BLASTX nr result

ID: Coptis23_contig00008527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008527
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631460.1| PREDICTED: uncharacterized protein LOC100853...   162   5e-38
emb|CBI23379.3| unnamed protein product [Vitis vinifera]              162   5e-38
ref|XP_002329554.1| predicted protein [Populus trichocarpa] gi|2...   161   1e-37
emb|CBI25868.3| unnamed protein product [Vitis vinifera]              159   5e-37
ref|XP_003635426.1| PREDICTED: uncharacterized protein LOC100854...   158   7e-37

>ref|XP_003631460.1| PREDICTED: uncharacterized protein LOC100853434 [Vitis vinifera]
          Length = 345

 Score =  162 bits (410), Expect = 5e-38
 Identities = 80/111 (72%), Positives = 87/111 (78%)
 Frame = -1

Query: 629 GTLEAEGATFSKSPTEGCPTITRGSVAWVDSGPEFFISLANHNEWKKDYTVFGVVLPEDM 450
           GTLEA G TF K PTE CPTI RGSVAWV SGPEFFISLANH EWKK YTVFG VLPEDM
Sbjct: 235 GTLEALGTTFKKIPTEDCPTIRRGSVAWVGSGPEFFISLANHQEWKKVYTVFGSVLPEDM 294

Query: 449 EIAEKIAKLPTTPDVWNNINVSILEKPVPLWFQRIKNINVNLNHKTNSNSD 297
           EIAEKIA+LPT  DVWN INVS+LE P+PL  +R+K    +LN  TN  S+
Sbjct: 295 EIAEKIAQLPTKLDVWNKINVSVLENPIPLRLRRMKKSEGDLNVATNVESE 345


>emb|CBI23379.3| unnamed protein product [Vitis vinifera]
          Length = 245

 Score =  162 bits (410), Expect = 5e-38
 Identities = 80/111 (72%), Positives = 87/111 (78%)
 Frame = -1

Query: 629 GTLEAEGATFSKSPTEGCPTITRGSVAWVDSGPEFFISLANHNEWKKDYTVFGVVLPEDM 450
           GTLEA G TF K PTE CPTI RGSVAWV SGPEFFISLANH EWKK YTVFG VLPEDM
Sbjct: 135 GTLEALGTTFKKIPTEDCPTIRRGSVAWVGSGPEFFISLANHQEWKKVYTVFGSVLPEDM 194

Query: 449 EIAEKIAKLPTTPDVWNNINVSILEKPVPLWFQRIKNINVNLNHKTNSNSD 297
           EIAEKIA+LPT  DVWN INVS+LE P+PL  +R+K    +LN  TN  S+
Sbjct: 195 EIAEKIAQLPTKLDVWNKINVSVLENPIPLRLRRMKKSEGDLNVATNVESE 245


>ref|XP_002329554.1| predicted protein [Populus trichocarpa] gi|222870263|gb|EEF07394.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  161 bits (407), Expect = 1e-37
 Identities = 78/103 (75%), Positives = 85/103 (82%)
 Frame = -1

Query: 629 GTLEAEGATFSKSPTEGCPTITRGSVAWVDSGPEFFISLANHNEWKKDYTVFGVVLPEDM 450
           GTLEA+G +F K PTE CP I RGSVAWV SGPEFFISLANH EWKK YTVFG VLPEDM
Sbjct: 231 GTLEAQGTSFKKIPTEECPYIRRGSVAWVGSGPEFFISLANHQEWKKAYTVFGSVLPEDM 290

Query: 449 EIAEKIAKLPTTPDVWNNINVSILEKPVPLWFQRIKNINVNLN 321
           EIAEKIA+LPT  DVWNNINVS+LEKP+PL  +R+K    NLN
Sbjct: 291 EIAEKIAQLPTKSDVWNNINVSVLEKPLPLLVRRLKARQGNLN 333


>emb|CBI25868.3| unnamed protein product [Vitis vinifera]
          Length = 1195

 Score =  159 bits (401), Expect = 5e-37
 Identities = 81/118 (68%), Positives = 88/118 (74%), Gaps = 4/118 (3%)
 Frame = -1

Query: 629 GTLEAEGATFSKSPTEGCPTITRGSVAWVDSGPEFFISLANHNEWKKDYTVFGVVLPEDM 450
           GTLEA G TF K PTE CPT+ RGSVAWV SGPEFFISLANH EWKK YTVFG VLPEDM
Sbjct: 135 GTLEALGTTFKKIPTEDCPTLGRGSVAWVGSGPEFFISLANHQEWKKVYTVFGSVLPEDM 194

Query: 449 EIAEKIAKLPTTPDVWNNINVSILEKPVPLWFQRIKNINVNLNHK----TNSNSDSNG 288
           EIAEKIA+LPT  DVWN INVS+LE P+PL  +R+K    +LN      T    DSNG
Sbjct: 195 EIAEKIAQLPTKLDVWNKINVSVLENPIPLRLRRMKKSEGDLNFHEHIITELLEDSNG 252


>ref|XP_003635426.1| PREDICTED: uncharacterized protein LOC100854739 [Vitis vinifera]
          Length = 345

 Score =  158 bits (400), Expect = 7e-37
 Identities = 78/111 (70%), Positives = 86/111 (77%)
 Frame = -1

Query: 629 GTLEAEGATFSKSPTEGCPTITRGSVAWVDSGPEFFISLANHNEWKKDYTVFGVVLPEDM 450
           GTLEA G TF K PTE CPT+ RGSVAWV SGPEFFISLANH EWKK YTVFG VLPEDM
Sbjct: 235 GTLEALGTTFKKIPTEDCPTLGRGSVAWVGSGPEFFISLANHQEWKKVYTVFGSVLPEDM 294

Query: 449 EIAEKIAKLPTTPDVWNNINVSILEKPVPLWFQRIKNINVNLNHKTNSNSD 297
           EIAEKIA+LPT  DVWN INVS+LE P+PL  +R+K    +LN  T   S+
Sbjct: 295 EIAEKIAQLPTKLDVWNKINVSVLENPIPLRLRRMKKSEGDLNVVTKVESE 345


Top