BLASTX nr result

ID: Coptis23_contig00008558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008558
         (1029 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532483.1| zinc finger protein, putative [Ricinus commu...   163   7e-38
ref|XP_002263942.2| PREDICTED: MORC family CW-type zinc finger p...   154   3e-35
ref|NP_001058096.1| Os06g0622000 [Oryza sativa Japonica Group] g...   135   2e-29
gb|EEE66033.1| hypothetical protein OsJ_22008 [Oryza sativa Japo...   135   2e-29
gb|EEC80993.1| hypothetical protein OsI_23737 [Oryza sativa Indi...   134   4e-29

>ref|XP_002532483.1| zinc finger protein, putative [Ricinus communis]
           gi|223527808|gb|EEF29907.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 754

 Score =  163 bits (412), Expect = 7e-38
 Identities = 107/279 (38%), Positives = 154/279 (55%), Gaps = 8/279 (2%)
 Frame = -1

Query: 813 LMKDTKLISHVRYVNSPIKLP-SLNICRIKAAATFDLL-GLSLFYLHPAFKNDHEQKEWM 640
           LMKD K I   + +N P ++P S NI  I   +  ++  GL   +L PA +N+ +Q EW 
Sbjct: 38  LMKDGKPICRTQCLNPPAEVPQSWNIHDIIPRSKMNIYDGLPHCFLRPAAENNRDQNEWQ 97

Query: 639 TFTQHLQKHNRVAHVVVEAYELYIHPPDLGTGFIDAIVLYKRRNKVDSVGRFHNYRSEEA 460
            F  +LQK N V     E    YI PP     F    V Y+ +       ++ + +  E+
Sbjct: 98  RFLSYLQKRNSVGIAKFEFCNFYILPPAEAYNFSHVKVAYREKTS----NKYSHQKHCES 153

Query: 459 VVETSVACTNSE-SLDPMGVATTACTITSEGTGESLDDSARKRDFKTLNANHTTDRVCEQ 283
           VV+T+ AC     +LDP+    T  + ++E      +   +  D   +  N T+     Q
Sbjct: 154 VVDTTEACQFVGCNLDPVETCGTVPSQSAERFTARKNVHMKASDQGIIEDNETSYVKFSQ 213

Query: 282 TSGHLHGFESK---KGVTCKPNDCVEKNYVQTNPSYLRTLGQTHSGWVFGAIVELVDNSR 112
           + G   G E     +    K +  + +NYV+ +PSYL+TLGQ HSGW+FGAI ELVDNSR
Sbjct: 214 SIGDPLGHEPTIRHQRRAVKQDGPLMENYVRADPSYLQTLGQAHSGWIFGAIAELVDNSR 273

Query: 111 DANATKLDILIESV--KKDGKEIPMLSVIDDGDGMSHQE 1
           DA A++LDILIE++  K+ GK+IPMLS+IDDG GM+HQE
Sbjct: 274 DAKASRLDILIETIYSKRAGKDIPMLSIIDDGHGMTHQE 312


>ref|XP_002263942.2| PREDICTED: MORC family CW-type zinc finger protein 2B-like [Vitis
           vinifera]
          Length = 760

 Score =  154 bits (389), Expect = 3e-35
 Identities = 109/308 (35%), Positives = 150/308 (48%), Gaps = 37/308 (12%)
 Frame = -1

Query: 813 LMKDTKLISHVRYVNSPIKLPSL-NICRIKAAATFDLLG-LSLFYLHPAFKNDHEQKEWM 640
           L KD K I   + +N P ++P   NI  I    T   L  L   +L PA +N  +Q+EW 
Sbjct: 2   LTKDQKSICRTQCLNPPFQMPPFWNISTIVREKTIHFLNELPHCFLRPAPQNSRDQREWR 61

Query: 639 TFTQHLQKHNRVAHVVVEAYELYIHPPDLGTGFIDAIVLYK--RRNKVDSVGRFHNYRSE 466
            F   LQK+  VA    + YELYI PP  G+ F  A+V Y+  + +KVD      N  S+
Sbjct: 62  IFLGFLQKNMMVAVAKFQLYELYILPPTEGSNFSHAVVAYRLVKVHKVDDSKT--NGISD 119

Query: 465 EAVVE-------------------------TSVACTNSESLDPMGVATTACTITSEGTGE 361
           E +++                         ++ AC NS  + P G        T++   +
Sbjct: 120 ETMIQPVQLLSPEASSHTNQTRRCMQPSTTSTNACINSRPVSPFGETVVPSCFTAKEFAD 179

Query: 360 SLDDSARKRDFKTLNANHTTDRVCEQTSGH------LHGFESKKGVTCKPNDCVEKNYVQ 199
             D     R           ++  + T  +         +   +    K +   EKNYV+
Sbjct: 180 RSDAYKTGRCSANSVDRCPHNKFTQDTGDYNTLDFETQAYTRSQLNAVKQDGHSEKNYVR 239

Query: 198 TNPSYLRTLGQTHSGWVFGAIVELVDNSRDANATKLDILIESV--KKDGKEIPMLSVIDD 25
            +PSYL+TLGQ HSGW+FGAI ELVDNSRDA ATKL I IE +  KK G++IPMLSV DD
Sbjct: 240 ADPSYLKTLGQAHSGWIFGAIAELVDNSRDAKATKLGISIEMIYSKKAGEDIPMLSVKDD 299

Query: 24  GDGMSHQE 1
           G GM+H+E
Sbjct: 300 GQGMTHKE 307


>ref|NP_001058096.1| Os06g0622000 [Oryza sativa Japonica Group]
           gi|51090841|dbj|BAD35369.1| Zinc finger CW-type
           coiled-coil domain protein 3-like [Oryza sativa Japonica
           Group] gi|113596136|dbj|BAF20010.1| Os06g0622000 [Oryza
           sativa Japonica Group]
          Length = 792

 Score =  135 bits (339), Expect = 2e-29
 Identities = 106/318 (33%), Positives = 154/318 (48%), Gaps = 30/318 (9%)
 Frame = -1

Query: 864 MSPELLSLNIPPEEE-------IRLMKDTKLISHVRYVNSPIKLPSL-NICRIKAAATFD 709
           M+ E L LN PP E        + L KD+K I   +  + P+K+PS+ +I R      + 
Sbjct: 1   MADETLDLNEPPHENQGGGLNYVLLQKDSKNICRTKVCDIPVKVPSVWSIVRFVPTKVYQ 60

Query: 708 LLGLSLFYLHPAFKNDHEQKEWMTFTQHLQKHNRVAHVVVEAYELYIHPPDLGTG----- 544
                 F L P  ++D +  EW  F + L  + RVA V   ++ L+I PP          
Sbjct: 61  QCDFLKFSLLPEPEDDRQNIEWGKFMRFLWDNQRVAVVRFSSFALHIFPPQSHESHERPN 120

Query: 543 FIDAIVLYKRRNKVD-------SVGRFHNYRSEEAVVETSVACTNSESLDPMGVATTACT 385
           F  A+V+Y++++  D       S     +YRS+            S S++P         
Sbjct: 121 FSHAVVMYEQKDPGDCKPMAGVSDALKRSYRSD----------FQSGSMNPKSYLR---- 166

Query: 384 ITSEGTGESLDDSARKRDFKTLNANHTTD--------RVCEQTSGHLHGFESKKGVTCKP 229
                  E + DS      K +NA+  T+          CE       G      +  K 
Sbjct: 167 -------EEICDSGPNP--KEMNASRVTELHKSVPESSPCESVED---GPRILDPIVKKR 214

Query: 228 NDCVEKNYVQTNPSYLRTLGQTHSGWVFGAIVELVDNSRDANATKLDILIESV--KKDGK 55
              + KN+V T+PSYLRTL QTH+GWVFGAI EL+DNSRDA+A++L+I ++S+  KK  K
Sbjct: 215 TTTLAKNFVSTDPSYLRTLSQTHAGWVFGAIAELIDNSRDADASRLNISVKSLFSKKADK 274

Query: 54  EIPMLSVIDDGDGMSHQE 1
           +IP+LSVIDDG GM+  E
Sbjct: 275 KIPVLSVIDDGHGMTCAE 292


>gb|EEE66033.1| hypothetical protein OsJ_22008 [Oryza sativa Japonica Group]
          Length = 800

 Score =  135 bits (339), Expect = 2e-29
 Identities = 106/318 (33%), Positives = 154/318 (48%), Gaps = 30/318 (9%)
 Frame = -1

Query: 864 MSPELLSLNIPPEEE-------IRLMKDTKLISHVRYVNSPIKLPSL-NICRIKAAATFD 709
           M+ E L LN PP E        + L KD+K I   +  + P+K+PS+ +I R      + 
Sbjct: 1   MADETLDLNEPPHENQGGGLNYVLLQKDSKNICRTKVCDIPVKVPSVWSIVRFVPTKVYQ 60

Query: 708 LLGLSLFYLHPAFKNDHEQKEWMTFTQHLQKHNRVAHVVVEAYELYIHPPDLGTG----- 544
                 F L P  ++D +  EW  F + L  + RVA V   ++ L+I PP          
Sbjct: 61  QCDFLKFSLLPEPEDDRQNIEWGKFMRFLWDNQRVAVVRFSSFALHIFPPQSHESHERPN 120

Query: 543 FIDAIVLYKRRNKVD-------SVGRFHNYRSEEAVVETSVACTNSESLDPMGVATTACT 385
           F  A+V+Y++++  D       S     +YRS+            S S++P         
Sbjct: 121 FSHAVVMYEQKDPGDCKPMAGVSDALKRSYRSD----------FQSGSMNPKSYLR---- 166

Query: 384 ITSEGTGESLDDSARKRDFKTLNANHTTD--------RVCEQTSGHLHGFESKKGVTCKP 229
                  E + DS      K +NA+  T+          CE       G      +  K 
Sbjct: 167 -------EEICDSGPNP--KEMNASRVTELHKSVPESSPCESVED---GPRILDPIVKKR 214

Query: 228 NDCVEKNYVQTNPSYLRTLGQTHSGWVFGAIVELVDNSRDANATKLDILIESV--KKDGK 55
              + KN+V T+PSYLRTL QTH+GWVFGAI EL+DNSRDA+A++L+I ++S+  KK  K
Sbjct: 215 TTTLAKNFVSTDPSYLRTLSQTHAGWVFGAIAELIDNSRDADASRLNISVKSLFSKKADK 274

Query: 54  EIPMLSVIDDGDGMSHQE 1
           +IP+LSVIDDG GM+  E
Sbjct: 275 KIPVLSVIDDGHGMTCAE 292


>gb|EEC80993.1| hypothetical protein OsI_23737 [Oryza sativa Indica Group]
          Length = 766

 Score =  134 bits (337), Expect = 4e-29
 Identities = 105/315 (33%), Positives = 153/315 (48%), Gaps = 30/315 (9%)
 Frame = -1

Query: 864 MSPELLSLNIPPEEE-------IRLMKDTKLISHVRYVNSPIKLPSL-NICRIKAAATFD 709
           M+ E L LN PP E        + L KD+K I   +  + P+K+PS+ +I R      + 
Sbjct: 1   MADETLDLNEPPHENQGGGLNYVLLQKDSKNICRTKVCDIPVKVPSVWSIVRFVPTKVYQ 60

Query: 708 LLGLSLFYLHPAFKNDHEQKEWMTFTQHLQKHNRVAHVVVEAYELYIHPPDLGTG----- 544
                 F L P  ++D +  EW  F + L  + RVA V   ++ L+I PP          
Sbjct: 61  QCDFLKFSLLPEPEDDRQNIEWGKFMRFLWDNQRVAVVRFSSFALHIFPPQSHESHERPN 120

Query: 543 FIDAIVLYKRRNKVD-------SVGRFHNYRSEEAVVETSVACTNSESLDPMGVATTACT 385
           F  A+V+Y++++  D       S     +YRS+            S S++P         
Sbjct: 121 FSHAVVMYEQKDPGDCKPMAGVSDALKRSYRSD----------FQSGSMNPKSYLR---- 166

Query: 384 ITSEGTGESLDDSARKRDFKTLNANHTTD--------RVCEQTSGHLHGFESKKGVTCKP 229
                  E + DS      K +NA+  T+          CE       G      +  K 
Sbjct: 167 -------EEICDSGPNP--KEMNASRVTELHKSVPESSPCESVED---GPRILDPIVKKR 214

Query: 228 NDCVEKNYVQTNPSYLRTLGQTHSGWVFGAIVELVDNSRDANATKLDILIESV--KKDGK 55
              + KN+V T+PSYLRTL QTH+GWVFGAI EL+DNSRDA+A++L+I ++S+  KK  K
Sbjct: 215 TTTLAKNFVSTDPSYLRTLSQTHAGWVFGAIAELIDNSRDADASRLNISVKSLFSKKADK 274

Query: 54  EIPMLSVIDDGDGMS 10
           +IP+LSVIDDG GM+
Sbjct: 275 KIPVLSVIDDGAGMT 289


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