BLASTX nr result
ID: Coptis23_contig00008593
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00008593 (682 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002320889.1| predicted protein [Populus trichocarpa] gi|2... 60 5e-07 emb|CBI38687.3| unnamed protein product [Vitis vinifera] 57 3e-06 dbj|BAJ33957.1| unnamed protein product [Thellungiella halophila] 56 8e-06 >ref|XP_002320889.1| predicted protein [Populus trichocarpa] gi|222861662|gb|EEE99204.1| predicted protein [Populus trichocarpa] Length = 238 Score = 59.7 bits (143), Expect = 5e-07 Identities = 39/109 (35%), Positives = 54/109 (49%), Gaps = 2/109 (1%) Frame = -2 Query: 675 PRIERRSCPLASDGKSTERDPDNR-VIKSEHEQKPAISFEGSDLRAAPCSD-DXXXXXXX 502 P E C + S+E + +N K E E KP +S E + SD D Sbjct: 130 PVEEGECCGQGAAVNSSEGESENGDATKGESETKPRLSIEQPEHGLGVLSDEDSSIKVDY 189 Query: 501 XXXXXEADLMNVMDPASSILASPGNWSAFNSDNGLFDQSSSTSQWWEFW 355 E +LM++++PA L S +W + +SD GLFDQSSS QWW+FW Sbjct: 190 FELEEEPNLMSMVEPAEGSLTSQEDWGSIDSD-GLFDQSSSGYQWWDFW 237 >emb|CBI38687.3| unnamed protein product [Vitis vinifera] Length = 193 Score = 57.0 bits (136), Expect = 3e-06 Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 2/94 (2%) Frame = -2 Query: 630 STERDPDNRVIKS-EHEQKPAISFEGSDLRAAPCSDDXXXXXXXXXXXXEA-DLMNVMDP 457 S E + DNR + E E KP +S E S+ SDD E L+ +++P Sbjct: 100 SAESEADNRDNGNCESEVKPNLSLERSEHGGGVLSDDDSSIRADYFVMEEEPSLLTMVEP 159 Query: 456 ASSILASPGNWSAFNSDNGLFDQSSSTSQWWEFW 355 L SP +W +++S+N +FDQSS + QWW+FW Sbjct: 160 VDGCLTSPEDWGSWDSEN-VFDQSSGSYQWWDFW 192 >dbj|BAJ33957.1| unnamed protein product [Thellungiella halophila] Length = 248 Score = 55.8 bits (133), Expect = 8e-06 Identities = 22/41 (53%), Positives = 27/41 (65%) Frame = -2 Query: 477 LMNVMDPASSILASPGNWSAFNSDNGLFDQSSSTSQWWEFW 355 LMN+++PA S L S +W F SD L DQSSS WW+FW Sbjct: 207 LMNIVEPADSCLTSSDDWRGFRSDTNLLDQSSSNYPWWDFW 247