BLASTX nr result

ID: Coptis23_contig00008590 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008590
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322738.1| predicted protein [Populus trichocarpa] gi|2...   169   4e-40
ref|XP_002309293.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
ref|XP_003632681.1| PREDICTED: uncharacterized protein LOC100257...   165   5e-39
emb|CBI29995.3| unnamed protein product [Vitis vinifera]              165   5e-39
gb|AFW89082.1| hypothetical protein ZEAMMB73_419311, partial [Ze...   164   2e-38

>ref|XP_002322738.1| predicted protein [Populus trichocarpa] gi|222867368|gb|EEF04499.1|
           predicted protein [Populus trichocarpa]
          Length = 1180

 Score =  169 bits (428), Expect = 4e-40
 Identities = 92/165 (55%), Positives = 107/165 (64%), Gaps = 13/165 (7%)
 Frame = -2

Query: 456 MPGLPQRNVQFXXXXXXXXXXXXXXXXXXXXXXXSKHRDDISFDQLQKFWNELPPHARQE 277
           MPGL QRN QF                        KHRDD+SF+QLQKFW+ELPP ARQ+
Sbjct: 1   MPGLAQRNEQFRNATSSGGSYSISANGFWS-----KHRDDVSFNQLQKFWSELPPQARQK 55

Query: 276 LLKIDKQTLLEQARKNLYCSRCNGLLLEGFSQIVMYGKSQQLE--GGHVANGRMPSVSSE 103
           LL+IDKQTL EQARKN+YCSRCNGLLLEGF QIVMY KS Q E  GGH+   R+ +  + 
Sbjct: 56  LLRIDKQTLFEQARKNMYCSRCNGLLLEGFMQIVMYVKSLQQEGGGGHIPCNRLEASKNL 115

Query: 102 S-----------DDSQDPSVHPWGGLIATREGILTLLDCFLEAKS 1
           +           D+ QDPSVHPWGGL  TR+G LTLL C+L +KS
Sbjct: 116 NDCGSHVPNGCQDEIQDPSVHPWGGLTTTRDGSLTLLTCYLFSKS 160


>ref|XP_002309293.1| predicted protein [Populus trichocarpa] gi|222855269|gb|EEE92816.1|
           predicted protein [Populus trichocarpa]
          Length = 1222

 Score =  166 bits (421), Expect = 2e-39
 Identities = 93/172 (54%), Positives = 104/172 (60%), Gaps = 20/172 (11%)
 Frame = -2

Query: 456 MPGLPQRNVQFXXXXXXXXXXXXXXXXXXXXXXXSKHRDDISFDQLQKFWNELPPHARQE 277
           MPGL QRN QF                        KHRDD+SF+QLQKFW+ELPP ARQ+
Sbjct: 1   MPGLTQRNDQFSNATSSGGSYSISANSFWS-----KHRDDVSFNQLQKFWSELPPQARQK 55

Query: 276 LLKIDKQTLLEQARKNLYCSRCNGLLLEGFSQIVMYGKSQQLEGG--------------- 142
           LL+IDKQ L EQARKN+YCSRCNGLLLEGF QIVMYGKS Q EGG               
Sbjct: 56  LLRIDKQALFEQARKNMYCSRCNGLLLEGFMQIVMYGKSLQQEGGAGHLRCDILEASKNL 115

Query: 141 -----HVANGRMPSVSSESDDSQDPSVHPWGGLIATREGILTLLDCFLEAKS 1
                HV NG         D+ QDPSV+PWGGL  TR+G LTLL C+L +KS
Sbjct: 116 NDCGSHVTNGC-------QDEIQDPSVYPWGGLTTTRDGSLTLLKCYLFSKS 160


>ref|XP_003632681.1| PREDICTED: uncharacterized protein LOC100257222 [Vitis vinifera]
          Length = 1284

 Score =  165 bits (418), Expect = 5e-39
 Identities = 85/130 (65%), Positives = 98/130 (75%), Gaps = 13/130 (10%)
 Frame = -2

Query: 351 KHRDDISFDQLQKFWNELPPHARQELLKIDKQTLLEQARKNLYCSRCNGLLLEGFSQIVM 172
           KHRDDISF+QLQKFW+EL P ARQELL+IDKQTL EQARKN+YCSRCNGLLLEGF QIVM
Sbjct: 34  KHRDDISFNQLQKFWSELSPQARQELLRIDKQTLFEQARKNMYCSRCNGLLLEGFLQIVM 93

Query: 171 YGKSQQLE--GGHVANGRMPSVSSES-----------DDSQDPSVHPWGGLIATREGILT 31
           YGKS Q E  GG + N R  ++  ++           D++QDPSVHPWGGL  TR+G LT
Sbjct: 94  YGKSLQQEGAGGQLPNHRSGALKIQNDGVLSTTNGCQDEAQDPSVHPWGGLTTTRDGALT 153

Query: 30  LLDCFLEAKS 1
           LLD FL + S
Sbjct: 154 LLDSFLFSHS 163


>emb|CBI29995.3| unnamed protein product [Vitis vinifera]
          Length = 1196

 Score =  165 bits (418), Expect = 5e-39
 Identities = 85/130 (65%), Positives = 98/130 (75%), Gaps = 13/130 (10%)
 Frame = -2

Query: 351 KHRDDISFDQLQKFWNELPPHARQELLKIDKQTLLEQARKNLYCSRCNGLLLEGFSQIVM 172
           KHRDDISF+QLQKFW+EL P ARQELL+IDKQTL EQARKN+YCSRCNGLLLEGF QIVM
Sbjct: 34  KHRDDISFNQLQKFWSELSPQARQELLRIDKQTLFEQARKNMYCSRCNGLLLEGFLQIVM 93

Query: 171 YGKSQQLE--GGHVANGRMPSVSSES-----------DDSQDPSVHPWGGLIATREGILT 31
           YGKS Q E  GG + N R  ++  ++           D++QDPSVHPWGGL  TR+G LT
Sbjct: 94  YGKSLQQEGAGGQLPNHRSGALKIQNDGVLSTTNGCQDEAQDPSVHPWGGLTTTRDGALT 153

Query: 30  LLDCFLEAKS 1
           LLD FL + S
Sbjct: 154 LLDSFLFSHS 163


>gb|AFW89082.1| hypothetical protein ZEAMMB73_419311, partial [Zea mays]
          Length = 515

 Score =  164 bits (414), Expect = 2e-38
 Identities = 77/121 (63%), Positives = 95/121 (78%), Gaps = 4/121 (3%)
 Frame = -2

Query: 351 KHRDDISFDQLQKFWNELPPHARQELLKIDKQTLLEQARKNLYCSRCNGLLLEGFSQIVM 172
           + RD+I+FD+LQKFWN+L P ARQELLK+DKQTL+EQARKN YCSRCNGLLLE F+QIV+
Sbjct: 15  RRRDEITFDRLQKFWNDLLPQARQELLKLDKQTLIEQARKNFYCSRCNGLLLESFAQIVI 74

Query: 171 YGKSQQLEGGHVANGR----MPSVSSESDDSQDPSVHPWGGLIATREGILTLLDCFLEAK 4
           YGKS Q E   + + R    +     E D +QDPS+HPWGGL  T++G LTLLDCF++AK
Sbjct: 75  YGKSLQQEASDIGHLRTAIELRITHGEQDGAQDPSIHPWGGLSTTKDGFLTLLDCFIKAK 134

Query: 3   S 1
           S
Sbjct: 135 S 135


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