BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008530
         (1093 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002439942.1| hypothetical protein SORBIDRAFT_09g023070 [S...   174   3e-41
gb|AFW82289.1| putative RING zinc finger domain superfamily prot...   171   4e-40
gb|AFW78330.1| putative RING/U-box superfamily protein [Zea mays]     171   4e-40
ref|NP_001147524.1| zinc finger, C3HC4 type family protein [Zea ...   171   4e-40
ref|NP_001055809.1| Os05g0470700 [Oryza sativa Japonica Group] g...   170   5e-40

>ref|XP_002439942.1| hypothetical protein SORBIDRAFT_09g023070 [Sorghum bicolor]
           gi|241945227|gb|EES18372.1| hypothetical protein
           SORBIDRAFT_09g023070 [Sorghum bicolor]
          Length = 551

 Score =  174 bits (442), Expect = 3e-41
 Identities = 85/158 (53%), Positives = 102/158 (64%), Gaps = 9/158 (5%)
 Frame = +1

Query: 382 EGVAVEDLGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHRE 561
           +G  V     DG E G   A F+CN+C ++A+EPVVTSCGHLFCWPCLYQWLH+H  H+E
Sbjct: 210 DGAVVGVSEDDGTEHGKSAAMFECNICFEMAEEPVVTSCGHLFCWPCLYQWLHVHSSHKE 269

Query: 562 CPVCKGEVTEADITPIYGRGNS----EKESGREGKEVDSSLKIPPRPRGRRSEGLRQRIS 729
           CPVCKGEVTE +ITPIYGRGNS    EK+   +G    S  KIPPRP G R E  RQ+  
Sbjct: 270 CPVCKGEVTEGNITPIYGRGNSGSDTEKKVAEDGNA--SGPKIPPRPHGNRLESFRQQFH 327

Query: 730 --RPLLRRPRED---LGSWRFVVDDELINQPDELEEPP 828
             RP+ RR  +    L +WR + D  L+N    LE PP
Sbjct: 328 HLRPISRRFGDTHGLLSTWRRIFDQHLVNSMSRLEAPP 365


>gb|AFW82289.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 550

 Score =  171 bits (432), Expect = 4e-40
 Identities = 85/165 (51%), Positives = 101/165 (61%), Gaps = 6/165 (3%)
 Frame = +1

Query: 370 KDGGEGVAVEDLGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHC 549
           K   EG  V     DG E G   A F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H 
Sbjct: 206 KVAAEGAVVGVSEDDGTEHGKSTAMFECNICFEMADEPVVTSCGHLFCWPCLYQWLHVHS 265

Query: 550 DHRECPVCKGEVTEADITPIYGRGNSEKESGREGKEVDSS-LKIPPRPRGRRSEGLRQRI 726
            H+ECPVCKGEVTE +ITPIYGRGNS     +  ++ ++S  KIPPRP G R E  RQ+ 
Sbjct: 266 SHKECPVCKGEVTEGNITPIYGRGNSGSAMEKVAEDGNASGPKIPPRPHGNRLESFRQQF 325

Query: 727 S--RPLLRRPRED---LGSWRFVVDDELINQPDELEEPPMLGTFE 846
              RP+ RR  E    L +WR + D  L N     E  P L   E
Sbjct: 326 HHLRPISRRLGEAHGFLSTWRRIFDQHLANSMSRFEGTPELSVSE 370


>gb|AFW78330.1| putative RING/U-box superfamily protein [Zea mays]
          Length = 550

 Score =  171 bits (432), Expect = 4e-40
 Identities = 85/157 (54%), Positives = 99/157 (63%), Gaps = 9/157 (5%)
 Frame = +1

Query: 385 GVAVEDLGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHREC 564
           G  V     DG E G     F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H  H+EC
Sbjct: 211 GAVVGVSEDDGTEHGKSAPMFECNICFEMADEPVVTSCGHLFCWPCLYQWLHVHSSHKEC 270

Query: 565 PVCKGEVTEADITPIYGRGNS----EKESGREGKEVDSSLKIPPRPRGRRSEGLRQRIS- 729
           PVCKGEVTE +ITPIYGRGNS    EK+   +GK   S  KIPPRP G R E  RQ+   
Sbjct: 271 PVCKGEVTEGNITPIYGRGNSGSEMEKKVAEDGKA--SGPKIPPRPHGNRLESFRQQFHH 328

Query: 730 -RPLLRRPRED---LGSWRFVVDDELINQPDELEEPP 828
            RP+ RR  E    L +WR ++D  L N     E PP
Sbjct: 329 LRPISRRLGEAHGFLSTWRRILDRHLANSMSRFEGPP 365


>ref|NP_001147524.1| zinc finger, C3HC4 type family protein [Zea mays]
           gi|195611986|gb|ACG27823.1| zinc finger, C3HC4 type
           family protein [Zea mays]
          Length = 550

 Score =  171 bits (432), Expect = 4e-40
 Identities = 85/157 (54%), Positives = 99/157 (63%), Gaps = 9/157 (5%)
 Frame = +1

Query: 385 GVAVEDLGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHREC 564
           G  V     DG E G     F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H  H+EC
Sbjct: 211 GAVVGVSEDDGTEHGKSAPMFECNICFEMADEPVVTSCGHLFCWPCLYQWLHVHSSHKEC 270

Query: 565 PVCKGEVTEADITPIYGRGNS----EKESGREGKEVDSSLKIPPRPRGRRSEGLRQRIS- 729
           PVCKGEVTE +ITPIYGRGNS    EK+   +GK   S  KIPPRP G R E  RQ+   
Sbjct: 271 PVCKGEVTEGNITPIYGRGNSGSEMEKKVAEDGKA--SGPKIPPRPHGNRLESFRQQFHH 328

Query: 730 -RPLLRRPRED---LGSWRFVVDDELINQPDELEEPP 828
            RP+ RR  E    L +WR ++D  L N     E PP
Sbjct: 329 LRPISRRLGEAHGFLSTWRRILDRHLANSMSRFEGPP 365


>ref|NP_001055809.1| Os05g0470700 [Oryza sativa Japonica Group]
           gi|113579360|dbj|BAF17723.1| Os05g0470700 [Oryza sativa
           Japonica Group] gi|215769483|dbj|BAH01712.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|222631919|gb|EEE64051.1| hypothetical protein
           OsJ_18880 [Oryza sativa Japonica Group]
          Length = 562

 Score =  170 bits (431), Expect = 5e-40
 Identities = 83/158 (52%), Positives = 103/158 (65%), Gaps = 9/158 (5%)
 Frame = +1

Query: 382 EGVAVEDLGQDGKEQGNGMANFDCNVCLDVAKEPVVTSCGHLFCWPCLYQWLHIHCDHRE 561
           +G  V    ++  E+G  +A F+CN+C ++A EPVVTSCGHLFCWPCLYQWLH+H  H+E
Sbjct: 215 DGAIVGASEEEPAERGKSVAMFECNICFEMASEPVVTSCGHLFCWPCLYQWLHVHSTHKE 274

Query: 562 CPVCKGEVTEADITPIYGRGNS----EKESGREGKEVDSSLKIPPRPRGRRSEGLRQRIS 729
           CPVCKGEVTE +ITPIYGRGNS    EK+   EG    S   IPPRP G R E  RQ+  
Sbjct: 275 CPVCKGEVTEGNITPIYGRGNSTSDAEKKVAEEGNV--SGPTIPPRPHGNRLESFRQKFH 332

Query: 730 --RPLLRRPRED---LGSWRFVVDDELINQPDELEEPP 828
             RP+ RR  E    L SWR ++D +++N     E PP
Sbjct: 333 HLRPISRRLGEAHGILSSWRRILDQQIMNSVSRFEGPP 370