BLASTX nr result

ID: Coptis23_contig00008547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008547
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39372.1| unknown [Medicago truncatula]                          102   3e-20
ref|XP_003609315.1| Solute carrier family 35 member C2 [Medicago...   102   3e-20
gb|ABR18030.1| unknown [Picea sitchensis]                             101   6e-20
ref|XP_002442696.1| hypothetical protein SORBIDRAFT_08g001300 [S...   100   9e-20
gb|AFW55842.1| hypothetical protein ZEAMMB73_528745 [Zea mays]        100   1e-19

>gb|AFK39372.1| unknown [Medicago truncatula]
          Length = 345

 Score =  102 bits (254), Expect = 3e-20
 Identities = 57/95 (60%), Positives = 59/95 (62%)
 Frame = -2

Query: 513 LLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTTINLAGYGVVFLGVCYYNXXXXXXX 334
           LLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVT INL GYG+ FLGV YYN       
Sbjct: 250 LLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLIGYGLAFLGVAYYNHSKLQAL 309

Query: 333 XXXXXXXKPQQTDXXXXXXXXXXXXXXXXEKSDSQ 229
                  K QQ+D                 KSDSQ
Sbjct: 310 KASETQKKAQQSDEEAGRLLEQRDGEGTGRKSDSQ 344


>ref|XP_003609315.1| Solute carrier family 35 member C2 [Medicago truncatula]
           gi|355510370|gb|AES91512.1| Solute carrier family 35
           member C2 [Medicago truncatula]
          Length = 345

 Score =  102 bits (254), Expect = 3e-20
 Identities = 57/95 (60%), Positives = 59/95 (62%)
 Frame = -2

Query: 513 LLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTTINLAGYGVVFLGVCYYNXXXXXXX 334
           LLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVT INL GYG+ FLGV YYN       
Sbjct: 250 LLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLIGYGLAFLGVAYYNHSKLQAL 309

Query: 333 XXXXXXXKPQQTDXXXXXXXXXXXXXXXXEKSDSQ 229
                  K QQ+D                 KSDSQ
Sbjct: 310 KASETQKKAQQSDEEAGRLLEQRDGEGTGRKSDSQ 344


>gb|ABR18030.1| unknown [Picea sitchensis]
          Length = 357

 Score =  101 bits (252), Expect = 6e-20
 Identities = 46/53 (86%), Positives = 50/53 (94%)
 Frame = -2

Query: 513 LLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTTINLAGYGVVFLGVCYYN 355
           LL+GKTSALTMNVAGVVKDWLLIAFSWS+IKDTVT +NL GYG+ FLGVCYYN
Sbjct: 259 LLIGKTSALTMNVAGVVKDWLLIAFSWSIIKDTVTPVNLLGYGLAFLGVCYYN 311


>ref|XP_002442696.1| hypothetical protein SORBIDRAFT_08g001300 [Sorghum bicolor]
           gi|241943389|gb|EES16534.1| hypothetical protein
           SORBIDRAFT_08g001300 [Sorghum bicolor]
          Length = 384

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = -2

Query: 513 LLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTTINLAGYGVVFLGVCYYN 355
           LLVGKTSALTMNVAGVVKDWLLIAFSW+VIKDTVT +NLAGYG+ FLGV YYN
Sbjct: 283 LLVGKTSALTMNVAGVVKDWLLIAFSWTVIKDTVTAVNLAGYGIAFLGVAYYN 335


>gb|AFW55842.1| hypothetical protein ZEAMMB73_528745 [Zea mays]
          Length = 383

 Score =  100 bits (249), Expect = 1e-19
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = -2

Query: 513 LLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTTINLAGYGVVFLGVCYYN 355
           LLVGKTSALTMNVAGVVKDWLLIAFSW+VIKDTVT +NLAGYG+ FLGV YYN
Sbjct: 287 LLVGKTSALTMNVAGVVKDWLLIAFSWTVIKDTVTPVNLAGYGIAFLGVAYYN 339


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