BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008548
         (865 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containin...   164   2e-38
emb|CBI28616.3| unnamed protein product [Vitis vinifera]              156   5e-36
ref|XP_002441761.1| hypothetical protein SORBIDRAFT_08g001980 [S...   117   3e-24
ref|XP_003539900.1| PREDICTED: zinc finger CCCH domain-containin...   105   1e-20
ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containin...   104   2e-20

>ref|XP_003534377.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Glycine max]
          Length = 700

 Score =  164 bits (416), Expect = 2e-38
 Identities = 113/284 (39%), Positives = 142/284 (50%), Gaps = 73/284 (25%)
 Frame = -1

Query: 634 MDAYEATRIVFSRIQSIDPENAAKIMGFLLIQDHGDKEMIRLAFGPESLMHS-------- 479
           MD YEATRIVFSRIQ++DPENA+KIMG LL+QDHG+KEMIRLAFGPE+L+HS        
Sbjct: 1   MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHSVILKARKE 60

Query: 478 --------PTASLFFPXXXXXXXXXXXXXXXXSADFNV-------------------LSP 380
                   PT S   P                 +  N+                   +SP
Sbjct: 61  LGLPSNSPPTPST--PPSPSPFLSRQNSTSSRLSGINIPPALTIPNPSSWPTMSDDLMSP 118

Query: 379 NG-------------FHHNVKSNHIDEFHLQDHLSFLEEGPK---------DPDLFFPSS 266
           N              ++ N  S+ ID+F LQD LSFL +G           +PDLF+P++
Sbjct: 119 NHLVVGSSTSSSSLPYYANGGSDPIDDFQLQDQLSFLNDGSPTSTAFAHKTNPDLFYPTN 178

Query: 265 XXXXXXXXXXXFNSPP-PNWGVNNEQHRHSLSVTD--IGS-DP---FGWKPCLYYARGYC 107
                       +    P++G     HR S SV D  +GS DP    GWKPCLY+ARGYC
Sbjct: 179 NSDLSSSPTTAVDPTLFPSYGWGGSIHRRSCSVNDACLGSEDPSSGLGWKPCLYFARGYC 238

Query: 106 KNGTSCRFLHESPDSTAFG---------GEFDVMDQCRELLRSR 2
           KNGTSCRFLH        G         G+ ++M+QC ELLRS+
Sbjct: 239 KNGTSCRFLHGGIGDADGGGAAAMVGSPGKIEMMEQCHELLRSK 282


>emb|CBI28616.3| unnamed protein product [Vitis vinifera]
          Length = 672

 Score =  156 bits (395), Expect = 5e-36
 Identities = 99/227 (43%), Positives = 121/227 (53%), Gaps = 16/227 (7%)
 Frame = -1

Query: 634 MDAYEATRIVFSRIQSIDPENAAKIMGFLLIQDHGDKEMIRLAFGPESLMHSPTASLFFP 455
           MDAYEATRIVFSRIQ++DPENA+KIMG LLIQDHG+KEMIRLAFGPE+L+HS        
Sbjct: 1   MDAYEATRIVFSRIQNLDPENASKIMGLLLIQDHGEKEMIRLAFGPEALVHSVILKARKE 60

Query: 454 XXXXXXXXXXXXXXXXSADFNVLSPNGFHHNVKSNHIDEFHLQDHLSFLEEGPKDPDLFF 275
                            + F  LS N    + +++            F +  P+D DL  
Sbjct: 61  LGISSNTPSTPSTPSSPSPF--LSNNPLSQSRQTSFSSTSSPSSFSVFSDFQPQD-DLIS 117

Query: 274 PSSXXXXXXXXXXXFNSPPPNWGVNNEQHRHSLSVTDI---GSDP---FGWKPCLYYARG 113
           P+S                     N   HR S SV+DI     DP   FGWKPCLY+ARG
Sbjct: 118 PNSA------------------AANGLPHRRSCSVSDICLASDDPASGFGWKPCLYFARG 159

Query: 112 YCKNGTSCRFLHESPDSTAFGGE----------FDVMDQCRELLRSR 2
           YCKNGTSCRFLH    ++  G E           ++M+QC ELLRS+
Sbjct: 160 YCKNGTSCRFLHGGDSASVVGSEGAAMVGSPSKIEMMEQCHELLRSK 206


>ref|XP_002441761.1| hypothetical protein SORBIDRAFT_08g001980 [Sorghum bicolor]
           gi|241942454|gb|EES15599.1| hypothetical protein
           SORBIDRAFT_08g001980 [Sorghum bicolor]
          Length = 637

 Score =  117 bits (293), Expect = 3e-24
 Identities = 76/205 (37%), Positives = 101/205 (49%), Gaps = 15/205 (7%)
 Frame = -1

Query: 634 MDAYEATRIVFSRIQSIDPENAAKIMGFLLIQDHGDKEMIRLAFGPESLMH----SPTAS 467
           MDA+EAT+ VF R++++DP+NA+KIMG LLIQD+ DKE+IRLAFGP+ L+H    +  A 
Sbjct: 1   MDAWEATKAVFDRVRALDPDNASKIMGLLLIQDNSDKELIRLAFGPDHLLHAFVAAARAD 60

Query: 466 LFFPXXXXXXXXXXXXXXXXSADFNVLSPNGFHHNVKSNHIDEFHLQDH-LSFLEEG--- 299
           L                    A      P+  HH     H   F   DH L +  +G   
Sbjct: 61  LAASSKPASPPSPVLGPLHQPASPWGPPPSDHHH----QHQSPFSAADHALGYDYDGAAA 116

Query: 298 ---PKDPDLFFPSSXXXXXXXXXXXFNSPPPNWGVNNEQHRHSLSVTDI----GSDPFGW 140
              P   D FFP                  P  G     HR S S++D      +    W
Sbjct: 117 AAAPASADAFFPDDYDCW-----------SPAGGAT--AHRRSFSLSDAEVAGAAGAGAW 163

Query: 139 KPCLYYARGYCKNGTSCRFLHESPD 65
           +PC+Y+ARG+CKNG+SCRFLH  P+
Sbjct: 164 RPCMYFARGFCKNGSSCRFLHGLPE 188


>ref|XP_003539900.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Glycine max]
          Length = 698

 Score =  105 bits (263), Expect = 1e-20
 Identities = 65/147 (44%), Positives = 83/147 (56%), Gaps = 18/147 (12%)
 Frame = -1

Query: 388 LSPNGFHHNVKSNHIDEFHLQDHLSFLEEGPK-------DPDLFFPSSXXXXXXXXXXXF 230
           LS   F+ N  S+ IDEF LQD LSFL +G         +PDLF+P+             
Sbjct: 130 LSSLPFYANGGSDPIDEFQLQDQLSFLNDGSNTSISHKNNPDLFYPTYSDFSSSPTTAAD 189

Query: 229 NSPPPNWGVNNEQHRHSLSVTD--IGS-DP---FGWKPCLYYARGYCKNGTSCRFLH--- 77
            +  P++G     HR S SV D  +G+ DP    GWKPCLY+ARGYCKNGTSCRFLH   
Sbjct: 190 PTLFPSYGWGGSLHRRSCSVNDACLGTEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGL 249

Query: 76  ESPDSTAFG--GEFDVMDQCRELLRSR 2
              D+   G   + ++M+QC ELLRS+
Sbjct: 250 GDADAAMVGSPSKIEMMEQCHELLRSK 276



 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 42/52 (80%), Positives = 50/52 (96%)
 Frame = -1

Query: 634 MDAYEATRIVFSRIQSIDPENAAKIMGFLLIQDHGDKEMIRLAFGPESLMHS 479
           MD+YEATRIVFSRIQ++D ENA+KIMG LL+QDHG+KEMIRLAFGPE+L+HS
Sbjct: 1   MDSYEATRIVFSRIQNLDAENASKIMGLLLLQDHGEKEMIRLAFGPEALVHS 52


>ref|XP_003539907.1| PREDICTED: zinc finger CCCH domain-containing protein 53-like
           [Glycine max]
          Length = 704

 Score =  104 bits (260), Expect = 2e-20
 Identities = 62/144 (43%), Positives = 82/144 (56%), Gaps = 20/144 (13%)
 Frame = -1

Query: 373 FHHNVKSNHIDEFHLQDHLSFLEEGP---------KDPDLFFPSSXXXXXXXXXXXFNSP 221
           F+ N  S+ IDEF LQD L+FL +G           +PD+F+PS+             + 
Sbjct: 140 FYANGGSDPIDEFQLQDQLAFLNDGSPTSTALSHKNNPDMFYPSNSDLSSSPTTAADPTL 199

Query: 220 PPNWGVNNEQHRHSLSVTD--IGS-DP---FGWKPCLYYARGYCKNGTSCRFLH---ESP 68
            P++G     HR S SV D  +G+ DP    GWKPCLY+ARGYCKNGTSCRFLH      
Sbjct: 200 FPSYGWGGSLHRRSCSVNDACLGTEDPNSGLGWKPCLYFARGYCKNGTSCRFLHGGLGDA 259

Query: 67  DSTAFG--GEFDVMDQCRELLRSR 2
           D+   G   + ++M+QC ELLRS+
Sbjct: 260 DAAMVGSPSKIEMMEQCHELLRSK 283



 Score = 93.6 bits (231), Expect = 5e-17
 Identities = 43/52 (82%), Positives = 50/52 (96%)
 Frame = -1

Query: 634 MDAYEATRIVFSRIQSIDPENAAKIMGFLLIQDHGDKEMIRLAFGPESLMHS 479
           MD YEATRIVFSRIQ++DPENA+KIMG LL+QDHG+KEMIRLAFGPE+L+HS
Sbjct: 1   MDGYEATRIVFSRIQNLDPENASKIMGVLLLQDHGEKEMIRLAFGPEALVHS 52