BLASTX nr result

ID: Coptis23_contig00008536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008536
         (761 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521941.1| PREDICTED: acyl-CoA synthetase family member...   227   2e-57
ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member...   223   3e-56
ref|XP_003627657.1| Acetyl-coenzyme A synthetase [Medicago trunc...   218   1e-54
dbj|BAA97455.1| unnamed protein product [Arabidopsis thaliana]        200   3e-49
ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arab...   194   2e-47

>ref|XP_003521941.1| PREDICTED: acyl-CoA synthetase family member 4-like [Glycine max]
          Length = 1153

 Score =  227 bits (578), Expect = 2e-57
 Identities = 121/258 (46%), Positives = 164/258 (63%), Gaps = 8/258 (3%)
 Frame = +2

Query: 8   MANEKSGEENNLCCISHLFYKTASLNPNNISVIHASAGAQICRQFRHLDNILLDYNSYR- 184
           M+ E   ++   CCISH F++TAS NPN I+ IHAS  A + RQF   ++   +++    
Sbjct: 1   MSAENESKKTQFCCISHEFFRTASANPNKIAAIHASGVAHLSRQFHRENSTAPNFDGDLA 60

Query: 185 -------ESHSNPYLKGDEFFTYSDVLSSVQSLSYRIRHVIDNPDDPLIRPPQDCIVNDE 343
                  ES S P   GD  FTYS V ++V+SLS+R+R +++             ++N+ 
Sbjct: 61  TLLEKRVESTSPPLYHGDRSFTYSRVSNAVRSLSFRLRSILEG------------VMNES 108

Query: 344 GVEETGGLRIIGIYMVPSVEYIVALLSVLRCGEAFLPLDPSWPKQRILSIISSSKVALIV 523
             E     +I+GIYM PSVEY+VA+LSVLRCGEAFLPLDP WP +RILS+  SS V LI+
Sbjct: 109 SREYRP--KIVGIYMPPSVEYVVAVLSVLRCGEAFLPLDPIWPNERILSVAYSSNVDLII 166

Query: 524 KSKSCFTATEDFQLEESDWLAEQSSCTVLEMSMNENHEKVFGCSELDWPCQSMRKRKFCY 703
            S+S F  +   +L+ES WL +  SC VL  S++EN +   G ++L WPC + ++R F Y
Sbjct: 167 GSQSSFGKSNLDKLDESHWLVKSISCPVLNYSIDENIQVCSGPTDLTWPCANEKRRSFSY 226

Query: 704 LMYTSGSTGKPKGVCGTE 757
           LMYTSGSTGKPKGVCGTE
Sbjct: 227 LMYTSGSTGKPKGVCGTE 244


>ref|XP_002265371.1| PREDICTED: acyl-CoA synthetase family member 4 [Vitis vinifera]
           gi|296088768|emb|CBI38218.3| unnamed protein product
           [Vitis vinifera]
          Length = 1175

 Score =  223 bits (568), Expect = 3e-56
 Identities = 122/265 (46%), Positives = 157/265 (59%), Gaps = 22/265 (8%)
 Frame = +2

Query: 29  EENNLCCISHLFYKTASLNPNNISVIHASAGAQICRQFRHLDNILLDYNSYRESHSNPYL 208
           E    CCISH F + A  NPN I+VI AS  AQ+  Q            S   SH  P  
Sbjct: 14  EGQEWCCISHSFQRVALKNPNKIAVIQASPTAQLHNQ------------SLASSHIPPPY 61

Query: 209 KGDEFFTYSDVLSSVQSLSYRIRHVIDNPDDP-LIRPPQDCIVND--------------- 340
            GD  FT+S +  ++ SLS+R+R ++    DP LI P  + +  +               
Sbjct: 62  HGDRSFTFSHLFDAIDSLSFRLRSILAGAQDPFLINPTGNYLCRNQLEHAPFSLSSTSYK 121

Query: 341 ------EGVEETGGLRIIGIYMVPSVEYIVALLSVLRCGEAFLPLDPSWPKQRILSIISS 502
                 E ++     +I+GIYMVPSVEYI+A+LSVLRCGEAF+PLDPSWPK+RILSI+SS
Sbjct: 122 PIAEQSEEIKNKEIPKILGIYMVPSVEYIIAVLSVLRCGEAFMPLDPSWPKERILSIVSS 181

Query: 503 SKVALIVKSKSCFTATEDFQLEESDWLAEQSSCTVLEMSMNENHEKVFGCSELDWPCQSM 682
           S V LI+  +S F  +  F+L++S WL + +SC VL MSM +  +     SEL WPC+  
Sbjct: 182 SNVDLIIGCRSSFDTSSHFKLDKSHWLVDCNSCPVLSMSMEDKLQNHSDPSELVWPCEKE 241

Query: 683 RKRKFCYLMYTSGSTGKPKGVCGTE 757
             R FCYLMYTSGSTGKPKG+CGTE
Sbjct: 242 ELRLFCYLMYTSGSTGKPKGICGTE 266


>ref|XP_003627657.1| Acetyl-coenzyme A synthetase [Medicago truncatula]
           gi|355521679|gb|AET02133.1| Acetyl-coenzyme A synthetase
           [Medicago truncatula]
          Length = 1224

 Score =  218 bits (554), Expect = 1e-54
 Identities = 121/270 (44%), Positives = 165/270 (61%), Gaps = 28/270 (10%)
 Frame = +2

Query: 32  ENNLCCISHLFYKTASLNPNNISVIHASAGAQICRQFRHLDNILLDYNSYRE----SHSN 199
           E   CCISH F++TA+ NPN I+VIHAS  A + RQ     N   D+ +  +    S S 
Sbjct: 4   ETPYCCISHEFFQTATANPNKIAVIHASGVANLSRQNSTSPNFNQDFTTLLQQRVDSTSP 63

Query: 200 PYLKGDEFFTYSDVLSSVQSLSYRIRHVIDNPDDPLIRPPQ----DCIVNDEG-VEETGG 364
           P+  GD  FTYS +L S++SLS R+  ++    DP +   +    D +  +EG V+++  
Sbjct: 64  PFYHGDRSFTYSQLLDSIRSLSSRLSSILHGAHDPHLITAKSQGNDGVHREEGTVQKSES 123

Query: 365 LR-------------------IIGIYMVPSVEYIVALLSVLRCGEAFLPLDPSWPKQRIL 487
           L+                   I+GIYM PSVEYI+A+LSVLRCGEAFLPLDP WP +RIL
Sbjct: 124 LKNVKPRAESNVNSIEEYKPKIVGIYMPPSVEYIIAVLSVLRCGEAFLPLDPFWPNERIL 183

Query: 488 SIISSSKVALIVKSKSCFTATEDFQLEESDWLAEQSSCTVLEMSMNENHEKVFGCSELDW 667
           S+ SSS V LI+ S+S F+ +   +L+ES WL +  SC +L  S+ EN ++    ++   
Sbjct: 184 SVASSSNVDLIIGSQSSFSKSNLDRLDESHWLVKLISCPILRYSIEENLQECSSSTDFAC 243

Query: 668 PCQSMRKRKFCYLMYTSGSTGKPKGVCGTE 757
            C + +KR FCYLMYTSGS+GKPKGVCGTE
Sbjct: 244 HCSNEKKRSFCYLMYTSGSSGKPKGVCGTE 273


>dbj|BAA97455.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1175

 Score =  200 bits (508), Expect = 3e-49
 Identities = 110/251 (43%), Positives = 151/251 (60%), Gaps = 1/251 (0%)
 Frame = +2

Query: 8   MANEKSGEENNLCCISHLFYKTASLNPNNISVIHASAGAQICRQFRHLDNILLDYNSYR- 184
           M+    G+  N CCISH F   AS NP+ I+VI AS                L   S R 
Sbjct: 1   MSERNRGKPKN-CCISHKFVDAASKNPHQIAVIQASG---------------LTARSIRS 44

Query: 185 ESHSNPYLKGDEFFTYSDVLSSVQSLSYRIRHVIDNPDDPLIRPPQDCIVNDEGVEETGG 364
           ES + P   GD+ FT++++ SS+ SL+ R+  ++ N D  +            G +    
Sbjct: 45  ESAAPPVYDGDKCFTFAELSSSIDSLTSRLHRILSNDDSQVA-----------GSDVVYM 93

Query: 365 LRIIGIYMVPSVEYIVALLSVLRCGEAFLPLDPSWPKQRILSIISSSKVALIVKSKSCFT 544
            +++ +YM PSVEY++++ SVLRCGEAFLPLDPSWP++R+LS+ISSS ++L++   +C  
Sbjct: 94  PKVVALYMPPSVEYVISVFSVLRCGEAFLPLDPSWPRERVLSLISSSNISLVI---ACGL 150

Query: 545 ATEDFQLEESDWLAEQSSCTVLEMSMNENHEKVFGCSELDWPCQSMRKRKFCYLMYTSGS 724
           ++      ES WL E++ C VL  SM+E      GCS   WPC+  R+RKFCYLMYTSGS
Sbjct: 151 SSV-----ESHWLVERNVCPVLLFSMDEKLSVETGCSSFVWPCKKERQRKFCYLMYTSGS 205

Query: 725 TGKPKGVCGTE 757
           TGKPKGVCGTE
Sbjct: 206 TGKPKGVCGTE 216


>ref|XP_002870455.1| hypothetical protein ARALYDRAFT_330218 [Arabidopsis lyrata subsp.
           lyrata] gi|297316291|gb|EFH46714.1| hypothetical protein
           ARALYDRAFT_330218 [Arabidopsis lyrata subsp. lyrata]
          Length = 1120

 Score =  194 bits (492), Expect = 2e-47
 Identities = 108/250 (43%), Positives = 145/250 (58%)
 Frame = +2

Query: 8   MANEKSGEENNLCCISHLFYKTASLNPNNISVIHASAGAQICRQFRHLDNILLDYNSYRE 187
           M+    G+  N CCISH F   AS NP+ I+VI AS      R+ R             E
Sbjct: 1   MSERNRGKSEN-CCISHKFV-AASKNPHQIAVIQASG--LTARRIRS------------E 44

Query: 188 SHSNPYLKGDEFFTYSDVLSSVQSLSYRIRHVIDNPDDPLIRPPQDCIVNDEGVEETGGL 367
           S       GD+ FT++++ SS+ SL+ R+R ++ + D             + G +     
Sbjct: 45  SAEPSVYDGDKCFTFAELSSSIDSLTSRLRRILSDDDS-----------QEAGSDVVYMP 93

Query: 368 RIIGIYMVPSVEYIVALLSVLRCGEAFLPLDPSWPKQRILSIISSSKVALIVKSKSCFTA 547
           +++ +YM PSVEYI+++ SVLRCGEAFLPLDP+WP++R+LS+ISSS  +L++        
Sbjct: 94  KVVALYMPPSVEYIISVFSVLRCGEAFLPLDPTWPRERVLSLISSSNASLVIA------- 146

Query: 548 TEDFQLEESDWLAEQSSCTVLEMSMNENHEKVFGCSELDWPCQSMRKRKFCYLMYTSGST 727
                LE S WL E   C VL  SM+E   +  GCS   WPC+  R+RKFCYLMYTSGST
Sbjct: 147 -----LERSHWLVETKVCPVLLFSMDEKLSEETGCSSFVWPCKKQRQRKFCYLMYTSGST 201

Query: 728 GKPKGVCGTE 757
           GKPKGVCGTE
Sbjct: 202 GKPKGVCGTE 211


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