BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008549
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312512.1| predicted protein [Populus trichocarpa] gi|2...    60   3e-07
ref|ZP_11319844.1| putative SAM-dependent methyltransferase [The...    59   5e-07
ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    59   7e-07

>ref|XP_002312512.1| predicted protein [Populus trichocarpa] gi|222852332|gb|EEE89879.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 41/115 (35%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
 Frame = +1

Query: 241 ICINYKGREIAFYLVLGCHLKMTVKLNVDGASRGNPGPAGIGC--RNASGGFEFVYSRNI 414
           +CI+   + + FY    C L+       DGAS+GNPG AG G   RN  G         +
Sbjct: 162 LCIHGAKKTLIFYSQKSCLLEF------DGASKGNPGQAGAGAVLRNDDGSLICRLREGL 215

Query: 415 GIATNFIAECTTIQEGIETALNRGKTAIWVKSDSTAAVTAFNFDKIPWQLKGRWR 579
           GIATN +AE   I  G++ AL +G T I VK DS           +  Q++G W+
Sbjct: 216 GIATNNMAEYRAILLGMKYALEKGYTKIHVKGDSKL---------VCMQIEGSWK 261


>ref|ZP_11319844.1| putative SAM-dependent methyltransferase [Thermaerobacter
           subterraneus DSM 13965] gi|410505558|gb|EKP95067.1|
           putative SAM-dependent methyltransferase
           [Thermaerobacter subterraneus DSM 13965]
          Length = 504

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = +1

Query: 313 KLNVDGASRGNPGPAGIGCR--NASGGFEFVYSRNIGIATNFIAECTTIQEGIETALNRG 486
           +L+ DGA+RGNPGPAGIG       G      +R IG ATN +AE T +  G++ AL+RG
Sbjct: 365 RLHTDGAARGNPGPAGIGVVLIGPDGAVAERIARFIGAATNNVAEYTALITGLQRALDRG 424

Query: 487 KTAIWVKSDSTAAVTAFN 540
              + V SDS   V   N
Sbjct: 425 ARRLDVYSDSELMVRQLN 442


>ref|XP_002314708.1| predicted protein [Populus trichocarpa] gi|222863748|gb|EEF00879.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
 Frame = +1

Query: 310 VKLNVDGASRGNPGPAGIG--CRNASGGFEFVYSRNIGIATNFIAECTTIQEGIETALNR 483
           +KLNVDG S+GNPG AG G   R+  G +   ++RNIGI ++  AE   +  G++ A +R
Sbjct: 84  IKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDR 143

Query: 484 GKTAIWVKSDSTAAVTAFNFDKI 552
           G   + ++SDS   V   N D +
Sbjct: 144 GFRKVDLESDSKVVVGLINGDSV 166


>ref|XP_002309989.1| predicted protein [Populus trichocarpa] gi|222852892|gb|EEE90439.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
 Frame = +1

Query: 310 VKLNVDGASRGNPGPAGIG--CRNASGGFEFVYSRNIGIATNFIAECTTIQEGIETALNR 483
           +KLNVDG S+GNPG AG G   R+  G +   ++RNIGI ++  AE   +  G++ A +R
Sbjct: 84  IKLNVDGCSKGNPGVAGAGGVIRDHLGAWIGGFARNIGICSSVNAELWAVYVGLQLAWDR 143

Query: 484 GKTAIWVKSDSTAAVTAFNFDKI 552
           G   + ++SDS   V   N D +
Sbjct: 144 GFRKVDLESDSKVVVGLINGDSV 166


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 33/94 (35%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
 Frame = +1

Query: 310  VKLNVDGASRGNPGPAGIGCRNASGGFEFVYSRNIGIATNFIAECTTIQEGIETALNRGK 489
            +K+N DG+  G     G   R++SG F   +S NIG+A+ F AE       +E A + G 
Sbjct: 1023 LKVNTDGSVVGGLAACGGLFRDSSGSFLGAFSCNIGLASVFHAETLAFILALEHAAHHGW 1082

Query: 490  TAIWVKSDSTAAVTAF-NFDKIPWQLKGRWREVK 588
              +W++SDST+A+  F N   + W L+ RW   +
Sbjct: 1083 RNLWLESDSTSALMIFSNSSLVQWLLRNRWHNAQ 1116