BLASTX nr result

ID: Coptis23_contig00008568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008568
         (998 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinife...   448   e-124
ref|XP_002527764.1| eukaryotic translation initiation factor 2c,...   447   e-123
ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argo...   439   e-121
ref|XP_004149653.1| PREDICTED: protein argonaute 4-like [Cucumis...   439   e-121
gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]      436   e-120

>ref|XP_002275928.1| PREDICTED: protein argonaute 4 [Vitis vinifera]
           gi|296083994|emb|CBI24382.3| unnamed protein product
           [Vitis vinifera]
          Length = 913

 Score =  448 bits (1153), Expect = e-124
 Identities = 232/331 (70%), Positives = 261/331 (78%)
 Frame = +1

Query: 4   NVVPIKAEVEYVYESKVPKIKRLPMSRPGFARRGQPIQLLTNHFGVNVKSVDGDFYHYSV 183
           NVVPIKA+     E    K+ R+P++R GFA +GQ I L TNHF VNV   DG F+HYSV
Sbjct: 23  NVVPIKAD-SVASEPVKKKVARVPIARRGFASKGQKIALTTNHFKVNVTGADGHFFHYSV 81

Query: 184 SLSYDDDRPVEGKGIGRKVIXXXXXXXXXXXLFKVATWSLSCIGRKVIDKLHECYADTEL 363
           SLSY+D RPV+GKGIGRKV                            ID++HE Y D+EL
Sbjct: 82  SLSYEDGRPVDGKGIGRKV----------------------------IDRVHETY-DSEL 112

Query: 364 GGKDFAYDGEKTLFTVGPLPQNKHDFTVVLEDISSNRAAANASPKGSGSPDEGDRKRFRR 543
           GGKDFAYDGEK+LFTVGPLP+NK +FTVVLED+SSNR   N SP   GSP+E DRKR RR
Sbjct: 113 GGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDVSSNRNNGNGSPD-RGSPNESDRKRMRR 171

Query: 544 PFQSKTFKVAISFAAKIPMKAIALALRGQESESSQDALRVLDIILRQHAAKQGCLLVRQS 723
           P+QSKTFKV ISFAAKIPM+AIA ALRGQESE+SQ+ALRVLDIILRQHA+KQGCLLVRQS
Sbjct: 172 PYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHASKQGCLLVRQS 231

Query: 724 FFHNNPRNFCDLGGGVLGCRGFHSSFRATHGGLSLNIDVSTTMIIQPGPVVDFLIANQNV 903
           FFHN+P+NF DLGGGVLGCRGFHSSFR T GGLSLNIDVSTTMI+QPGPVVDFLIANQN 
Sbjct: 232 FFHNDPKNFIDLGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIVQPGPVVDFLIANQNA 291

Query: 904 RDPYGIDWAKAKRTLKNLRIKASPSNTEYKI 996
           RDP+ +DWAKAK+ LKNLR+K SPSNTEYKI
Sbjct: 292 RDPFSLDWAKAKKMLKNLRVKTSPSNTEYKI 322


>ref|XP_002527764.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223532851|gb|EEF34625.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 921

 Score =  447 bits (1149), Expect = e-123
 Identities = 230/331 (69%), Positives = 264/331 (79%)
 Frame = +1

Query: 4   NVVPIKAEVEYVYESKVPKIKRLPMSRPGFARRGQPIQLLTNHFGVNVKSVDGDFYHYSV 183
           +VVP++AE E V +    K+ R+P++R G   +GQ I LLTNHF VNV  VD  F+HY V
Sbjct: 37  DVVPMRAEPEPVKK----KVVRVPIARRGLGSKGQKISLLTNHFKVNVNKVDDYFFHYCV 92

Query: 184 SLSYDDDRPVEGKGIGRKVIXXXXXXXXXXXLFKVATWSLSCIGRKVIDKLHECYADTEL 363
           SLSY+D RPV+GKG+GRKV                            ID++HE Y D+E+
Sbjct: 93  SLSYEDGRPVDGKGVGRKV----------------------------IDRVHETY-DSEM 123

Query: 364 GGKDFAYDGEKTLFTVGPLPQNKHDFTVVLEDISSNRAAANASPKGSGSPDEGDRKRFRR 543
           GGK FAYDGEK+LFTVG LP+NK +FTVVLED++SNR   NASP G GSP+EGDRKR RR
Sbjct: 124 GGKKFAYDGEKSLFTVGALPRNKLEFTVVLEDVTSNRNNGNASPDGHGSPNEGDRKRMRR 183

Query: 544 PFQSKTFKVAISFAAKIPMKAIALALRGQESESSQDALRVLDIILRQHAAKQGCLLVRQS 723
           P+QSKTFKV ISFAAKIPM+AIA ALRGQESE+SQ+A+RVLDIILRQHAAKQGCLLVRQ+
Sbjct: 184 PYQSKTFKVEISFAAKIPMQAIANALRGQESENSQEAIRVLDIILRQHAAKQGCLLVRQN 243

Query: 724 FFHNNPRNFCDLGGGVLGCRGFHSSFRATHGGLSLNIDVSTTMIIQPGPVVDFLIANQNV 903
           FFHN+P+NF D+GGGVLGCRGFHSSFR T GGLSLNIDVSTTMIIQPGPVVDFLIANQNV
Sbjct: 244 FFHNDPKNFADVGGGVLGCRGFHSSFRTTQGGLSLNIDVSTTMIIQPGPVVDFLIANQNV 303

Query: 904 RDPYGIDWAKAKRTLKNLRIKASPSNTEYKI 996
           RDP+ +DWAKAKRTLKNLRIKASPSN EYKI
Sbjct: 304 RDPFQLDWAKAKRTLKNLRIKASPSNQEYKI 334


>ref|XP_004165479.1| PREDICTED: LOW QUALITY PROTEIN: protein argonaute 4-like [Cucumis
           sativus]
          Length = 915

 Score =  439 bits (1130), Expect = e-121
 Identities = 223/331 (67%), Positives = 262/331 (79%)
 Frame = +1

Query: 4   NVVPIKAEVEYVYESKVPKIKRLPMSRPGFARRGQPIQLLTNHFGVNVKSVDGDFYHYSV 183
           NVVPI+AE+E   E    K+ R+P++R G A +GQ I LLTNHF VNV +++G F+HYSV
Sbjct: 27  NVVPIQAELEQAPEIVKKKVVRVPIARRGLASKGQKISLLTNHFKVNVTNIEGHFFHYSV 86

Query: 184 SLSYDDDRPVEGKGIGRKVIXXXXXXXXXXXLFKVATWSLSCIGRKVIDKLHECYADTEL 363
           +L+Y+D RPV+GKG+GRKV                            IDK+HE Y ++EL
Sbjct: 87  ALAYEDGRPVDGKGVGRKV----------------------------IDKVHETY-NSEL 117

Query: 364 GGKDFAYDGEKTLFTVGPLPQNKHDFTVVLEDISSNRAAANASPKGSGSPDEGDRKRFRR 543
            GKDFAYDGEK+LFTVGPLP+NK +FTVVLEDI+SNR   N SP G GSP+ GDRKR +R
Sbjct: 118 AGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDITSNRNNGNCSPDGHGSPNNGDRKRMKR 177

Query: 544 PFQSKTFKVAISFAAKIPMKAIALALRGQESESSQDALRVLDIILRQHAAKQGCLLVRQS 723
           P++SK+FKV ISFAAKIPM+AIA ALRGQESE+ Q+A+RVLDIILRQ+A+KQGCLLVRQS
Sbjct: 178 PYRSKSFKVEISFAAKIPMQAIASALRGQESENFQEAIRVLDIILRQNASKQGCLLVRQS 237

Query: 724 FFHNNPRNFCDLGGGVLGCRGFHSSFRATHGGLSLNIDVSTTMIIQPGPVVDFLIANQNV 903
           FFHN+P +  D+GGGVLGCRGFHSSFR T  GLSLNIDVSTTMIIQPGPVVDFLIANQNV
Sbjct: 238 FFHNDPNSCTDVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNV 297

Query: 904 RDPYGIDWAKAKRTLKNLRIKASPSNTEYKI 996
           RDP+ +DW KAKRTLKNLRIKASPSN EYKI
Sbjct: 298 RDPFSLDWTKAKRTLKNLRIKASPSNAEYKI 328


>ref|XP_004149653.1| PREDICTED: protein argonaute 4-like [Cucumis sativus]
          Length = 915

 Score =  439 bits (1130), Expect = e-121
 Identities = 223/331 (67%), Positives = 262/331 (79%)
 Frame = +1

Query: 4   NVVPIKAEVEYVYESKVPKIKRLPMSRPGFARRGQPIQLLTNHFGVNVKSVDGDFYHYSV 183
           NVVPI+AE+E   E    K+ R+P++R G A +GQ I LLTNHF VNV +++G F+HYSV
Sbjct: 27  NVVPIQAELEQAPEIVKKKVVRVPIARRGLASKGQKISLLTNHFKVNVTNIEGHFFHYSV 86

Query: 184 SLSYDDDRPVEGKGIGRKVIXXXXXXXXXXXLFKVATWSLSCIGRKVIDKLHECYADTEL 363
           +L+Y+D RPV+GKG+GRKV                            IDK+HE Y ++EL
Sbjct: 87  ALAYEDGRPVDGKGVGRKV----------------------------IDKVHETY-NSEL 117

Query: 364 GGKDFAYDGEKTLFTVGPLPQNKHDFTVVLEDISSNRAAANASPKGSGSPDEGDRKRFRR 543
            GKDFAYDGEK+LFTVGPLP+NK +FTVVLEDI+SNR   N SP G GSP+ GDRKR +R
Sbjct: 118 AGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDITSNRNNGNCSPDGHGSPNNGDRKRMKR 177

Query: 544 PFQSKTFKVAISFAAKIPMKAIALALRGQESESSQDALRVLDIILRQHAAKQGCLLVRQS 723
           P++SK+FKV ISFAAKIPM+AIA ALRGQESE+ Q+A+RVLDIILRQ+A+KQGCLLVRQS
Sbjct: 178 PYRSKSFKVEISFAAKIPMQAIASALRGQESENFQEAIRVLDIILRQNASKQGCLLVRQS 237

Query: 724 FFHNNPRNFCDLGGGVLGCRGFHSSFRATHGGLSLNIDVSTTMIIQPGPVVDFLIANQNV 903
           FFHN+P +  D+GGGVLGCRGFHSSFR T  GLSLNIDVSTTMIIQPGPVVDFLIANQNV
Sbjct: 238 FFHNDPNSCTDVGGGVLGCRGFHSSFRTTQSGLSLNIDVSTTMIIQPGPVVDFLIANQNV 297

Query: 904 RDPYGIDWAKAKRTLKNLRIKASPSNTEYKI 996
           RDP+ +DW KAKRTLKNLRIKASPSN EYKI
Sbjct: 298 RDPFSLDWTKAKRTLKNLRIKASPSNAEYKI 328


>gb|ACZ04920.1| argonaute 4-like protein [Pelargonium x hortorum]
          Length = 933

 Score =  436 bits (1120), Expect = e-120
 Identities = 223/331 (67%), Positives = 256/331 (77%)
 Frame = +1

Query: 4   NVVPIKAEVEYVYESKVPKIKRLPMSRPGFARRGQPIQLLTNHFGVNVKSVDGDFYHYSV 183
           +VVP++A+ E   E    K+ R+P++R G A +GQ I LLTNHF VNV +V+G F+HYSV
Sbjct: 44  DVVPVRADTELPLEPVKKKVLRVPIARRGLASKGQKIPLLTNHFKVNVTNVEGHFFHYSV 103

Query: 184 SLSYDDDRPVEGKGIGRKVIXXXXXXXXXXXLFKVATWSLSCIGRKVIDKLHECYADTEL 363
           +L Y+D RPV+GKG+G KVI                            D++ E Y DTEL
Sbjct: 104 ALFYEDGRPVDGKGVGGKVI----------------------------DRVQETY-DTEL 134

Query: 364 GGKDFAYDGEKTLFTVGPLPQNKHDFTVVLEDISSNRAAANASPKGSGSPDEGDRKRFRR 543
            GKDFAYDGEK+LFTVGPLP+NKH+F VVLED+SSNR   NASP      D  DRKR RR
Sbjct: 135 AGKDFAYDGEKSLFTVGPLPRNKHEFIVVLEDVSSNRVNGNASPDAG---DGNDRKRMRR 191

Query: 544 PFQSKTFKVAISFAAKIPMKAIALALRGQESESSQDALRVLDIILRQHAAKQGCLLVRQS 723
           PF SKTFKV ISFAAKIPM+AIA ALRGQESE+SQ+ALRVLDIILRQHAAKQGCLLVRQS
Sbjct: 192 PFHSKTFKVEISFAAKIPMQAIANALRGQESENSQEALRVLDIILRQHAAKQGCLLVRQS 251

Query: 724 FFHNNPRNFCDLGGGVLGCRGFHSSFRATHGGLSLNIDVSTTMIIQPGPVVDFLIANQNV 903
           FFHN+ +NF DLGGGV+GCRGFHSSFR T GGLSLN+DVSTTMI+QPGPVVDFLIANQN 
Sbjct: 252 FFHNDAKNFADLGGGVVGCRGFHSSFRTTQGGLSLNVDVSTTMIVQPGPVVDFLIANQNA 311

Query: 904 RDPYGIDWAKAKRTLKNLRIKASPSNTEYKI 996
           RDP+ +DWAKAKRTLKNLRIK SP+NTEYKI
Sbjct: 312 RDPFSLDWAKAKRTLKNLRIKTSPANTEYKI 342


Top