BLASTX nr result
ID: Coptis23_contig00008522
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00008522
(1231 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera] 469 e-130
ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44... 469 e-130
ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|2... 439 e-121
ref|XP_002304005.1| f-box family protein [Populus trichocarpa] g... 431 e-118
ref|XP_002309282.1| f-box family protein [Populus trichocarpa] g... 426 e-117
>emb|CAN71047.1| hypothetical protein VITISV_015116 [Vitis vinifera]
Length = 343
Score = 469 bits (1207), Expect = e-130
Identities = 219/340 (64%), Positives = 264/340 (77%), Gaps = 1/340 (0%)
Frame = +3
Query: 120 EIIPCLPEDIGFECLTRLSYTTHRVASRVCHQWRVLLQSKEFYYQRKKEGKTHKVACLVY 299
E+IP LPE+I EC TRL YT+HRVA++VC +W LLQ KEFYY RK+ G THK ACLV
Sbjct: 6 ELIPGLPEEIALECFTRLPYTSHRVAAQVCRRWGELLQGKEFYYXRKQTGFTHKAACLVQ 65
Query: 300 SLPSQTDSDGRKQTGSPSPSYGIVVFDPVNDNWVKLNPIPKYPNGLPLFCQLSSVEGKLV 479
+LP ++SDGRK PS YGI VFD V+ W ++ P+PKYP+GLPLFCQ++S EGKLV
Sbjct: 66 ALPVLSESDGRKPVRPPS--YGISVFDSVSRTWERIAPVPKYPDGLPLFCQVTSSEGKLV 123
Query: 480 VMGGWDPVSWDPVSHVFVYDFMTQRWTQGNDMPSKRSFFAASAFDGRVYIAGGHDESKNA 659
VMGGWDP S+DPV VFVYDF T+RW QG DMPSKRSFFAA +GR+++AGGHD+SKNA
Sbjct: 124 VMGGWDPESYDPVKDVFVYDFTTRRWKQGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNA 183
Query: 660 LKSAWVYSVREDEWTELTQLSEERDECQGIIVGNEFWVVSGYGTERQGXXXXXXXXXXXX 839
L +AWVY VR DEW+ELT++S+ERDECQG+++G+EFWVVSGYGTE QG
Sbjct: 184 LSTAWVYDVRRDEWSELTRMSDERDECQGVVIGSEFWVVSGYGTESQGGFVKSAESLDLE 243
Query: 840 TRQWKRVEGKWSGNRCPRGCVGVSKDGNLMSWADLDSRVRVGACAVDLGDLTFVTGSAYQ 1019
T +W RV+ W N+CPR CVGV KDG L SWA+ D+ V VGACAVDLGD T +TGSAYQ
Sbjct: 244 TGRWSRVDEAWGTNQCPRSCVGVGKDGKLFSWAESDTAVGVGACAVDLGDWTLLTGSAYQ 303
Query: 1020 GATQGFFLVDVKKGEK-KLEQVNVPNEFSGFVQSGCCVEI 1136
GA QGFFLV+ K+G+ KLE++ V + FSGFVQSGCCVEI
Sbjct: 304 GAPQGFFLVERKEGQNGKLERIEVGDGFSGFVQSGCCVEI 343
>ref|XP_002281267.2| PREDICTED: F-box/kelch-repeat protein At2g44130 [Vitis vinifera]
Length = 355
Score = 469 bits (1206), Expect = e-130
Identities = 219/340 (64%), Positives = 264/340 (77%), Gaps = 1/340 (0%)
Frame = +3
Query: 120 EIIPCLPEDIGFECLTRLSYTTHRVASRVCHQWRVLLQSKEFYYQRKKEGKTHKVACLVY 299
E+IP LPE+I EC TRL YT+HRVA++VC +W LLQ KEFYY RK+ G THK ACLV
Sbjct: 18 ELIPGLPEEIALECFTRLPYTSHRVAAQVCRRWGELLQGKEFYYLRKQTGFTHKAACLVQ 77
Query: 300 SLPSQTDSDGRKQTGSPSPSYGIVVFDPVNDNWVKLNPIPKYPNGLPLFCQLSSVEGKLV 479
+LP ++SDGRK PS YGI VFD V+ W ++ P+PKYP+GLPLFCQ++S EGKLV
Sbjct: 78 ALPVLSESDGRKPVRPPS--YGISVFDSVSRTWERIAPVPKYPDGLPLFCQVTSSEGKLV 135
Query: 480 VMGGWDPVSWDPVSHVFVYDFMTQRWTQGNDMPSKRSFFAASAFDGRVYIAGGHDESKNA 659
VMGGWDP S+DPV VFVYDF T+RW QG DMPSKRSFFAA +GR+++AGGHD+SKNA
Sbjct: 136 VMGGWDPESYDPVKDVFVYDFTTRRWKQGRDMPSKRSFFAAGELEGRIFVAGGHDDSKNA 195
Query: 660 LKSAWVYSVREDEWTELTQLSEERDECQGIIVGNEFWVVSGYGTERQGXXXXXXXXXXXX 839
L +AWVY VR DEW+ELT++S+ERDECQG+++G+EFWVVSGYGTE QG
Sbjct: 196 LSTAWVYDVRRDEWSELTRMSDERDECQGVVIGSEFWVVSGYGTESQGGFVKSAESLDLE 255
Query: 840 TRQWKRVEGKWSGNRCPRGCVGVSKDGNLMSWADLDSRVRVGACAVDLGDLTFVTGSAYQ 1019
T +W RV+ W N+CPR CVGV KDG L SWA+ D+ V VGACAVDLGD T +TGSAYQ
Sbjct: 256 TGRWSRVDEAWGTNQCPRSCVGVGKDGKLFSWAESDTAVGVGACAVDLGDWTLLTGSAYQ 315
Query: 1020 GATQGFFLVDVKKGEK-KLEQVNVPNEFSGFVQSGCCVEI 1136
GA QGFFLV+ K+G+ KLE++ V + FSGFVQSGCCVEI
Sbjct: 316 GAPQGFFLVERKEGQNGKLERIEVGDGFSGFVQSGCCVEI 355
>ref|XP_002297641.1| predicted protein [Populus trichocarpa] gi|222844899|gb|EEE82446.1|
predicted protein [Populus trichocarpa]
Length = 345
Score = 439 bits (1129), Expect = e-121
Identities = 203/340 (59%), Positives = 251/340 (73%), Gaps = 1/340 (0%)
Frame = +3
Query: 120 EIIPCLPEDIGFECLTRLSYTTHRVASRVCHQWRVLLQSKEFYYQRKKEGKTHKVACLVY 299
E IP LP+++G EC+TRL YT HRVAS+VC QWR LL+SK+FYY RKK G THKVACLV
Sbjct: 8 EFIPSLPQELGLECMTRLPYTAHRVASQVCKQWRELLESKDFYYHRKKLGYTHKVACLVQ 67
Query: 300 SLPSQTDSDGRKQTGSPSPSYGIVVFDPVNDNWVKLNPIPKYPNGLPLFCQLSSVEGKLV 479
+ S G K SPS +GI VFD V+ W +L+P+PKYPNGLPLFCQL+S EGKLV
Sbjct: 68 AAHRADVSQGSKPGNSPS--FGITVFDSVSQTWQRLDPVPKYPNGLPLFCQLASCEGKLV 125
Query: 480 VMGGWDPVSWDPVSHVFVYDFMTQRWTQGNDMPSKRSFFAASAFDGRVYIAGGHDESKNA 659
VMGGWDPVS++ VSHVFVYDF T++W +G +MPSKRSFFA A+ GR+Y+ GGHDE+KNA
Sbjct: 126 VMGGWDPVSYEQVSHVFVYDFTTRKWREGKEMPSKRSFFAIGAYSGRIYVVGGHDENKNA 185
Query: 660 LKSAWVYSVREDEWTELTQLSEERDECQGIIVGNEFWVVSGYGTERQGXXXXXXXXXXXX 839
LK+ WVY + ++EWTEL Q+S+ERDEC+G+++G+EFW VSGY T+ QG
Sbjct: 186 LKTGWVYDLSKEEWTELNQMSQERDECEGVVIGDEFWAVSGYRTDNQGEFEESAEVYEFR 245
Query: 840 TRQWKRVEGKWSGNRCPRGCVGVSKDGNLMSWADLDSRVRVGACAVDLGDLTFVTGSAYQ 1019
+ QW+RV+ W RCPR VG KDG LMSWADLD VRV + G V GS
Sbjct: 246 SGQWRRVKEAWIPGRCPRSSVGAGKDGRLMSWADLDPAVRVAVRGIMFGFRVMVAGSDSP 305
Query: 1020 GATQGFFLVDVKKGEK-KLEQVNVPNEFSGFVQSGCCVEI 1136
GA QGF++V++K G+ +LE++NVP EFSGFVQSGCCVEI
Sbjct: 306 GAPQGFYMVEMKDGQNGQLEKINVPEEFSGFVQSGCCVEI 345
>ref|XP_002304005.1| f-box family protein [Populus trichocarpa]
gi|222841437|gb|EEE78984.1| f-box family protein [Populus
trichocarpa]
Length = 345
Score = 431 bits (1109), Expect = e-118
Identities = 198/340 (58%), Positives = 252/340 (74%), Gaps = 1/340 (0%)
Frame = +3
Query: 120 EIIPCLPEDIGFECLTRLSYTTHRVASRVCHQWRVLLQSKEFYYQRKKEGKTHKVACLVY 299
E+IP LP+++G EC+TRL YT HRVAS+VC QW LL+SK+FYY RKK G THKVACLV
Sbjct: 8 ELIPSLPQELGLECMTRLPYTAHRVASQVCKQWCDLLESKDFYYHRKKLGYTHKVACLVQ 67
Query: 300 SLPSQTDSDGRKQTGSPSPSYGIVVFDPVNDNWVKLNPIPKYPNGLPLFCQLSSVEGKLV 479
++ G KQ SP +GI VFD + W +L+P+P YP LPLFCQL+S EGKLV
Sbjct: 68 AVHGADVLQGSKQGNSPC--FGISVFDSASQTWERLDPVPNYPIELPLFCQLASCEGKLV 125
Query: 480 VMGGWDPVSWDPVSHVFVYDFMTQRWTQGNDMPSKRSFFAASAFDGRVYIAGGHDESKNA 659
VMGGWDPVS++ VSHVFVYDF T++W +G +MPSKRSFFA ++ GRVY+ GGHDE+KNA
Sbjct: 126 VMGGWDPVSYEQVSHVFVYDFTTRKWREGKEMPSKRSFFAIGSYSGRVYVVGGHDENKNA 185
Query: 660 LKSAWVYSVREDEWTELTQLSEERDECQGIIVGNEFWVVSGYGTERQGXXXXXXXXXXXX 839
L++ WVY + +DEWTEL Q+S+ERDEC+G+++G+EFWVVSGYGT+ QG
Sbjct: 186 LRTGWVYDLSKDEWTELAQMSQERDECEGVVIGDEFWVVSGYGTDNQGAFEGNAEVYEFG 245
Query: 840 TRQWKRVEGKWSGNRCPRGCVGVSKDGNLMSWADLDSRVRVGACAVDLGDLTFVTGSAYQ 1019
+ QW++V+ W RCPR CVGV KDG LMSWADLD VR G + LG +TG Q
Sbjct: 246 SGQWRQVKKAWIPGRCPRSCVGVGKDGRLMSWADLDPMVRAGVRGIPLGSRVMLTGLDNQ 305
Query: 1020 GATQGFFLVDVKKGEK-KLEQVNVPNEFSGFVQSGCCVEI 1136
G+ + F+L+++K G+ KLE++ VP+EFSGFVQSGCCVEI
Sbjct: 306 GSPEEFYLIEMKDGQNGKLEKIIVPDEFSGFVQSGCCVEI 345
>ref|XP_002309282.1| f-box family protein [Populus trichocarpa]
gi|222855258|gb|EEE92805.1| f-box family protein [Populus
trichocarpa]
Length = 337
Score = 426 bits (1095), Expect = e-117
Identities = 193/339 (56%), Positives = 252/339 (74%)
Frame = +3
Query: 120 EIIPCLPEDIGFECLTRLSYTTHRVASRVCHQWRVLLQSKEFYYQRKKEGKTHKVACLVY 299
E+IP LP++I ECL RL YTTHRVAS+VC +WR +LQS++FYYQRK+ G THK ACL+
Sbjct: 3 ELIPSLPDEIALECLFRLHYTTHRVASQVCKRWRPVLQSRDFYYQRKQNGLTHKAACLIQ 62
Query: 300 SLPSQTDSDGRKQTGSPSPSYGIVVFDPVNDNWVKLNPIPKYPNGLPLFCQLSSVEGKLV 479
++P Q S K G P YG+ +FD VN +W +++P+P YP+GLPLFCQ++S EGKLV
Sbjct: 63 AIPDQNGSSQPKPIGPPK--YGVSIFDSVNGSWDRVDPVPAYPDGLPLFCQVTSSEGKLV 120
Query: 480 VMGGWDPVSWDPVSHVFVYDFMTQRWTQGNDMPSKRSFFAASAFDGRVYIAGGHDESKNA 659
++GGWDPV ++P+S VFVY+F T++W +G DMP RSFFA +GR+ IAGGHDE+KNA
Sbjct: 121 LLGGWDPVKYEPLSQVFVYEFTTRQWRRGKDMPENRSFFAVGELNGRIIIAGGHDENKNA 180
Query: 660 LKSAWVYSVREDEWTELTQLSEERDECQGIIVGNEFWVVSGYGTERQGXXXXXXXXXXXX 839
LK+AWVY V +DEW EL Q+S+ERDEC+G+++G+EFWVVSGY T+ QG
Sbjct: 181 LKTAWVYDVIQDEWAELPQMSQERDECEGVVIGSEFWVVSGYRTDSQGGFEGSAESIELG 240
Query: 840 TRQWKRVEGKWSGNRCPRGCVGVSKDGNLMSWADLDSRVRVGACAVDLGDLTFVTGSAYQ 1019
+WKRVE W ++CPR +GV D L SWA+ DS ++VGA +V LG+ TFV+GSA++
Sbjct: 241 ASKWKRVEDAWKASQCPRSSLGVGSDEKLFSWAESDSALKVGASSVHLGEKTFVSGSAHE 300
Query: 1020 GATQGFFLVDVKKGEKKLEQVNVPNEFSGFVQSGCCVEI 1136
G QGFFLVD + G K E++NV EF GFVQSGCCVEI
Sbjct: 301 GGPQGFFLVDGQNG--KWEKLNVTGEFCGFVQSGCCVEI 337