BLASTX nr result

ID: Coptis23_contig00008521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008521
         (1309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34509.3| unnamed protein product [Vitis vinifera]              486   e-135
ref|XP_002299456.1| predicted protein [Populus trichocarpa] gi|2...   482   e-133
ref|XP_002518849.1| 3-oxoacyl-[acyl-carrier-protein] synthase, p...   479   e-133
ref|XP_003530435.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   464   e-128
ref|XP_002265207.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] ...   464   e-128

>emb|CBI34509.3| unnamed protein product [Vitis vinifera]
          Length = 488

 Score =  486 bits (1252), Expect = e-135
 Identities = 241/321 (75%), Positives = 279/321 (86%), Gaps = 1/321 (0%)
 Frame = -3

Query: 1130 MVAITAPCSSNLVIRNGELRSNSRVSSVQYNGLRPLETKQMVSDKSKQTGFLCSSTRRAR 951
            M A    CSS +  R  E  S +     QY+GLRP+E+K+M S   + +G + S  R+ R
Sbjct: 1    MAAFAGICSSGVRFRGKESGSLA-----QYHGLRPVESKKMASAMVRPSGSISSPARKCR 55

Query: 950  PVRAINS-TTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGESGISLIDRFDA 774
             +RA+ S T SAPKREKDPKKR+VITGMGLVSVFG+D+ TFYD+LL G SGISLIDRFDA
Sbjct: 56   TIRAVASPTVSAPKREKDPKKRIVITGMGLVSVFGSDIDTFYDKLLQGVSGISLIDRFDA 115

Query: 773  STFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCIVAGKKALEDASLGPGVLDTMDKSK 594
            S FSVRF GQIRDFSSKGYIDGKNDRRLDDCWRYC+VAG++AL++ASLG  VL+TMD+S+
Sbjct: 116  SNFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGRRALDNASLGTEVLETMDRSR 175

Query: 593  IGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAIDTGLMGPNYSI 414
            IGVLVG+GMGGL+AFS+GVE+L  KG+KKI+PFFIPYSITNMGSALLAIDTGLMGPNYSI
Sbjct: 176  IGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 235

Query: 413  STACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATGVGGFIACRALSQRNDEPQRAS 234
            STACATANYCFYAAANHIRRGEADIMV GGTEAA++ATGVGGFIACRALSQRN++PQ+AS
Sbjct: 236  STACATANYCFYAAANHIRRGEADIMVAGGTEAAIMATGVGGFIACRALSQRNEDPQKAS 295

Query: 233  RPWDKDRDGFVIGEGAGVLVM 171
            RPWDKDRDGFV+GEG+GVL+M
Sbjct: 296  RPWDKDRDGFVMGEGSGVLIM 316


>ref|XP_002299456.1| predicted protein [Populus trichocarpa] gi|222846714|gb|EEE84261.1|
            predicted protein [Populus trichocarpa]
          Length = 495

 Score =  482 bits (1240), Expect = e-133
 Identities = 239/318 (75%), Positives = 279/318 (87%), Gaps = 3/318 (0%)
 Frame = -3

Query: 1115 APCSSNLVIRNGELRSNSRVSSVQYNGLRPLETKQMVSDKSKQTGFLCSS--TRRARPVR 942
            A CSSN++  + E+ S+   S  QY GLRP+E  Q+     + +G + +S  T ++R +R
Sbjct: 7    AACSSNVLFGSREVGSDG-ASLAQYRGLRPVENMQLAPTGRRPSGSISTSGMTSKSRTIR 65

Query: 941  A-INSTTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGESGISLIDRFDASTF 765
            A ++ T SAPKREKDPKKRVVITGMGLVSVFG+ + TFYD+LL GESGISLIDRFDAS+F
Sbjct: 66   AMVSQTVSAPKREKDPKKRVVITGMGLVSVFGSGIDTFYDKLLEGESGISLIDRFDASSF 125

Query: 764  SVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCIVAGKKALEDASLGPGVLDTMDKSKIGV 585
            SVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYC+VAGK+ALEDA+LG  VL+ MD+++IGV
Sbjct: 126  SVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALEDANLGSEVLENMDRTRIGV 185

Query: 584  LVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAIDTGLMGPNYSISTA 405
            LVGTGMGGL+AFS+GVESL  KG+KK+SPFFIPYSITNMGSALLAIDTGLMGPNYSISTA
Sbjct: 186  LVGTGMGGLTAFSNGVESLVQKGYKKMSPFFIPYSITNMGSALLAIDTGLMGPNYSISTA 245

Query: 404  CATANYCFYAAANHIRRGEADIMVTGGTEAAVIATGVGGFIACRALSQRNDEPQRASRPW 225
            CATANYCFY+AANHIRRGEADIMV GGTEA+VI  GVGGFIACRALSQRN++P++ASRPW
Sbjct: 246  CATANYCFYSAANHIRRGEADIMVAGGTEASVIPAGVGGFIACRALSQRNEDPKKASRPW 305

Query: 224  DKDRDGFVIGEGAGVLVM 171
            DKDRDGFV+GEG+GVL+M
Sbjct: 306  DKDRDGFVMGEGSGVLIM 323


>ref|XP_002518849.1| 3-oxoacyl-[acyl-carrier-protein] synthase, putative [Ricinus
            communis] gi|223541836|gb|EEF43382.1|
            3-oxoacyl-[acyl-carrier-protein] synthase, putative
            [Ricinus communis]
          Length = 485

 Score =  479 bits (1232), Expect = e-133
 Identities = 242/322 (75%), Positives = 280/322 (86%), Gaps = 2/322 (0%)
 Frame = -3

Query: 1130 MVAITAPCSSN-LVIRNGELRSNSRVSSVQYNGLRPLETKQMVSDKSKQTGFLCSSTRRA 954
            M +I   CSSN L ++NG        S  Q+NGLRP+E  QM +  +K TGFL +   ++
Sbjct: 1    MASIAGTCSSNVLCMKNG-------ASLGQFNGLRPVENMQMAA--TKPTGFLFTLAPKS 51

Query: 953  RPVRAINSTT-SAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGESGISLIDRFD 777
              ++A+ S   SAPKRE+DPKKRVVITGMGLVSVFG+D+ TFY++LL GESGISLIDRFD
Sbjct: 52   GIIKAMASPNISAPKRERDPKKRVVITGMGLVSVFGSDIDTFYNKLLEGESGISLIDRFD 111

Query: 776  ASTFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCIVAGKKALEDASLGPGVLDTMDKS 597
            AS FSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYC+VAGK+AL+DA+LG  VL+ MD++
Sbjct: 112  ASGFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGKRALDDANLGSQVLEDMDRT 171

Query: 596  KIGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAIDTGLMGPNYS 417
            KIGVL+GTGMGGL+AFS+GVE+L  KG+KKI+PFFIPYSITNMGSALLAIDTGLMGPNYS
Sbjct: 172  KIGVLIGTGMGGLTAFSNGVEALVQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYS 231

Query: 416  ISTACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATGVGGFIACRALSQRNDEPQRA 237
            ISTACATANYCFYAAANHIRRGEADIMV GGTEAAV+ TGVGGFIACRALSQRN++P+RA
Sbjct: 232  ISTACATANYCFYAAANHIRRGEADIMVVGGTEAAVMPTGVGGFIACRALSQRNEDPKRA 291

Query: 236  SRPWDKDRDGFVIGEGAGVLVM 171
            SRPWDK+RDGFV+GEGAGVL+M
Sbjct: 292  SRPWDKNRDGFVMGEGAGVLIM 313


>ref|XP_003530435.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I,
            chloroplastic-like [Glycine max]
          Length = 491

 Score =  464 bits (1193), Expect = e-128
 Identities = 231/321 (71%), Positives = 269/321 (83%), Gaps = 1/321 (0%)
 Frame = -3

Query: 1130 MVAITAPCSSNLVIRNGELRSNSRVSSVQYNGLRPLETKQMVSDKSKQTGFLCSSTRRAR 951
            M  I   C    ++RN    +N ++S V Y GLR  +  QM S     +    SS  R R
Sbjct: 1    MAGIAGTCPLGALLRNSVSENNGKISVVHYEGLRLQQRMQMPSPSQYISA--SSSAPRCR 58

Query: 950  PVRAINS-TTSAPKREKDPKKRVVITGMGLVSVFGNDVTTFYDRLLAGESGISLIDRFDA 774
             ++A+ S T  APKREKDPKKRVVITGMGLVSVFG+DV  FY++LL GESGISLIDRFDA
Sbjct: 59   TIKAMASPTVGAPKREKDPKKRVVITGMGLVSVFGSDVDAFYNKLLEGESGISLIDRFDA 118

Query: 773  STFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCIVAGKKALEDASLGPGVLDTMDKSK 594
            S FSVRF GQIRDFSS+GYIDGKNDRRLD+CWRYCIVAGK+AL+DA+LG  VLDTMDK++
Sbjct: 119  SNFSVRFGGQIRDFSSEGYIDGKNDRRLDNCWRYCIVAGKRALDDANLGKQVLDTMDKTR 178

Query: 593  IGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSITNMGSALLAIDTGLMGPNYSI 414
            IGVLVG+GMGG++AFS+GVE+L  KG+KKI+PFFIPYSITNMGSALLAIDTGLMGPNYSI
Sbjct: 179  IGVLVGSGMGGITAFSNGVEALVQKGYKKITPFFIPYSITNMGSALLAIDTGLMGPNYSI 238

Query: 413  STACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATGVGGFIACRALSQRNDEPQRAS 234
            STACATANYCF AAANHIR+GEADIMV GGTEAA++ +G+GGFIACRALS RN++P++AS
Sbjct: 239  STACATANYCFCAAANHIRKGEADIMVVGGTEAAIMPSGLGGFIACRALSHRNEDPKKAS 298

Query: 233  RPWDKDRDGFVIGEGAGVLVM 171
            RPWDKDRDGFV+GEG+GVLVM
Sbjct: 299  RPWDKDRDGFVMGEGSGVLVM 319


>ref|XP_002265207.1| PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I,
            chloroplastic-like [Vitis vinifera]
          Length = 453

 Score =  464 bits (1193), Expect = e-128
 Identities = 225/281 (80%), Positives = 257/281 (91%), Gaps = 1/281 (0%)
 Frame = -3

Query: 1010 MVSDKSKQTGFLCSSTRRARPVRAINS-TTSAPKREKDPKKRVVITGMGLVSVFGNDVTT 834
            M S   + +G + S  R+ R +RA+ S T SAPKREKDPKKR+VITGMGLVSVFG+D+ T
Sbjct: 1    MASAMVRPSGSISSPARKCRTIRAVASPTVSAPKREKDPKKRIVITGMGLVSVFGSDIDT 60

Query: 833  FYDRLLAGESGISLIDRFDASTFSVRFAGQIRDFSSKGYIDGKNDRRLDDCWRYCIVAGK 654
            FYD+LL G SGISLIDRFDAS FSVRF GQIRDFSSKGYIDGKNDRRLDDCWRYC+VAG+
Sbjct: 61   FYDKLLQGVSGISLIDRFDASNFSVRFGGQIRDFSSKGYIDGKNDRRLDDCWRYCLVAGR 120

Query: 653  KALEDASLGPGVLDTMDKSKIGVLVGTGMGGLSAFSSGVESLTLKGFKKISPFFIPYSIT 474
            +AL++ASLG  VL+TMD+S+IGVLVG+GMGGL+AFS+GVE+L  KG+KKI+PFFIPYSIT
Sbjct: 121  RALDNASLGTEVLETMDRSRIGVLVGSGMGGLTAFSNGVEALIQKGYKKITPFFIPYSIT 180

Query: 473  NMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVTGGTEAAVIATGV 294
            NMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMV GGTEAA++ATGV
Sbjct: 181  NMGSALLAIDTGLMGPNYSISTACATANYCFYAAANHIRRGEADIMVAGGTEAAIMATGV 240

Query: 293  GGFIACRALSQRNDEPQRASRPWDKDRDGFVIGEGAGVLVM 171
            GGFIACRALSQRN++PQ+ASRPWDKDRDGFV+GEG+GVL+M
Sbjct: 241  GGFIACRALSQRNEDPQKASRPWDKDRDGFVMGEGSGVLIM 281


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