BLASTX nr result

ID: Coptis23_contig00008535 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008535
         (1463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17555.3| unnamed protein product [Vitis vinifera]              385   e-104
ref|XP_002268445.1| PREDICTED: scarecrow-like protein 15 [Vitis ...   385   e-104
ref|XP_003629479.1| GRAS family transcription factor [Medicago t...   350   5e-94
gb|ABU45178.1| unknown [Solanum melongena]                            346   8e-93
gb|AAG01129.1|AF273333_14 BAC19.14 [Solanum lycopersicum]             344   4e-92

>emb|CBI17555.3| unnamed protein product [Vitis vinifera]
          Length = 576

 Score =  385 bits (990), Expect = e-104
 Identities = 203/389 (52%), Positives = 271/389 (69%), Gaps = 1/389 (0%)
 Frame = -1

Query: 1418 LDQLIRAATFVESNDLHSAQVILSRLNQHLHCPFGKPLQRACFYFKEALQIFLTXXXXXX 1239
            +++LIRAA    SN+   AQ IL+RLNQ L  P GKPLQRA FYFKEAL   LT      
Sbjct: 207  VEELIRAAECFGSNNSQLAQAILARLNQRLRAPVGKPLQRAAFYFKEALHSLLTGSNRKS 266

Query: 1238 XXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSPLQVVQKIKSYKSFSEISPITMFASFTAN 1059
                                          S  ++VQ IK+YK+FS ISPI MF++FTA+
Sbjct: 267  HS----------------------------SASEIVQTIKAYKAFSMISPIAMFSNFTAS 298

Query: 1058 QALLEALDGTLYIHVVDFEIGIGGQWASFMQEIANKAKSRNVLASSLRITAVVPEESSME 879
            QALLEA+DG+L+IH++DF+IG+GGQ+ASFM+EIA+++++  V    LRITAVVPEE ++E
Sbjct: 299  QALLEAVDGSLFIHIIDFDIGLGGQYASFMKEIADRSEACKVNPPVLRITAVVPEEYAVE 358

Query: 878  AGLIRENLQQFAQELGIQFQLEFIMFNSFDDLMFNSIRFVNGESIAVNLSPAIFRCLKTS 699
            + LI+ENL QFAQEL I+F++EF++  +F+ L F +++F++GE  AVN+SPAIFR L T+
Sbjct: 359  SRLIKENLFQFAQELKIEFRIEFVLIPTFEVLSFKAVKFIDGEKTAVNISPAIFRRLGTT 418

Query: 698  ESIAGFLRFLRRISPRITVFIDGEGCRESRGTSFRKNFINGLEFYSTLFEALDAANNG-D 522
             +IAGF   LRRISP++ VF+DGEG  +S  TSF +NFINGLEFY+ + E+LDA   G  
Sbjct: 419  NNIAGFFCDLRRISPQVVVFVDGEGWTDSGATSFNRNFINGLEFYTAMLESLDAGGAGAG 478

Query: 521  VELVRRIERFLLKPKIFANVSSAGNCILPWRDLFSSVGMIPVQFSEFTDSQAEWLVRRAQ 342
             + VR+IE  L++PKIFA V   G  +  WR+LFS  G+  VQ+S+F +SQAE L+ ++Q
Sbjct: 479  GDWVRKIEMSLIQPKIFAAVGDVGRRVTAWRELFSGAGLGQVQWSQFAESQAECLLGKSQ 538

Query: 341  VRGFHVEKRHGSMLLCWHERELVSTSAWR 255
            VRGFHV KR   MLLCWH + LV+TSAWR
Sbjct: 539  VRGFHVAKRQAEMLLCWHGKPLVATSAWR 567


>ref|XP_002268445.1| PREDICTED: scarecrow-like protein 15 [Vitis vinifera]
          Length = 538

 Score =  385 bits (990), Expect = e-104
 Identities = 203/389 (52%), Positives = 271/389 (69%), Gaps = 1/389 (0%)
 Frame = -1

Query: 1418 LDQLIRAATFVESNDLHSAQVILSRLNQHLHCPFGKPLQRACFYFKEALQIFLTXXXXXX 1239
            +++LIRAA    SN+   AQ IL+RLNQ L  P GKPLQRA FYFKEAL   LT      
Sbjct: 176  VEELIRAAECFGSNNSQLAQAILARLNQRLRAPVGKPLQRAAFYFKEALHSLLTGSNRKS 235

Query: 1238 XXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSPLQVVQKIKSYKSFSEISPITMFASFTAN 1059
                                          S  ++VQ IK+YK+FS ISPI MF++FTA+
Sbjct: 236  HS----------------------------SASEIVQTIKAYKAFSMISPIAMFSNFTAS 267

Query: 1058 QALLEALDGTLYIHVVDFEIGIGGQWASFMQEIANKAKSRNVLASSLRITAVVPEESSME 879
            QALLEA+DG+L+IH++DF+IG+GGQ+ASFM+EIA+++++  V    LRITAVVPEE ++E
Sbjct: 268  QALLEAVDGSLFIHIIDFDIGLGGQYASFMKEIADRSEACKVNPPVLRITAVVPEEYAVE 327

Query: 878  AGLIRENLQQFAQELGIQFQLEFIMFNSFDDLMFNSIRFVNGESIAVNLSPAIFRCLKTS 699
            + LI+ENL QFAQEL I+F++EF++  +F+ L F +++F++GE  AVN+SPAIFR L T+
Sbjct: 328  SRLIKENLFQFAQELKIEFRIEFVLIPTFEVLSFKAVKFIDGEKTAVNISPAIFRRLGTT 387

Query: 698  ESIAGFLRFLRRISPRITVFIDGEGCRESRGTSFRKNFINGLEFYSTLFEALDAANNG-D 522
             +IAGF   LRRISP++ VF+DGEG  +S  TSF +NFINGLEFY+ + E+LDA   G  
Sbjct: 388  NNIAGFFCDLRRISPQVVVFVDGEGWTDSGATSFNRNFINGLEFYTAMLESLDAGGAGAG 447

Query: 521  VELVRRIERFLLKPKIFANVSSAGNCILPWRDLFSSVGMIPVQFSEFTDSQAEWLVRRAQ 342
             + VR+IE  L++PKIFA V   G  +  WR+LFS  G+  VQ+S+F +SQAE L+ ++Q
Sbjct: 448  GDWVRKIEMSLIQPKIFAAVGDVGRRVTAWRELFSGAGLGQVQWSQFAESQAECLLGKSQ 507

Query: 341  VRGFHVEKRHGSMLLCWHERELVSTSAWR 255
            VRGFHV KR   MLLCWH + LV+TSAWR
Sbjct: 508  VRGFHVAKRQAEMLLCWHGKPLVATSAWR 536


>ref|XP_003629479.1| GRAS family transcription factor [Medicago truncatula]
            gi|355523501|gb|AET03955.1| GRAS family transcription
            factor [Medicago truncatula]
          Length = 542

 Score =  350 bits (898), Expect = 5e-94
 Identities = 195/392 (49%), Positives = 254/392 (64%), Gaps = 3/392 (0%)
 Frame = -1

Query: 1418 LDQLIRAATFVESNDLHSAQVILSRLNQHLHCPFGKPLQRACFYFKEALQIFLTXXXXXX 1239
            +++LIRAA   ++N L  AQ IL RLNQ L  P GKPL RA F+FK+ALQ  L+      
Sbjct: 180  IEELIRAADCFDNNHLQLAQAILERLNQRLRSPTGKPLHRAAFHFKDALQSLLSGSNRTN 239

Query: 1238 XXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSPLQVVQKIKSYKSFSEISPITMFASFTAN 1059
                                          S +++VQ I+++K+FS ISPI MF+ FT N
Sbjct: 240  PPRLS-------------------------SMVEIVQTIRTFKAFSGISPIPMFSIFTTN 274

Query: 1058 QALLEALDGTLYIHVVDFEIGIGGQWASFMQEIANKAKSRNVLASSLRITAVVPEESSME 879
            QALLEAL G+LY+HVVDFEIG+G Q+AS M+EIA KA + + L   LRITAVVPEE ++E
Sbjct: 275  QALLEALHGSLYMHVVDFEIGLGIQYASLMKEIAEKAVNGSPL---LRITAVVPEEYAVE 331

Query: 878  AGLIRENLQQFAQELGIQFQLEFIMFNSFDDLMFNSIRFVNGESIAVNLSPAIFRCLKTS 699
            + LIRENL QFA +LGI+ Q++F+   +F+ + F ++RFV+GE  A+ L+PAIF C   S
Sbjct: 332  SRLIRENLNQFAHDLGIRVQVDFVPLRTFETVSFKAVRFVDGEKTAILLTPAIF-CRLGS 390

Query: 698  ESIAGFLRFLRRISPRITVFIDGEGCRESRGT-SFRKNFINGLEFYSTLFEALDA--ANN 528
            E  A FL  +RRI+P + VF+DGEG  E+    SFR+  +N LEFYS + E+LDA  A  
Sbjct: 391  EGTAAFLSDVRRITPGVVVFVDGEGWTEAAAAASFRRGVVNSLEFYSMMLESLDASVAAG 450

Query: 527  GDVELVRRIERFLLKPKIFANVSSAGNCILPWRDLFSSVGMIPVQFSEFTDSQAEWLVRR 348
            G  E  RRIE  LL+PKI A V +AG    PWR+ F   GM PVQ S+F D QAE L+ +
Sbjct: 451  GGGEWARRIEMLLLRPKIIAAVEAAGRRTTPWREAFYGAGMRPVQLSQFADFQAECLLAK 510

Query: 347  AQVRGFHVEKRHGSMLLCWHERELVSTSAWRC 252
             Q+RGFHV KR   ++L WHER +V+TSAWRC
Sbjct: 511  VQIRGFHVAKRQAELVLFWHERAMVATSAWRC 542


>gb|ABU45178.1| unknown [Solanum melongena]
          Length = 547

 Score =  346 bits (888), Expect = 8e-93
 Identities = 199/404 (49%), Positives = 254/404 (62%), Gaps = 4/404 (0%)
 Frame = -1

Query: 1451 QNLELEFDCSQLDQLIRAATFVESNDLHSAQVILSRLNQHLHCPFGKPLQRACFYFKEAL 1272
            QN  + FD   +D+LIR A   E+N    A VIL+RLNQ L    GKPLQRA FYFKEAL
Sbjct: 178  QNWNVGFD--YVDELIRFAECFETNAFQVAHVILARLNQRLRSAAGKPLQRAAFYFKEAL 235

Query: 1271 QIFLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSPLQVVQKIKSYKSFSEIS 1092
            Q  L                                     S   V+Q IKSYK FS IS
Sbjct: 236  QAQLAGSTRQTRPS---------------------------SSSDVIQTIKSYKIFSNIS 268

Query: 1091 PITMFASFTANQALLEALDGTLYIHVVDFEIGIGGQWASFMQEIANKAKSRNVLASSLRI 912
            PI MF+SFTANQA+LEA+DG++ +HV+DF+IG+GG WASFM+E+A+KA+ R   A  LRI
Sbjct: 269  PIPMFSSFTANQAVLEAVDGSMLVHVIDFDIGLGGHWASFMKELADKAECRKANAPVLRI 328

Query: 911  TAVVPEESSMEAGLIRENLQQFAQELGIQFQLEFIMFNSFDDLMFNSIRFVNGESIAVNL 732
            TA+VPEE ++E+ LIRENL QFA+EL I F+++F++  +F+ L F +I+F+ GE  AV L
Sbjct: 329  TALVPEEYAVESRLIRENLTQFARELNIGFEIDFVLIRTFELLSFKAIKFMEGEKTAVLL 388

Query: 731  SPAIFRCLKTSESIAGFLRFLRRISPRITVFIDGEGCRESRGTSFRKNFINGLEFYSTLF 552
            SPAIFR +      +GF+  LRRISP + V +D EG       SFR+  I+GLEFYSTL 
Sbjct: 389  SPAIFRRVG-----SGFVNDLRRISPNVVVHVDSEGLMGYGAMSFRQTVIDGLEFYSTLL 443

Query: 551  EALDAANNGD---VELVRRIERFLLKPKIFANVSSAG-NCILPWRDLFSSVGMIPVQFSE 384
            E+L+AAN G     + +R+IE F+L PKI   V + G      W+D   + G  PV  S+
Sbjct: 444  ESLEAANIGGGNCGDWMRKIENFVLFPKIVDMVGAVGRRGGGSWKDAMVAAGFRPVGLSQ 503

Query: 383  FTDSQAEWLVRRAQVRGFHVEKRHGSMLLCWHERELVSTSAWRC 252
            F D QA+ L+ R QVRGFHV KR   MLLCWH+R LV+TSAWRC
Sbjct: 504  FADFQADCLLGRVQVRGFHVAKRQAEMLLCWHDRALVATSAWRC 547


>gb|AAG01129.1|AF273333_14 BAC19.14 [Solanum lycopersicum]
          Length = 536

 Score =  344 bits (882), Expect = 4e-92
 Identities = 198/405 (48%), Positives = 252/405 (62%), Gaps = 5/405 (1%)
 Frame = -1

Query: 1451 QNLELEFDCSQLDQLIRAATFVESNDLHSAQVILSRLNQHLHCPFGKPLQRACFYFKEAL 1272
            QN  + FD   +D+LIR A   E+N    A VIL+RLNQ L    GKPLQRA FYFKEAL
Sbjct: 166  QNWSVGFD--YVDELIRFAECFETNAFQLAHVILARLNQRLRSAAGKPLQRAAFYFKEAL 223

Query: 1271 QIFLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLSPLQVVQKIKSYKSFSEIS 1092
            Q  L                                     S   V+Q IKSYK  S IS
Sbjct: 224  QAQLAGSARQTRSS---------------------------SSSDVIQTIKSYKILSNIS 256

Query: 1091 PITMFASFTANQALLEALDGTLYIHVVDFEIGIGGQWASFMQEIANKAKSRNVLASSLRI 912
            PI MF+SFTANQA+LEA+DG++ +HV+DF+IG+GG WASFM+E+A+KA+ R   A  LRI
Sbjct: 257  PIPMFSSFTANQAVLEAVDGSMLVHVIDFDIGLGGHWASFMKELADKAECRKANAPILRI 316

Query: 911  TAVVPEESSMEAGLIRENLQQFAQELGIQFQLEFIMFNSFDDLMFNSIRFVNGESIAVNL 732
            TA+VPEE ++E+ LIRENL QFA+EL I F+++F++  +F+ L F +I+F+ GE  AV L
Sbjct: 317  TALVPEEYAVESRLIRENLTQFARELNIGFEIDFVLIRTFELLSFKAIKFMEGEKTAVLL 376

Query: 731  SPAIFRCLKTSESIAGFLRFLRRISPRITVFIDGEGCRESRGTSFRKNFINGLEFYSTLF 552
            SPAIFR +      +GF+  LRRISP + V +D EG       SFR+  I+GLEFYSTL 
Sbjct: 377  SPAIFRRVG-----SGFVNELRRISPNVVVHVDSEGLMGYGAMSFRQTVIDGLEFYSTLL 431

Query: 551  EALDAANNGD---VELVRRIERFLLKPKIFANVSSAG--NCILPWRDLFSSVGMIPVQFS 387
            E+L+AAN G     + +R+IE F+L PKI   + + G       WRD     G  PV  S
Sbjct: 432  ESLEAANIGGGNCGDWMRKIENFVLFPKIVDMIGAVGRRGGGGSWRDAMVDAGFRPVGLS 491

Query: 386  EFTDSQAEWLVRRAQVRGFHVEKRHGSMLLCWHERELVSTSAWRC 252
            +F D QA+ L+ R QVRGFHV KR   MLLCWH+R LV+TSAWRC
Sbjct: 492  QFADFQADCLLGRVQVRGFHVAKRQAEMLLCWHDRALVATSAWRC 536


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