BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008538
         (1422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277742.1| PREDICTED: histone deacetylase 2 [Vitis vini...   571   e-160
ref|XP_003589022.1| Histone deacetylase [Medicago truncatula] gi...   535   e-149
gb|AFK34923.1| unknown [Lotus japonicus]                              534   e-149
ref|XP_003550277.1| PREDICTED: histone deacetylase 2-like [Glyci...   532   e-148
ref|NP_001057914.1| Os06g0571100 [Oryza sativa Japonica Group] g...   519   e-145

>ref|XP_002277742.1| PREDICTED: histone deacetylase 2 [Vitis vinifera]
            gi|296081627|emb|CBI20632.3| unnamed protein product
            [Vitis vinifera]
          Length = 359

 Score =  571 bits (1471), Expect = e-160
 Identities = 274/329 (83%), Positives = 309/329 (93%)
 Frame = -1

Query: 1212 RVLSSKLYFDVPQSKVPLIYSPAYNIAFFGIEKLHPFDSSKWGRICQFLIAEGVLDRNRV 1033
            R+LSSKLYFDVP +KVP+IYS +Y+IAF G+EKLHPFDSSKWGRIC+FLI +G L++N +
Sbjct: 27   RILSSKLYFDVPLTKVPIIYSSSYDIAFLGMEKLHPFDSSKWGRICRFLILDGALEKNHI 86

Query: 1032 VEPLEASKEDLLVVHSESYLNSLKNSLNVSIIMEVPPVALLPNCVVQQKALYPFRKQVGG 853
            VEPLEASK+DLLVVHSESYLNSLK SLNV++I+EVPPVALLPNC+VQQK LYPFRKQVGG
Sbjct: 87   VEPLEASKDDLLVVHSESYLNSLKTSLNVAVIIEVPPVALLPNCLVQQKVLYPFRKQVGG 146

Query: 852  TILAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHYAFIRLNISRVMIIDLD 673
            TILAAKLAKERGWAINVGGGFHHCSA KGGGFCAYADISLCIHYAFIRLNISRVMIIDLD
Sbjct: 147  TILAAKLAKERGWAINVGGGFHHCSAGKGGGFCAYADISLCIHYAFIRLNISRVMIIDLD 206

Query: 672  AHQGNGHEMDFSNDRRVFILDMYNPDIYPHDFEARRFIDKKVEVPTGTTTDVYLERLDKA 493
            AHQGNGHE+DFSNDRRV+ILDMYNP IYP DFEARR+ID+KVEV +GTTT+ YL +LD+A
Sbjct: 207  AHQGNGHELDFSNDRRVYILDMYNPGIYPSDFEARRYIDQKVEVVSGTTTNEYLTKLDEA 266

Query: 492  LEVAGNIFEPELVVYNAGTDILDGDPLGGLKISPNGVISRDEKVFKFAKDKKIPLVMLTS 313
            L+VAG +F+PELVVYNAGTDILDGDPLG LKISP GV SRDEKVF+FA++KKIPL+MLTS
Sbjct: 267  LKVAGRMFDPELVVYNAGTDILDGDPLGRLKISPEGVTSRDEKVFRFAREKKIPLIMLTS 326

Query: 312  GGYMKSSAKVIADSVVNLTKKCLIDLEST 226
            GGYMKSSAKVIADS+VNL++KCLID  S+
Sbjct: 327  GGYMKSSAKVIADSIVNLSRKCLIDTGSS 355


>ref|XP_003589022.1| Histone deacetylase [Medicago truncatula] gi|355478070|gb|AES59273.1|
            Histone deacetylase [Medicago truncatula]
          Length = 350

 Score =  535 bits (1378), Expect = e-149
 Identities = 257/325 (79%), Positives = 297/325 (91%)
 Frame = -1

Query: 1212 RVLSSKLYFDVPQSKVPLIYSPAYNIAFFGIEKLHPFDSSKWGRICQFLIAEGVLDRNRV 1033
            R+LS+KLYFDVP SKVPLIYS +Y+I+F GIEKLHPFDSSKWGRIC+FLI+ GVLD+NR+
Sbjct: 18   RILSTKLYFDVPPSKVPLIYSDSYDISFLGIEKLHPFDSSKWGRICKFLISFGVLDKNRI 77

Query: 1032 VEPLEASKEDLLVVHSESYLNSLKNSLNVSIIMEVPPVALLPNCVVQQKALYPFRKQVGG 853
            VEPLEASK+DLLVVHSESYLNSLK S NV+ I+EVPPVAL PNC+VQ+K L+PFRKQVGG
Sbjct: 78   VEPLEASKDDLLVVHSESYLNSLKESSNVAKIIEVPPVALFPNCLVQRKVLFPFRKQVGG 137

Query: 852  TILAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHYAFIRLNISRVMIIDLD 673
            TILAAKLAKERGWAINVGGGFHHCSAE GGGFCAYADISLCIH+AF++LNISRV+IIDLD
Sbjct: 138  TILAAKLAKERGWAINVGGGFHHCSAENGGGFCAYADISLCIHFAFVQLNISRVIIIDLD 197

Query: 672  AHQGNGHEMDFSNDRRVFILDMYNPDIYPHDFEARRFIDKKVEVPTGTTTDVYLERLDKA 493
            AHQGNGHEMDF++D RV+ILDMYNP IYP D EAR +I++KVEV +GT T+ YL +LD+A
Sbjct: 198  AHQGNGHEMDFADDNRVYILDMYNPGIYPLDHEARSYINQKVEVKSGTRTEEYLLKLDEA 257

Query: 492  LEVAGNIFEPELVVYNAGTDILDGDPLGGLKISPNGVISRDEKVFKFAKDKKIPLVMLTS 313
            LEVAG  F PEL+VYNAGTDIL+GDPLG LKISP+G+  RDEKVF+FA+ K IP+VMLTS
Sbjct: 258  LEVAGRRFNPELLVYNAGTDILEGDPLGRLKISPDGIALRDEKVFRFARKKNIPIVMLTS 317

Query: 312  GGYMKSSAKVIADSVVNLTKKCLID 238
            GGYMKSSA+VIADS++NL KKCLI+
Sbjct: 318  GGYMKSSARVIADSILNLEKKCLIE 342


>gb|AFK34923.1| unknown [Lotus japonicus]
          Length = 348

 Score =  534 bits (1376), Expect = e-149
 Identities = 255/325 (78%), Positives = 295/325 (90%)
 Frame = -1

Query: 1212 RVLSSKLYFDVPQSKVPLIYSPAYNIAFFGIEKLHPFDSSKWGRICQFLIAEGVLDRNRV 1033
            R+LSSKLYFDVP SKVPLIYS +Y+I+F GIEKLHPFDSSKWGRIC FL++  VLD+  +
Sbjct: 17   RILSSKLYFDVPPSKVPLIYSESYDISFLGIEKLHPFDSSKWGRICGFLVSFDVLDKKCI 76

Query: 1032 VEPLEASKEDLLVVHSESYLNSLKNSLNVSIIMEVPPVALLPNCVVQQKALYPFRKQVGG 853
            VEPLEASK+DLLVVHSESYLNSLK S NV+ I+EVPPVAL PNC+VQ K L+PFRKQVGG
Sbjct: 77   VEPLEASKDDLLVVHSESYLNSLKESSNVATIIEVPPVALFPNCLVQNKVLFPFRKQVGG 136

Query: 852  TILAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHYAFIRLNISRVMIIDLD 673
            TILA KLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIH+AF+RLNISRVMIIDLD
Sbjct: 137  TILAVKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHFAFVRLNISRVMIIDLD 196

Query: 672  AHQGNGHEMDFSNDRRVFILDMYNPDIYPHDFEARRFIDKKVEVPTGTTTDVYLERLDKA 493
            AHQGNGHE DF++D RV+ILDMYNP IYP D++AR +I++KVEV +GT T+ YL++LD+A
Sbjct: 197  AHQGNGHETDFADDSRVYILDMYNPGIYPWDYDARNYINQKVEVKSGTLTEEYLQKLDEA 256

Query: 492  LEVAGNIFEPELVVYNAGTDILDGDPLGGLKISPNGVISRDEKVFKFAKDKKIPLVMLTS 313
            LEVA   F+PELV+YNAGTDILDGDPLG LKISP+G+  RDEKVF+FA++K IP+VMLTS
Sbjct: 257  LEVAARRFKPELVIYNAGTDILDGDPLGRLKISPDGIALRDEKVFRFAREKNIPIVMLTS 316

Query: 312  GGYMKSSAKVIADSVVNLTKKCLID 238
            GGYMKSSA+VIADS+VNL+KKCLI+
Sbjct: 317  GGYMKSSARVIADSIVNLSKKCLIE 341


>ref|XP_003550277.1| PREDICTED: histone deacetylase 2-like [Glycine max]
          Length = 348

 Score =  532 bits (1370), Expect = e-148
 Identities = 254/325 (78%), Positives = 296/325 (91%)
 Frame = -1

Query: 1212 RVLSSKLYFDVPQSKVPLIYSPAYNIAFFGIEKLHPFDSSKWGRICQFLIAEGVLDRNRV 1033
            R+LSSKLYFDV  SKVPLIYS +Y+I F GIEKLHPFDSSKWGRIC FL++ G+LD+  V
Sbjct: 16   RILSSKLYFDVSPSKVPLIYSASYDIEFLGIEKLHPFDSSKWGRICGFLVSFGILDKKCV 75

Query: 1032 VEPLEASKEDLLVVHSESYLNSLKNSLNVSIIMEVPPVALLPNCVVQQKALYPFRKQVGG 853
            VEPLEASK+DLLVVHSESYLN+LK S  V++I+EVPPVAL+PNC+VQQK L+PFRKQVGG
Sbjct: 76   VEPLEASKDDLLVVHSESYLNTLKQSSKVAMIVEVPPVALIPNCLVQQKVLFPFRKQVGG 135

Query: 852  TILAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHYAFIRLNISRVMIIDLD 673
            TILAAKLAKERGWAIN+GGGFHHCSA+KGGGFCAYADISLCIH+AF+RLNISRVMIIDLD
Sbjct: 136  TILAAKLAKERGWAINMGGGFHHCSAQKGGGFCAYADISLCIHFAFVRLNISRVMIIDLD 195

Query: 672  AHQGNGHEMDFSNDRRVFILDMYNPDIYPHDFEARRFIDKKVEVPTGTTTDVYLERLDKA 493
            AHQGNGHEMDF+ D RV+ILDMYNP IYP D+EAR +I++KVEV +GT T+ YL++LD+A
Sbjct: 196  AHQGNGHEMDFAYDSRVYILDMYNPGIYPLDYEARNYINQKVEVKSGTVTEEYLQKLDEA 255

Query: 492  LEVAGNIFEPELVVYNAGTDILDGDPLGGLKISPNGVISRDEKVFKFAKDKKIPLVMLTS 313
            LEVAG+ F PELV+YNAGTDIL+GDPLG L+ISP G+  RDEKVF+FA++K IP+VMLTS
Sbjct: 256  LEVAGHRFNPELVIYNAGTDILEGDPLGRLEISPEGITLRDEKVFRFAREKNIPIVMLTS 315

Query: 312  GGYMKSSAKVIADSVVNLTKKCLID 238
            GGYMKSSA VIADS+VNL+KKCLI+
Sbjct: 316  GGYMKSSAGVIADSIVNLSKKCLIE 340


>ref|NP_001057914.1| Os06g0571100 [Oryza sativa Japonica Group]
            gi|54291235|dbj|BAD61930.1| putative HDA2 [Oryza sativa
            Japonica Group] gi|113595954|dbj|BAF19828.1| Os06g0571100
            [Oryza sativa Japonica Group] gi|125555796|gb|EAZ01402.1|
            hypothetical protein OsI_23434 [Oryza sativa Indica
            Group] gi|215704748|dbj|BAG94776.1| unnamed protein
            product [Oryza sativa Japonica Group]
          Length = 352

 Score =  519 bits (1337), Expect = e-145
 Identities = 250/328 (76%), Positives = 295/328 (89%)
 Frame = -1

Query: 1212 RVLSSKLYFDVPQSKVPLIYSPAYNIAFFGIEKLHPFDSSKWGRICQFLIAEGVLDRNRV 1033
            R+LSSKLY DVP SK P++YSPAY+IAF GIEKLHPFDSSKWGRIC+FL  EG L++NRV
Sbjct: 22   RILSSKLYLDVPGSKAPVVYSPAYDIAFLGIEKLHPFDSSKWGRICKFLTKEGHLEKNRV 81

Query: 1032 VEPLEASKEDLLVVHSESYLNSLKNSLNVSIIMEVPPVALLPNCVVQQKALYPFRKQVGG 853
            VEPLEA+K+DLLVVHSESYLNSLK+SL V+ I+E+PPVA +PN +VQQK LYPFRKQVGG
Sbjct: 82   VEPLEATKDDLLVVHSESYLNSLKSSLKVASIVELPPVAFIPNWLVQQKLLYPFRKQVGG 141

Query: 852  TILAAKLAKERGWAINVGGGFHHCSAEKGGGFCAYADISLCIHYAFIRLNISRVMIIDLD 673
            +IL+AKLA ERGWAINVGGGFHHCSAE+GGGFCAYADISLCI +AF+RLNISRVMIIDLD
Sbjct: 142  SILSAKLALERGWAINVGGGFHHCSAEQGGGFCAYADISLCIQFAFVRLNISRVMIIDLD 201

Query: 672  AHQGNGHEMDFSNDRRVFILDMYNPDIYPHDFEARRFIDKKVEVPTGTTTDVYLERLDKA 493
            AHQGNGHE DF+ND RV+ LDMYN  IYP+D  A+R+ID+KVE+ +GT T+ YL++LDKA
Sbjct: 202  AHQGNGHEKDFANDGRVYTLDMYNAGIYPYDHVAKRYIDQKVELVSGTKTEDYLDQLDKA 261

Query: 492  LEVAGNIFEPELVVYNAGTDILDGDPLGGLKISPNGVISRDEKVFKFAKDKKIPLVMLTS 313
            L+VA + F+P+L+VYNAGTDILDGDPLG LKISP GV+ RDEKVF+FAKD+ IPL+MLTS
Sbjct: 262  LKVAESRFQPQLIVYNAGTDILDGDPLGRLKISPQGVVIRDEKVFRFAKDQSIPLLMLTS 321

Query: 312  GGYMKSSAKVIADSVVNLTKKCLIDLES 229
            GGYMKSSA+VIADS++NL+ K LI+L S
Sbjct: 322  GGYMKSSARVIADSIINLSNKNLIELGS 349