BLASTX nr result

ID: Coptis23_contig00008523 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008523
         (1554 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]   323   8e-86
ref|XP_002310707.1| predicted protein [Populus trichocarpa] gi|2...   283   1e-73
ref|XP_002518141.1| conserved hypothetical protein [Ricinus comm...   281   4e-73
ref|XP_002278393.1| PREDICTED: UPF0481 protein At3g47200-like [V...   278   4e-72
ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|2...   278   4e-72

>emb|CAN68458.1| hypothetical protein VITISV_031449 [Vitis vinifera]
          Length = 439

 Score =  323 bits (828), Expect = 8e-86
 Identities = 198/455 (43%), Positives = 270/455 (59%), Gaps = 12/455 (2%)
 Frame = +1

Query: 82   KRMAENGADMNEQNGRDHVLIQISELNKVLAASIKIKLDKVSPSPSGKSCCIYKVHEKFR 261
            + +A   ++  E NG           + +LAASI  KL  ++  PS   CCIY+V +  R
Sbjct: 4    ENIASEQSERREANGN---------ADSLLAASINEKLSSLTSLPS--QCCIYRVPDTLR 52

Query: 262  KVNEYAYTPEMVSIGPFHTAKLALQAMEDHKLRYMHVLLSRTTSLETKLAECVESIGKLE 441
            +VNE A+ P ++SIGP H  K  L+ ME HK +Y+  LL R     T +   V+++ +LE
Sbjct: 53   RVNEEAFVPRILSIGPVHHGKKRLRDMEGHKWQYLKALLQRKPG--TMVERYVKAMRELE 110

Query: 442  EKARKCYSEPTDHLDRDKFIEMMVVDGLFILELFGKSAGVAKYRNNDTIFNNIWGMPSVV 621
             + R CY+E     D D+F+ MM++DG FI+ELF K+        +D IFN    +  + 
Sbjct: 111  ARTRGCYAEIIK-FDSDEFVTMMLLDGCFIIELFLKNKNKQLRDEDDPIFNRTMVLTDLH 169

Query: 622  RDLILLENQLPMIVLDCLFEIVE---ESLGGHSLNELTLRFFN-----QLMPRDGNDALQ 777
            RDLILLENQLP  VL+ LF ++E   +     S+ ELT  FF      +++ RD    + 
Sbjct: 170  RDLILLENQLPFFVLETLFNLIENTDQEGPSTSVLELTYVFFKFLGLQEVLIRDSQPDV- 228

Query: 778  KYYNCHGKHLLDLFSKTFHPASLPQRETKKKVELKHIPCVTELRQAGVKFKKGSTTGSFV 957
                   KHLLDL    F P S  +  +K K EL  I  VTEL +AGVKF+ G T    +
Sbjct: 229  -------KHLLDLLRLWFVPPSSTKSTSKSKFEL--IRSVTELHEAGVKFRMG-TVSCLM 278

Query: 958  DIKFVDGVMEIPPILIQDQTDTLLRNLIASEQCYAGRST--YITSYAFFMDNLINSPNDV 1131
            +IKF++GV+EIPP+ I+D TD+LL NLIA EQC   R T  YIT Y   M+ LINSP DV
Sbjct: 279  EIKFINGVLEIPPLTIEDTTDSLLGNLIAFEQC-CNRFTPHYITDYVILMEYLINSPKDV 337

Query: 1132 RILRHYKIITNCLGDDEDVSILFNKLCSEVTLVN--YYYSDLCDLVNEYCEVTWHAWQAT 1305
             +L  Y II N LGD+E VS LF KL  EV   +  + +S+LC  VN+Y +  WH W+AT
Sbjct: 338  ALLSRYGIINNLLGDNEGVSHLFKKLGKEVVFNSDKFQFSNLCRDVNKYHKTRWHIWRAT 397

Query: 1306 LKRDYFHNPWAIISFVGAILIIFLTFTATLFGMLS 1410
            L+RDYF+NPWAIISF+GA+L++F T   T+  +LS
Sbjct: 398  LRRDYFNNPWAIISFIGAVLLLFFTLIQTVCSLLS 432


>ref|XP_002310707.1| predicted protein [Populus trichocarpa] gi|222853610|gb|EEE91157.1|
            predicted protein [Populus trichocarpa]
          Length = 533

 Score =  283 bits (723), Expect = 1e-73
 Identities = 174/469 (37%), Positives = 261/469 (55%), Gaps = 35/469 (7%)
 Frame = +1

Query: 112  NEQNGRDHVLIQISELNKVLAASIKIK-LDKVSPSPSGKSCCIYKVHEKFRKVNEYAYTP 288
            +E+N  DH   +  + + V++   K+K   +   + S     IY+V    R+ ++ AY P
Sbjct: 65   DEENHEDHEETRSPDFDWVISIKEKLKEAGQEDAAGSWSKLSIYRVPRYLREGDDKAYVP 124

Query: 289  EMVSIGPFHTAKLALQAMEDHKLRYMHVLLSRTTSLETKLAECVESIGKLEEKARKCYSE 468
            +++S+GP+H  K  L+ M+ HK R +H ++ RT   + KL   ++++ ++EEKAR CY  
Sbjct: 125  QIISLGPYHHGKKRLRQMDQHKWRCLHRVIKRTNQ-DIKLY--LDAVREIEEKARSCYEG 181

Query: 469  PTDHLDRDKFIEMMVVDGLFILELF-GKSAGVAK--YRNNDTIFNNIWGMPSVVRDLILL 639
            P + L  ++F+EMMV+DG F+LELF G + G  K  Y  ND +F     M S+ RD+I+L
Sbjct: 182  PIN-LSSNEFVEMMVLDGCFVLELFRGVAEGFKKLGYPRNDPVFAMRGSMHSIQRDMIML 240

Query: 640  ENQLPMIVLDCLFEIVEESLGGHSL-NELTLRFFNQLMPRDGN----------------D 768
            ENQLP+ VLD L  +   +     L  +LTL FF+ LMP D                   
Sbjct: 241  ENQLPLFVLDRLLGLQFNNSDQKGLVAQLTLIFFDPLMPTDEPLTKSDRNRLESSLGRAT 300

Query: 769  ALQKYYNCHGKHLLDLFSKTF---HPASLPQRETKKKVELKHIP---------CVTELRQ 912
                  +  G H LD+F ++     P  +P+   K++     +          CVTELR+
Sbjct: 301  TFDPLSDQGGLHCLDVFRRSLLRTGPKPVPRNWIKRRSNANRVADKRRQQLIHCVTELRE 360

Query: 913  AGVKFKKGSTTGSFVDIKFVDGVMEIPPILIQDQTDTLLRNLIASEQCYAGRSTYITSYA 1092
            AG+K +K  T   F D+KF  G++ +P +LI D T +L  NLIA EQC+      ITS+ 
Sbjct: 361  AGIKLRKRKTD-RFWDVKFKKGILRVPRLLIHDGTKSLFLNLIALEQCHIDCGNEITSFV 419

Query: 1093 FFMDNLINSPNDVRILRHYKIITNCLGDDEDVSILFNKLCSEVT--LVNYYYSDLCDLVN 1266
             FMDNLINSP DV  L +  II + LG D DV+ LFN+LC EV   + + Y S L + VN
Sbjct: 420  IFMDNLINSPEDVAYLHYCGIIEHWLGSDADVADLFNQLCQEVVFDINDSYLSRLSEDVN 479

Query: 1267 EYCEVTWHAWQATLKRDYFHNPWAIISFVGAILIIFLTFTATLFGMLSF 1413
             Y    W+ W+A+LK +YF NPWAI+S   A++++ LTF  T +G+ ++
Sbjct: 480  HYYNHKWNTWRASLKHNYFSNPWAIVSLFAAVVLLLLTFAQTFYGVYAY 528


>ref|XP_002518141.1| conserved hypothetical protein [Ricinus communis]
            gi|223542737|gb|EEF44274.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 422

 Score =  281 bits (718), Expect = 4e-73
 Identities = 173/424 (40%), Positives = 248/424 (58%), Gaps = 9/424 (2%)
 Frame = +1

Query: 169  LAASIKIKLDKVSPSPSGKSCCIYKVHEKFRKVNEYAYTPEMVSIGPFHTAKLALQAMED 348
            +A SI  KL  +SP  S +  CI+KV  + R VNE AY PE+++IGP+H  K  L+AME+
Sbjct: 9    VAISINEKLGSLSPLSSDR--CIFKVPNQVRVVNEKAYAPEIIAIGPYHRGKDHLKAMEE 66

Query: 349  HKLRYMHVLLSRTTSLETKLAECVESIGKLEEKARKCYSEPTDHLDRDKFIEMMVVDGLF 528
            HK+RY+   L R  S +  +   V++I  LEE AR CYSEP   L +D+F+EMMVVDG F
Sbjct: 67   HKIRYLQRFLRR--SHQNSVLGIVQAIRALEETARNCYSEPVS-LTQDEFVEMMVVDGCF 123

Query: 529  ILELFGKSAGVAKYRNNDTIFNNIWGMPSVVRDLILLENQLPMIVLDCLFEIVEESLGGH 708
            I+E   +    A     D IF        ++ DL+L+ENQLP  VL  LF ++      +
Sbjct: 124  IVEFSYRCVETAD--PEDPIFQTNQIQSRLMLDLLLVENQLPFFVLIKLFHMITGQ--EN 179

Query: 709  SLNELTLRFFNQLMPRDGNDALQKYYN---CHGKHLLDLFSKTFHPASLPQR-----ETK 864
            S+ +L L+ F  L+P  G +   +Y +      +HLL+L    + P  LP R       +
Sbjct: 180  SIIKLLLKVFKFLLPGRGYNPKHEYTSEQIGQIRHLLELIHDNWQP--LPTRMESYLNMR 237

Query: 865  KKVELKHIPCVTELRQAGVKFKKGSTTGSFVDIKFVDGVMEIPPILIQDQTDTLLRNLIA 1044
            + V+     C  EL++AG+KFKK      F DI F +GVM IP + I+D+T  ++RNLIA
Sbjct: 238  ENVKRSFPRCAIELQEAGIKFKKVEEQNLF-DISFRNGVMRIPTLTIRDETQCIMRNLIA 296

Query: 1045 SEQCYAGRST-YITSYAFFMDNLINSPNDVRILRHYKIITNCLGDDEDVSILFNKLCSEV 1221
             EQ     S  Y++ Y  FMD+LINS  DV +L    II N LGDD+ V+IL NK+   V
Sbjct: 297  YEQLIPRSSPIYVSDYMIFMDSLINSEKDVELLCRKGIIENWLGDDKAVAILCNKIGDNV 356

Query: 1222 TLVNYYYSDLCDLVNEYCEVTWHAWQATLKRDYFHNPWAIISFVGAILIIFLTFTATLFG 1401
                  Y+++   VN +C   W+ W A L+ +YFH+PWA+IS + AI+++FLTF+ TL+ 
Sbjct: 357  FCDRALYAEIQYSVNMHCNKRWNVWMAKLRHNYFHSPWALISVLAAIILLFLTFSQTLYS 416

Query: 1402 MLSF 1413
            + S+
Sbjct: 417  VFSY 420


>ref|XP_002278393.1| PREDICTED: UPF0481 protein At3g47200-like [Vitis vinifera]
          Length = 527

 Score =  278 bits (710), Expect = 4e-72
 Identities = 178/451 (39%), Positives = 257/451 (56%), Gaps = 39/451 (8%)
 Frame = +1

Query: 178  SIKIKLDKVSPSPSGKS---CCIYKVHEKFRKVNEYAYTPEMVSIGPFHTAKLALQAMED 348
            SIK KL++     +  S    CIY++    R+ ++ AY P++VS+GP+H  +  L+ M+ 
Sbjct: 80   SIKEKLEQAHQDDAADSWAKLCIYRLPHYLREGDDKAYIPQIVSLGPYHHGRRRLRNMDR 139

Query: 349  HKLRYMHVLLSRTTSLETKLAECVESIGKLEEKARKCYSEPTDHLDRDKFIEMMVVDGLF 528
            HK R +H +L RT      +   ++++ +LEEKAR CY E T  L  ++F+EMMV+DG F
Sbjct: 140  HKWRSLHHILKRTNH---DIEIYLDAMKELEEKARACY-EGTICLSSNEFVEMMVLDGCF 195

Query: 529  ILELFGKSAGVAK---YRNNDTIFNNIWGMPSVVRDLILLENQLPMIVLDCLFEIV---E 690
            ILELF   AG  K   Y  ND +F     M S+ RD+I+LENQ+P+ VL+ L  I     
Sbjct: 196  ILELFRGVAGGFKHLGYARNDPVFAIRGSMHSIQRDMIMLENQIPLFVLERLLGIQLGQP 255

Query: 691  ESLGGHSLNELTLRFFNQLMPRDG----------------NDALQKYYNCHGKHLLDLFS 822
            E  G   + +L LRFF+ LMP D                         +  G H L++F 
Sbjct: 256  EQKG--LVAKLALRFFDPLMPTDEPLTKSDRNRLESSLGYTTTFDPLGDQGGLHCLEVFR 313

Query: 823  KTF---HPASLPQRETKK---------KVELKHIPCVTELRQAGVKFKKGSTTGSFVDIK 966
            ++     P  +P+   K+         K   + I CVT+LR+AG+KFKK  T   F DIK
Sbjct: 314  RSLLRTGPRPVPRIWMKRWSHSNRVADKRRQQLIHCVTQLREAGIKFKKRKTD-RFWDIK 372

Query: 967  FVDGVMEIPPILIQDQTDTLLRNLIASEQCYAGRSTYITSYAFFMDNLINSPNDVRILRH 1146
            F +G++ IP +LI D T +L  NLIA EQC+   S  ITSY  FMD+LINSP DV  L +
Sbjct: 373  FKNGILRIPRLLIHDGTKSLFLNLIAFEQCHLDCSNDITSYVIFMDSLINSPEDVGYLHY 432

Query: 1147 YKIITNCLGDDEDVSILFNKLCSEVT--LVNYYYSDLCDLVNEYCEVTWHAWQATLKRDY 1320
              I+ + LG + +V+ LFN+LC EV   + + Y S L + VN+Y    W+AW+A+LK +Y
Sbjct: 433  CGIMEHWLGSESEVADLFNRLCQEVVFDINDSYLSSLSEQVNKYYNHRWNAWRASLKHNY 492

Query: 1321 FHNPWAIISFVGAILIIFLTFTATLFGMLSF 1413
            F +PW IISFV A++++ LTF  T + + S+
Sbjct: 493  FSSPWTIISFVAAVVLLALTFAQTFYAVYSY 523


>ref|XP_002328069.1| predicted protein [Populus trichocarpa] gi|222837584|gb|EEE75949.1|
            predicted protein [Populus trichocarpa]
          Length = 458

 Score =  278 bits (710), Expect = 4e-72
 Identities = 171/445 (38%), Positives = 252/445 (56%), Gaps = 11/445 (2%)
 Frame = +1

Query: 112  NEQNGRDHVLIQISELNKVLAASIKIK---LDKVSPSPSGKS-CCIYKVHEKFRKVNEYA 279
            N     DHV   I+E ++    S++ K   L K+  + +GKS CCI++V +   ++N+ A
Sbjct: 15   NAGTSDDHVT-SITEADRQWLKSVETKTKLLPKLLNNSAGKSSCCIFRVPQSLFEINKMA 73

Query: 280  YTPEMVSIGPFHTAKLALQAMEDHKLRYMHVLLSRTTSLETKLAECVESIGKLEEKARKC 459
            Y P +VSIGP+H  K+ L+ +E+HK R++  +L+RT      + +  ++I  +EEK R C
Sbjct: 74   YQPHIVSIGPYHHGKVHLKMIEEHKWRFLGGVLARTQQHGIGINDFFKAIAPIEEKIRDC 133

Query: 460  YSEPTDHLDRDKFIEMMVVDGLFILELFGKSAGVAKYRNNDTIFNNIWGMPSVVRDLILL 639
            YSE T    R +FIEMMV+DG FI+ELF    G+ +   +D IFN       ++RDL+ L
Sbjct: 134  YSE-TIECSRQEFIEMMVLDGCFIIELFCIVGGIVQTDIDDPIFNMTRMFFFIMRDLLRL 192

Query: 640  ENQLPMIVLDCLFE---IVEESLGGHSLNELTLRFFNQLMPRDGNDALQKYYNCHGKHLL 810
            ENQ+P  VL+ LFE   +        S  EL L FF+    R   + L++Y +  GKHLL
Sbjct: 193  ENQIPFFVLETLFETSILSSRKQNVSSFAELALEFFDYAAQRPP-EVLRRYKDIRGKHLL 251

Query: 811  DLFSKTFHPASLPQRETKKKVE--LKHIPCVTELRQAGVKFKKGSTTGSFVDIKFVDGVM 984
            DLF  T  P+S   +E   K+   L+ I    +L QAG+KFK   T  SF+DI+F +GV+
Sbjct: 252  DLFRSTIIPSS---QEVPGKISPFLQLIQSAKKLHQAGIKFKPRETD-SFLDIEFSNGVL 307

Query: 985  EIPPILIQDQTDTLLRNLIASEQCYAGRSTYITSYAFFMDNLINSPNDVRILRHYKIITN 1164
            EIP + + D T +++ N +A EQCY   S +ITSY  FM  LIN+P+D   L  YKI+ N
Sbjct: 308  EIPLLTVDDFTTSVILNCVAFEQCYNHCSNHITSYVTFMGCLINAPSDAGFLCDYKIVEN 367

Query: 1165 CLGDDEDVSILFNKLCSEVT--LVNYYYSDLCDLVNEYCEVTWHAWQATLKRDYFHNPWA 1338
              G DE+V+  FN +  +VT  +   Y S + + VNE+    WH   A     YF  PW+
Sbjct: 368  YFGTDEEVARFFNNVGKDVTFDIQRSYLSKVFEDVNEHYSNNWHVRWAGFMHTYFDTPWS 427

Query: 1339 IISFVGAILIIFLTFTATLFGMLSF 1413
             IS + A++++ LT     F    +
Sbjct: 428  FISALAAVVLLILTMIQAFFAFYGY 452


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