BLASTX nr result

ID: Coptis23_contig00008577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008577
         (735 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564471.1| uncharacterized protein [Arabidopsis thaliana] ...   114   2e-23
ref|XP_002302271.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23
ref|XP_002891218.1| hypothetical protein ARALYDRAFT_473719 [Arab...   114   3e-23
ref|XP_002513854.1| conserved hypothetical protein [Ricinus comm...   110   2e-22
ref|XP_002306597.1| predicted protein [Populus trichocarpa] gi|2...   109   5e-22

>ref|NP_564471.1| uncharacterized protein [Arabidopsis thaliana]
           gi|12324478|gb|AAG52198.1|AC021199_4 hypothetical
           protein; 22958-25021 [Arabidopsis thaliana]
           gi|15982773|gb|AAL09734.1| At1g36320/F7F23_4
           [Arabidopsis thaliana] gi|21553742|gb|AAM62835.1|
           unknown [Arabidopsis thaliana]
           gi|21655273|gb|AAM65348.1| At1g36320/F7F23_4
           [Arabidopsis thaliana] gi|332193739|gb|AEE31860.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 414

 Score =  114 bits (285), Expect = 2e-23
 Identities = 55/76 (72%), Positives = 65/76 (85%), Gaps = 1/76 (1%)
 Frame = -1

Query: 735 ERADAEDNPEIKHNLFRLARKLKEIDKDVESHNELLGVIKES-ASDISGLVARRRKDFTK 559
           ERAD+EDNPE+KH + RLARKLKE+D+D++ HNELL VIK +  ++I  LVARRRKDFT 
Sbjct: 137 ERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLNVIKRTPPAEIGELVARRRKDFTN 196

Query: 558 EFFLHLHTVAESYYDN 511
           EFF HLHTVAESYYDN
Sbjct: 197 EFFEHLHTVAESYYDN 212


>ref|XP_002302271.1| predicted protein [Populus trichocarpa] gi|222843997|gb|EEE81544.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  114 bits (285), Expect = 2e-23
 Identities = 53/75 (70%), Positives = 66/75 (88%)
 Frame = -1

Query: 735 ERADAEDNPEIKHNLFRLARKLKEIDKDVESHNELLGVIKESASDISGLVARRRKDFTKE 556
           ERAD ED+P  KHNL R ARKLKEID+DV+ HNELLGVIK + S+++ +VA+RRKDFTKE
Sbjct: 45  ERADCEDDPGKKHNLLRFARKLKEIDEDVQRHNELLGVIKAAPSELTEIVAKRRKDFTKE 104

Query: 555 FFLHLHTVAESYYDN 511
           FF+HL+TVA+SY+DN
Sbjct: 105 FFVHLYTVAQSYHDN 119


>ref|XP_002891218.1| hypothetical protein ARALYDRAFT_473719 [Arabidopsis lyrata subsp.
           lyrata] gi|297337060|gb|EFH67477.1| hypothetical protein
           ARALYDRAFT_473719 [Arabidopsis lyrata subsp. lyrata]
          Length = 414

 Score =  114 bits (284), Expect = 3e-23
 Identities = 55/76 (72%), Positives = 64/76 (84%), Gaps = 1/76 (1%)
 Frame = -1

Query: 735 ERADAEDNPEIKHNLFRLARKLKEIDKDVESHNELLGVIKES-ASDISGLVARRRKDFTK 559
           ERAD+EDNPE+KH + RLARKLKE+D+D++ HNELL VIK +  +DI  LVAR RKDFT 
Sbjct: 137 ERADSEDNPEMKHKVHRLARKLKEVDEDIQRHNELLNVIKRTPPADIGELVARHRKDFTN 196

Query: 558 EFFLHLHTVAESYYDN 511
           EFF HLHTVAESYYDN
Sbjct: 197 EFFEHLHTVAESYYDN 212


>ref|XP_002513854.1| conserved hypothetical protein [Ricinus communis]
           gi|223546940|gb|EEF48437.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 399

 Score =  110 bits (276), Expect = 2e-22
 Identities = 53/75 (70%), Positives = 65/75 (86%)
 Frame = -1

Query: 735 ERADAEDNPEIKHNLFRLARKLKEIDKDVESHNELLGVIKESASDISGLVARRRKDFTKE 556
           ERAD+E++P IKH L R ARKLKEID+DV+ HNELL VIK + S+IS +VARRRKDFTKE
Sbjct: 123 ERADSENDPGIKHKLLRFARKLKEIDEDVQRHNELLEVIKNAPSEISEVVARRRKDFTKE 182

Query: 555 FFLHLHTVAESYYDN 511
           FF+H+ TVA+SY+DN
Sbjct: 183 FFVHVFTVAQSYHDN 197


>ref|XP_002306597.1| predicted protein [Populus trichocarpa] gi|222856046|gb|EEE93593.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  109 bits (273), Expect = 5e-22
 Identities = 50/75 (66%), Positives = 65/75 (86%)
 Frame = -1

Query: 735 ERADAEDNPEIKHNLFRLARKLKEIDKDVESHNELLGVIKESASDISGLVARRRKDFTKE 556
           ERAD+ED+P  KHNL + ARK KEID+D++ HNELLGVIK++ S++S +VA+ RKDFTKE
Sbjct: 45  ERADSEDDPGKKHNLLKFARKFKEIDEDMQRHNELLGVIKKAPSELSEVVAKHRKDFTKE 104

Query: 555 FFLHLHTVAESYYDN 511
           FF HL+TVA+SY+DN
Sbjct: 105 FFAHLYTVAQSYHDN 119


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