BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008597
         (1776 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|2...   151   6e-34
gb|AFK40774.1| unknown [Lotus japonicus]                              148   5e-33
ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing fac...   147   1e-32
ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing fac...   146   2e-32
ref|XP_002534324.1| arginine/serine-rich splicing factor, putati...   146   2e-32

>ref|XP_002325387.1| predicted protein [Populus trichocarpa] gi|222862262|gb|EEE99768.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  151 bits (381), Expect = 6e-34
 Identities = 73/106 (68%), Positives = 75/106 (70%)
 Frame = +2

Query: 62  MSRVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXXG 241
           MSRVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAFVEF              G
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAIDAIRALDG 60

Query: 242 KNGWRVELSHNSKSXXXXXXXXXXXXXXEDLKCYECGEPGHFAREC 379
           KNGWRVELSHNSK               ED KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGRSGDGHGRGGGEDSKCYECGEPGHFAREC 106


>gb|AFK40774.1| unknown [Lotus japonicus]
          Length = 181

 Score =  148 bits (373), Expect = 5e-33
 Identities = 73/106 (68%), Positives = 76/106 (71%)
 Frame = +2

Query: 62  MSRVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXXG 241
           MSRVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAF+EF              G
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRLYGVLRSVWVARRPPGYAFLEFDDKRDALDAIHALDG 60

Query: 242 KNGWRVELSHNSKSXXXXXXXXXXXXXXEDLKCYECGEPGHFAREC 379
           KNGWRVELSHNSK               EDLKCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKG-GGGGRGGGRGRGGEDLKCYECGEPGHFAREC 105


>ref|XP_003532014.1| PREDICTED: serine/arginine-rich splicing factor 7-like [Glycine
           max]
          Length = 176

 Score =  147 bits (370), Expect = 1e-32
 Identities = 72/106 (67%), Positives = 75/106 (70%)
 Frame = +2

Query: 62  MSRVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXXG 241
           MSRVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAF+EF              G
Sbjct: 1   MSRVYVGNLDPRVSERDLEDEFRIYGVLRSVWVARRPPGYAFIEFDDRRDALDAIQALDG 60

Query: 242 KNGWRVELSHNSKSXXXXXXXXXXXXXXEDLKCYECGEPGHFAREC 379
           KNGWRVELSHNSK               ED KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKG----GGRGGRGRGGEDTKCYECGEPGHFAREC 102


>ref|XP_002264105.1| PREDICTED: serine/arginine-rich splicing factor 7 [Vitis vinifera]
           gi|296086540|emb|CBI32129.3| unnamed protein product
           [Vitis vinifera]
          Length = 182

 Score =  146 bits (369), Expect = 2e-32
 Identities = 73/110 (66%), Positives = 76/110 (69%), Gaps = 4/110 (3%)
 Frame = +2

Query: 62  MSRVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXXG 241
           MSRVYVGNLDPRVSERELEDEFR YGV+RSVWVAR+PPGYAFVEF              G
Sbjct: 1   MSRVYVGNLDPRVSERELEDEFRVYGVIRSVWVARRPPGYAFVEFADRRDAVDAIRGLDG 60

Query: 242 KNGWRVELSHNSK----SXXXXXXXXXXXXXXEDLKCYECGEPGHFAREC 379
           K+GWRVELSHNSK                   EDLKCYECGEPGHFAREC
Sbjct: 61  KSGWRVELSHNSKGGGGGGGGGGGRDRGRGGGEDLKCYECGEPGHFAREC 110


>ref|XP_002534324.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223525498|gb|EEF28060.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 184

 Score =  146 bits (368), Expect = 2e-32
 Identities = 72/109 (66%), Positives = 76/109 (69%), Gaps = 3/109 (2%)
 Frame = +2

Query: 62  MSRVYVGNLDPRVSERELEDEFRAYGVLRSVWVARKPPGYAFVEFXXXXXXXXXXXXXXG 241
           M+RVYVGNLDPRVSER+LEDEFR YGVLRSVWVAR+PPGYAFVEF              G
Sbjct: 1   MARVYVGNLDPRVSERDLEDEFRMYGVLRSVWVARRPPGYAFVEFDDRRDAVDAIRALDG 60

Query: 242 KNGWRVELSHNSK---SXXXXXXXXXXXXXXEDLKCYECGEPGHFAREC 379
           KNGWRVELSHNSK                  ED+KCYECGEPGHFAREC
Sbjct: 61  KNGWRVELSHNSKGGGGRGGGSGGGGRGRGGEDMKCYECGEPGHFAREC 109