00008599 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008599
         (2768 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306582.1| predicted protein [Populus trichocarpa] gi|2...   724   0.0  
ref|XP_002285801.1| PREDICTED: endoplasmic reticulum-Golgi inter...   722   0.0  
ref|XP_002513896.1| Endoplasmic reticulum-Golgi intermediate com...   718   0.0  
ref|XP_003544786.1| PREDICTED: endoplasmic reticulum-Golgi inter...   711   0.0  
ref|XP_003615024.1| Endoplasmic reticulum-Golgi intermediate com...   706   0.0  

>ref|XP_002306582.1| predicted protein [Populus trichocarpa] gi|222856031|gb|EEE93578.1|
            predicted protein [Populus trichocarpa]
          Length = 386

 Score =  724 bits (1869), Expect = 0.0
 Identities = 343/386 (88%), Positives = 365/386 (94%)
 Frame = +1

Query: 1561 MDNMFSKLRNLDAYPKINEDFYSRTLSGGVITIVSSIVMLLLFISELRLYLHAVTETQLV 1740
            M+ + SKLRNLDAYPKINEDFYSRTLSGGVIT+ SS+VM LLF SELRLYLHAVTET+LV
Sbjct: 1    MEGLMSKLRNLDAYPKINEDFYSRTLSGGVITLASSVVMFLLFFSELRLYLHAVTETKLV 60

Query: 1741 VDTSRGETLRINFDVTFPALQCSILSIDAMDISGEQHLDVRHDIIKKRIDVHGNVIETRQ 1920
            VDTSRGETLRINFDVTFPAL CSILS+DAMDISGEQHLDV+HDIIKKR+D HGNVIE RQ
Sbjct: 61   VDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDFHGNVIEARQ 120

Query: 1921 DGIGGPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEEVREAYRKKGWGMSNP 2100
            DGIG PKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCE+VREAYRKKGW ++NP
Sbjct: 121  DGIGAPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWAVTNP 180

Query: 2101 DLIDQCKREGFLQKIKDEVGEGCNVYGSLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 2280
            DL+DQCKREGFLQKIKDE GEGCN+YG LEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ
Sbjct: 181  DLMDQCKREGFLQKIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 240

Query: 2281 TDSFNISHKINRLTFGEYFPGVVNPLDGVKWVQETPHGMYQYFIKVVPTVYTDIRGHTIQ 2460
             DSFNI+HKINRLTFGEYFPGVVNPLDGV+W QETP GMYQYFIKVVPTVYTD+ GHTIQ
Sbjct: 241  KDSFNITHKINRLTFGEYFPGVVNPLDGVQWTQETPSGMYQYFIKVVPTVYTDVSGHTIQ 300

Query: 2461 TNQFSVTEHFRNAEFGRPQALPGVFFFYDLSPIKVTFAEEHISFLHFLTNVCAIVGGVFT 2640
            +NQFSVTEHFR  + GR Q+LPGVFFFYDLSPIKVTF EEH+SFLHFLTNVCAIVGGVFT
Sbjct: 301  SNQFSVTEHFRGTDIGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFT 360

Query: 2641 VSGIVDSFIYHGQKAIKKKMEIGKFS 2718
            VSGI+D+FIYHGQKAIKKKMEIGKFS
Sbjct: 361  VSGILDTFIYHGQKAIKKKMEIGKFS 386


>ref|XP_002285801.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3 [Vitis vinifera] gi|302141938|emb|CBI19141.3|
            unnamed protein product [Vitis vinifera]
          Length = 386

 Score =  722 bits (1864), Expect = 0.0
 Identities = 344/386 (89%), Positives = 364/386 (94%)
 Frame = +1

Query: 1561 MDNMFSKLRNLDAYPKINEDFYSRTLSGGVITIVSSIVMLLLFISELRLYLHAVTETQLV 1740
            MDN+ +KLRNLDAYPKINEDFYSRTLSGGVIT+ SSI MLLLFISELRLYLHAVTET+LV
Sbjct: 1    MDNIINKLRNLDAYPKINEDFYSRTLSGGVITLASSIFMLLLFISELRLYLHAVTETKLV 60

Query: 1741 VDTSRGETLRINFDVTFPALQCSILSIDAMDISGEQHLDVRHDIIKKRIDVHGNVIETRQ 1920
            VDTSRGETLRINFDVTFPAL CSILS+DAMDISGEQHLDVRHDIIKKRID HG+VIE RQ
Sbjct: 61   VDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVRHDIIKKRIDAHGSVIEARQ 120

Query: 1921 DGIGGPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEEVREAYRKKGWGMSNP 2100
            DGIG PKIEKPLQ+HGGRLEHNETYCGSCYGAEASD+DCCN+CEEVREAYRKKGW MSNP
Sbjct: 121  DGIGSPKIEKPLQKHGGRLEHNETYCGSCYGAEASDDDCCNNCEEVREAYRKKGWAMSNP 180

Query: 2101 DLIDQCKREGFLQKIKDEVGEGCNVYGSLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 2280
            DLIDQCKREGFLQ+IKDE GEGCN+YG LEVNKVAGNFHFAPGKSFQQS +HVHDLLAFQ
Sbjct: 181  DLIDQCKREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNIHVHDLLAFQ 240

Query: 2281 TDSFNISHKINRLTFGEYFPGVVNPLDGVKWVQETPHGMYQYFIKVVPTVYTDIRGHTIQ 2460
             DSFNISHKINRL FG+YFPGVVNPLDGV+W+Q TP GMYQYFIKVVPTVYT + GHTI 
Sbjct: 241  KDSFNISHKINRLAFGDYFPGVVNPLDGVQWIQATPSGMYQYFIKVVPTVYTHVSGHTIS 300

Query: 2461 TNQFSVTEHFRNAEFGRPQALPGVFFFYDLSPIKVTFAEEHISFLHFLTNVCAIVGGVFT 2640
            TNQFSVTEHFRNAE GR Q+LPGVFFFYDLSPIKVTF EEH+SFLHFLTNVCAIVGGVFT
Sbjct: 301  TNQFSVTEHFRNAELGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFT 360

Query: 2641 VSGIVDSFIYHGQKAIKKKMEIGKFS 2718
            VSGI+DSFIYH QKAIKKK+EIGKFS
Sbjct: 361  VSGILDSFIYHSQKAIKKKIEIGKFS 386


>ref|XP_002513896.1| Endoplasmic reticulum-Golgi intermediate compartment protein,
            putative [Ricinus communis] gi|223546982|gb|EEF48479.1|
            Endoplasmic reticulum-Golgi intermediate compartment
            protein, putative [Ricinus communis]
          Length = 386

 Score =  718 bits (1853), Expect = 0.0
 Identities = 342/386 (88%), Positives = 364/386 (94%)
 Frame = +1

Query: 1561 MDNMFSKLRNLDAYPKINEDFYSRTLSGGVITIVSSIVMLLLFISELRLYLHAVTETQLV 1740
            M+ + +KLRNLDAYPKINEDFYSRTLSGGVIT+ SSI+MLLLFISELRLY+HAVTET+L 
Sbjct: 1    MEGIMNKLRNLDAYPKINEDFYSRTLSGGVITLASSILMLLLFISELRLYIHAVTETKLA 60

Query: 1741 VDTSRGETLRINFDVTFPALQCSILSIDAMDISGEQHLDVRHDIIKKRIDVHGNVIETRQ 1920
            VDTSRGETLRINFDVTFPAL CSILS+DAMDISGEQHLDV+HDIIKKR+D HGNVIE RQ
Sbjct: 61   VDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDSHGNVIEARQ 120

Query: 1921 DGIGGPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEEVREAYRKKGWGMSNP 2100
            DGIG PKIE PLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCE+VREAYRKKGW +SNP
Sbjct: 121  DGIGAPKIENPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEDVREAYRKKGWALSNP 180

Query: 2101 DLIDQCKREGFLQKIKDEVGEGCNVYGSLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 2280
            DLIDQCKREGFLQ+IKDE GEGCN+YG LEVNKVAGNFHFAPGKSFQQS VHVHDLLAFQ
Sbjct: 181  DLIDQCKREGFLQRIKDEEGEGCNIYGFLEVNKVAGNFHFAPGKSFQQSNVHVHDLLAFQ 240

Query: 2281 TDSFNISHKINRLTFGEYFPGVVNPLDGVKWVQETPHGMYQYFIKVVPTVYTDIRGHTIQ 2460
             DSFNISHKINRL FG+YFPGVVNPLDGV W QETP GMYQYFIKVVPTVYTD+ G+TIQ
Sbjct: 241  KDSFNISHKINRLAFGDYFPGVVNPLDGVHWTQETPSGMYQYFIKVVPTVYTDVSGYTIQ 300

Query: 2461 TNQFSVTEHFRNAEFGRPQALPGVFFFYDLSPIKVTFAEEHISFLHFLTNVCAIVGGVFT 2640
            +NQFSVTEHFR+AE GR Q+LPGVFFFYDLSPIKVTF EEH+SFLHFLTNVCAIVGGVFT
Sbjct: 301  SNQFSVTEHFRSAEAGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGVFT 360

Query: 2641 VSGIVDSFIYHGQKAIKKKMEIGKFS 2718
            VSGI+DSFIYHGQKAIKKKMEIGKFS
Sbjct: 361  VSGILDSFIYHGQKAIKKKMEIGKFS 386


>ref|XP_003544786.1| PREDICTED: endoplasmic reticulum-Golgi intermediate compartment
            protein 3-like [Glycine max]
          Length = 386

 Score =  711 bits (1834), Expect = 0.0
 Identities = 337/386 (87%), Positives = 362/386 (93%)
 Frame = +1

Query: 1561 MDNMFSKLRNLDAYPKINEDFYSRTLSGGVITIVSSIVMLLLFISELRLYLHAVTETQLV 1740
            MD++ SKLRNLDAYPKINEDFYSRTLSGGVIT+ SSI+MLLLF SELRLYLHAVTET+LV
Sbjct: 1    MDSIMSKLRNLDAYPKINEDFYSRTLSGGVITLASSILMLLLFFSELRLYLHAVTETKLV 60

Query: 1741 VDTSRGETLRINFDVTFPALQCSILSIDAMDISGEQHLDVRHDIIKKRIDVHGNVIETRQ 1920
            VDTSR ETLRINFDVTFPAL CSILS+DAMDISGEQHLDV+HDIIKKR+D HGNVIETRQ
Sbjct: 61   VDTSRAETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDIIKKRLDSHGNVIETRQ 120

Query: 1921 DGIGGPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEEVREAYRKKGWGMSNP 2100
            +GIG PKIEKPLQRHGGRLEHNETYCGSCYGAE SD+DCCNSCE+VREAYRKKGW +SNP
Sbjct: 121  EGIGAPKIEKPLQRHGGRLEHNETYCGSCYGAEESDDDCCNSCEDVREAYRKKGWALSNP 180

Query: 2101 DLIDQCKREGFLQKIKDEVGEGCNVYGSLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 2280
            DLIDQCKREGFLQ+IKDE GEGCNVYG LEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ
Sbjct: 181  DLIDQCKREGFLQRIKDEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 240

Query: 2281 TDSFNISHKINRLTFGEYFPGVVNPLDGVKWVQETPHGMYQYFIKVVPTVYTDIRGHTIQ 2460
             DSFN+SH INRL FGEYFPGVVNPLD V W QETP GMYQYFIKVVPTVYTD+ GHTIQ
Sbjct: 241  KDSFNLSHHINRLAFGEYFPGVVNPLDNVHWTQETPSGMYQYFIKVVPTVYTDVSGHTIQ 300

Query: 2461 TNQFSVTEHFRNAEFGRPQALPGVFFFYDLSPIKVTFAEEHISFLHFLTNVCAIVGGVFT 2640
            +NQFSVTEHFR  + GR Q+LPGVFFFYDLSPIKVTF EE++SFLHFLTNVCAIVGG+FT
Sbjct: 301  SNQFSVTEHFRTGDVGRLQSLPGVFFFYDLSPIKVTFTEENVSFLHFLTNVCAIVGGIFT 360

Query: 2641 VSGIVDSFIYHGQKAIKKKMEIGKFS 2718
            VSGI+DSFIYHGQ+AIKKKME+GKF+
Sbjct: 361  VSGILDSFIYHGQRAIKKKMELGKFN 386


>ref|XP_003615024.1| Endoplasmic reticulum-Golgi intermediate compartment protein
            [Medicago truncatula] gi|355516359|gb|AES97982.1|
            Endoplasmic reticulum-Golgi intermediate compartment
            protein [Medicago truncatula]
          Length = 386

 Score =  706 bits (1822), Expect = 0.0
 Identities = 335/386 (86%), Positives = 363/386 (94%)
 Frame = +1

Query: 1561 MDNMFSKLRNLDAYPKINEDFYSRTLSGGVITIVSSIVMLLLFISELRLYLHAVTETQLV 1740
            MD++ +KLRNLDAYPKINEDFYSRTLSGG+ITIVSSI+MLLLF SELRLYLHA TET+LV
Sbjct: 1    MDSIMNKLRNLDAYPKINEDFYSRTLSGGLITIVSSILMLLLFFSELRLYLHAATETKLV 60

Query: 1741 VDTSRGETLRINFDVTFPALQCSILSIDAMDISGEQHLDVRHDIIKKRIDVHGNVIETRQ 1920
            VDTSRGETLRINFDVTFPAL CSI+S+DAMDISGEQHLDVRHDIIKKRID HGNVIETRQ
Sbjct: 61   VDTSRGETLRINFDVTFPALACSIVSLDAMDISGEQHLDVRHDIIKKRIDSHGNVIETRQ 120

Query: 1921 DGIGGPKIEKPLQRHGGRLEHNETYCGSCYGAEASDEDCCNSCEEVREAYRKKGWGMSNP 2100
            DGIG P IEKPLQRHGGRLEHNETYCGSCYGAEASDE+CCNSCEEVREAYRKKGW +S+P
Sbjct: 121  DGIGSPNIEKPLQRHGGRLEHNETYCGSCYGAEASDEECCNSCEEVREAYRKKGWALSSP 180

Query: 2101 DLIDQCKREGFLQKIKDEVGEGCNVYGSLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 2280
            D IDQCKREGFL++IK+E GEGCNVYG LEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ
Sbjct: 181  DSIDQCKREGFLERIKEEEGEGCNVYGFLEVNKVAGNFHFAPGKSFQQSGVHVHDLLAFQ 240

Query: 2281 TDSFNISHKINRLTFGEYFPGVVNPLDGVKWVQETPHGMYQYFIKVVPTVYTDIRGHTIQ 2460
             +SFN+SH INR+ FG+YFPGVVNPLD V W QETP GMYQYFIKVVPT+YTD+ G+TIQ
Sbjct: 241  KESFNLSHHINRIAFGDYFPGVVNPLDRVHWTQETPSGMYQYFIKVVPTMYTDVSGNTIQ 300

Query: 2461 TNQFSVTEHFRNAEFGRPQALPGVFFFYDLSPIKVTFAEEHISFLHFLTNVCAIVGGVFT 2640
            +NQFSVTEHFR A+ GR Q+LPGVFFFYDLSPIKVTF EEH+SFLHFLTNVCAIVGG+FT
Sbjct: 301  SNQFSVTEHFRTADVGRLQSLPGVFFFYDLSPIKVTFTEEHVSFLHFLTNVCAIVGGIFT 360

Query: 2641 VSGIVDSFIYHGQKAIKKKMEIGKFS 2718
            VSGI+DSFIYHGQKAIKKKME+GKFS
Sbjct: 361  VSGILDSFIYHGQKAIKKKMELGKFS 386


Top