BLASTX nr result

ID: Coptis23_contig00008572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008572
         (955 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263977.1| PREDICTED: dehydrodolichyl diphosphate synth...   352   6e-95
emb|CAN61413.1| hypothetical protein VITISV_029565 [Vitis vinifera]   350   2e-94
emb|CBI37101.3| unnamed protein product [Vitis vinifera]              344   2e-92
ref|XP_003533416.1| PREDICTED: dehydrodolichyl diphosphate synth...   341   1e-91
gb|AFW98427.1| cis-prenyltransferase 3 [Solanum lycopersicum]         337   3e-90

>ref|XP_002263977.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like isoform 1
           [Vitis vinifera] gi|359480265|ref|XP_003632424.1|
           PREDICTED: dehydrodolichyl diphosphate synthase 6-like
           isoform 2 [Vitis vinifera]
          Length = 290

 Score =  352 bits (904), Expect = 6e-95
 Identities = 175/277 (63%), Positives = 219/277 (79%), Gaps = 1/277 (0%)
 Frame = -2

Query: 888 ENMCIFLRKCIFRVLSVGPIPNHIAFIMDGNRRYARKGNVNEGTGHRVGFLALMSMLKYC 709
           EN+  FLRKCIF VLSVGPIPNHIAFIMDGNRR+A+K N+ EG GH+VG+LALMSML+Y 
Sbjct: 14  ENLGTFLRKCIFSVLSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYS 73

Query: 708 YELGVKYVTVYAFSIDNFRRKPQEVESVMDLMQDKIEDLLREESIVKSFGIRVHFVGNLQ 529
           YELGVKYVT+YAFSI+NF+R+P+EV+SVMDLMQ+KIE L+ EESI+  FG+RVHF+GNL+
Sbjct: 74  YELGVKYVTIYAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLK 133

Query: 528 LLRESVRLXXXXXXXXXANNDKCVLFVCIAYSSTDEIVHAVQETYNERRSEIQELKSKEV 349
           LL   VRL         A N K VL +C+AY+ST+EI+HAV+E+  ++  EI+ELK+  V
Sbjct: 134 LLSAPVRLAAERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIRELKASGV 193

Query: 348 NKDASRAI-RQMIDNECPIKLSDIEKHFYMAMAPDPDILVRTSGEARLSNFLLWQTTCCY 172
           +   ++    +  + +  I L+DIEKH YMA+APDPDIL+RTSGE RLSNFLLWQ+  CY
Sbjct: 194 DCGLTKLEGYEKGEAQDLINLTDIEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYCY 253

Query: 171 LYSPSALWPEISLRHLVWGILSYQRVQPYLEKKKKQL 61
           LYSPS LWPEI   HL+W +L++QR   YLEKKKKQL
Sbjct: 254 LYSPSVLWPEIGFWHLLWAVLNFQRNHFYLEKKKKQL 290


>emb|CAN61413.1| hypothetical protein VITISV_029565 [Vitis vinifera]
          Length = 384

 Score =  350 bits (899), Expect = 2e-94
 Identities = 174/277 (62%), Positives = 218/277 (78%), Gaps = 1/277 (0%)
 Frame = -2

Query: 888 ENMCIFLRKCIFRVLSVGPIPNHIAFIMDGNRRYARKGNVNEGTGHRVGFLALMSMLKYC 709
           EN+  FLRKCIF VLSVGPIPNHIAFIMDGNRR+A+K N+ EG GH+VG+LALMSML+Y 
Sbjct: 108 ENLGTFLRKCIFSVLSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYS 167

Query: 708 YELGVKYVTVYAFSIDNFRRKPQEVESVMDLMQDKIEDLLREESIVKSFGIRVHFVGNLQ 529
           YELGVKYVT+YAFSI+NF+R+P+EV+SVMDLMQ+KIE L+ EESI+  FG+RVHF+GNL+
Sbjct: 168 YELGVKYVTIYAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLK 227

Query: 528 LLRESVRLXXXXXXXXXANNDKCVLFVCIAYSSTDEIVHAVQETYNERRSEIQELKSKEV 349
           LL   VRL         A N K VL +C+AY+ST+EI+HAV+E+  ++  EI+EL +  V
Sbjct: 228 LLSAPVRLAAERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIRELNASGV 287

Query: 348 NKDASRAI-RQMIDNECPIKLSDIEKHFYMAMAPDPDILVRTSGEARLSNFLLWQTTCCY 172
           +   ++    +  + +  I L+DIEKH YMA+APDPDIL+RTSGE RLSNFLLWQ+  CY
Sbjct: 288 DCGLTKLEGYEKGEAQDLINLTDIEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYCY 347

Query: 171 LYSPSALWPEISLRHLVWGILSYQRVQPYLEKKKKQL 61
           LYSPS LWPEI   HL+W +L++QR   YLEKKKKQL
Sbjct: 348 LYSPSVLWPEIGFWHLLWAVLNFQRNHFYLEKKKKQL 384


>emb|CBI37101.3| unnamed protein product [Vitis vinifera]
          Length = 269

 Score =  344 bits (883), Expect = 2e-92
 Identities = 172/276 (62%), Positives = 210/276 (76%)
 Frame = -2

Query: 888 ENMCIFLRKCIFRVLSVGPIPNHIAFIMDGNRRYARKGNVNEGTGHRVGFLALMSMLKYC 709
           EN+  FLRKCIF VLSVGPIPNHIAFIMDGNRR+A+K N+ EG GH+VG+LALMSML+Y 
Sbjct: 14  ENLGTFLRKCIFSVLSVGPIPNHIAFIMDGNRRFAKKQNLIEGAGHKVGYLALMSMLRYS 73

Query: 708 YELGVKYVTVYAFSIDNFRRKPQEVESVMDLMQDKIEDLLREESIVKSFGIRVHFVGNLQ 529
           YELGVKYVT+YAFSI+NF+R+P+EV+SVMDLMQ+KIE L+ EESI+  FG+RVHF+GNL+
Sbjct: 74  YELGVKYVTIYAFSIENFKRRPEEVQSVMDLMQEKIEQLINEESILNHFGVRVHFIGNLK 133

Query: 528 LLRESVRLXXXXXXXXXANNDKCVLFVCIAYSSTDEIVHAVQETYNERRSEIQELKSKEV 349
           LL   VRL         A N K VL +C+AY+ST+EI+HAV+E+  ++  EI+ELK+  V
Sbjct: 134 LLSAPVRLAAERAMLVTACNSKAVLSICVAYTSTNEIMHAVEESCVKKWDEIRELKASGV 193

Query: 348 NKDASRAIRQMIDNECPIKLSDIEKHFYMAMAPDPDILVRTSGEARLSNFLLWQTTCCYL 169
           +                     IEKH YMA+APDPDIL+RTSGE RLSNFLLWQ+  CYL
Sbjct: 194 DY--------------------IEKHLYMAVAPDPDILIRTSGETRLSNFLLWQSQYCYL 233

Query: 168 YSPSALWPEISLRHLVWGILSYQRVQPYLEKKKKQL 61
           YSPS LWPEI   HL+W +L++QR   YLEKKKKQL
Sbjct: 234 YSPSVLWPEIGFWHLLWAVLNFQRNHFYLEKKKKQL 269


>ref|XP_003533416.1| PREDICTED: dehydrodolichyl diphosphate synthase 6-like [Glycine
           max]
          Length = 308

 Score =  341 bits (875), Expect = 1e-91
 Identities = 170/289 (58%), Positives = 217/289 (75%), Gaps = 19/289 (6%)
 Frame = -2

Query: 873 FLRKCIFRVLSVGPIPNHIAFIMDGNRRYARKGNVNEGTGHRVGFLALMSMLKYCYELGV 694
           +LR+C+F +LSVGP+P+HIAFIMDGNRRYA+K N+ EG GH+ GF ALMS+L+YCYELGV
Sbjct: 19  YLRRCMFAILSVGPVPSHIAFIMDGNRRYAKKRNMEEGDGHKAGFTALMSILRYCYELGV 78

Query: 693 KYVTVYAFSIDNFRRKPQEVESVMDLMQDKIEDLLREESIVKSFGIRVHFVGNLQLLRES 514
           KYVTVYAFSIDNF+RKP EV+S+M+LM++KIE+LL +ES++  +G+R+HF+G+LQLL E 
Sbjct: 79  KYVTVYAFSIDNFKRKPNEVQSLMELMREKIEELLLQESLINEYGVRLHFIGDLQLLTEP 138

Query: 513 VRLXXXXXXXXXANNDKCVLFVCIAYSSTDEIVHAVQETYNERRSEIQELKS-------- 358
           VR          A+N++ VL +C+AY+S  EIVHAVQE   E+ +E+Q  K         
Sbjct: 139 VRASVEKAMRVTAHNNQRVLLICVAYTSRHEIVHAVQECCKEKWNEVQASKEAKLTNEKH 198

Query: 357 KEVNKDASRAI----------RQMIDNECP-IKLSDIEKHFYMAMAPDPDILVRTSGEAR 211
            E N +A   +          R+    + P IKL DIEKH YMA+APDPDIL+RTSGEAR
Sbjct: 199 SENNSEAEITLCNELFEMTEERKYKQGDVPLIKLVDIEKHMYMAVAPDPDILIRTSGEAR 258

Query: 210 LSNFLLWQTTCCYLYSPSALWPEISLRHLVWGILSYQRVQPYLEKKKKQ 64
           LSNFLLWQT+ C LY+P+ALWPEI LRHLVW +L++QR   YLEKKKKQ
Sbjct: 259 LSNFLLWQTSTCPLYAPTALWPEIGLRHLVWAVLNFQRHHFYLEKKKKQ 307


>gb|AFW98427.1| cis-prenyltransferase 3 [Solanum lycopersicum]
          Length = 290

 Score =  337 bits (863), Expect = 3e-90
 Identities = 163/279 (58%), Positives = 216/279 (77%), Gaps = 4/279 (1%)
 Frame = -2

Query: 888 ENMCIFLRKCIFRVLSVGPIPNHIAFIMDGNRRYARKGNVNEGTGHRVGFLALMSMLKYC 709
           EN+  F+R+CIF +LSVGP+P+HIAFIMDGNRRY++K N+ +G GHR GF AL++MLKYC
Sbjct: 14  ENISSFVRQCIFSILSVGPVPSHIAFIMDGNRRYSKKQNLLDGNGHRAGFSALINMLKYC 73

Query: 708 YELGVKYVTVYAFSIDNFRRKPQEVESVMDLMQDKIEDLLREESIVKSFGIRVHFVGNLQ 529
           YELGVKY+TVYAFSIDNF+R+P+EV S+M LMQ+KI++L +EESIV   GIR++F GNL+
Sbjct: 74  YELGVKYITVYAFSIDNFKRRPEEVVSLMKLMQEKIDELTKEESIVNRLGIRIYFQGNLK 133

Query: 528 LLRESVRLXXXXXXXXXANNDKCVLFVCIAYSSTDEIVHAVQETYNERRSEIQELKSKEV 349
           LL + VRL         + N K +L +C+AY+STDEIVHAVQE+  E+  EI++L   +V
Sbjct: 134 LLSDHVRLAAERAMVKTSGNSKAILSICVAYTSTDEIVHAVQESCEEKWDEIRKL---DV 190

Query: 348 NKDASRAIRQMID----NECPIKLSDIEKHFYMAMAPDPDILVRTSGEARLSNFLLWQTT 181
           N D S  IR   +    NE  I ++++++H YM++ PDPDI++RTSG  RLSNFLLWQ++
Sbjct: 191 NNDGSNLIRLEENVKDKNEHRIGVTNVDRHMYMSVCPDPDIIIRTSGATRLSNFLLWQSS 250

Query: 180 CCYLYSPSALWPEISLRHLVWGILSYQRVQPYLEKKKKQ 64
            C LYSP+ALWPEI LRHL+W IL +QR   YL++KKKQ
Sbjct: 251 HCLLYSPAALWPEIGLRHLIWVILDFQRNYLYLKEKKKQ 289


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