BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008497
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   112   1e-22
ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|2...   102   8e-20
ref|XP_002297966.1| predicted protein [Populus trichocarpa] gi|2...   100   3e-19
ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a...   100   4e-19
ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a...    99   1e-18

>ref|XP_002264149.1| PREDICTED: RING-H2 zinc finger protein RHA4a [Vitis vinifera]
           gi|297742383|emb|CBI34532.3| unnamed protein product
           [Vitis vinifera]
          Length = 248

 Score =  112 bits (279), Expect = 1e-22
 Identities = 48/83 (57%), Positives = 58/83 (69%)
 Frame = +2

Query: 2   CCVCLGDFELKEQLHQIPSCKHLFHIDCIHHWLKANFTCPLCRCYIFSTKKLNAEPPPVR 181
           CCVCLG+FE+KE+LHQ+PSCKH+FH DCI+HWL+ N TCPLCRC +F   K      PVR
Sbjct: 103 CCVCLGEFEIKEELHQVPSCKHVFHADCIYHWLRTNSTCPLCRCSVFPNTKAGNPVSPVR 162

Query: 182 IDVLHPIDAASEQHRPLASPAQQ 250
            +  HP +  S QHR   S  QQ
Sbjct: 163 SE--HPDNQNSNQHRQNVSSQQQ 183


>ref|XP_002304565.1| predicted protein [Populus trichocarpa] gi|222841997|gb|EEE79544.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  102 bits (255), Expect = 8e-20
 Identities = 58/117 (49%), Positives = 71/117 (60%), Gaps = 9/117 (7%)
 Frame = +2

Query: 2   CCVCLGDFELKEQLHQIPSCKHLFHIDCIHHWLKANFTCPLCRCY-IFSTKKLNAEPPPV 178
           CCVCLG+FE+KE+L QIPSCKH+FHIDCIHHWL +N TCPLCRCY IF        PP  
Sbjct: 101 CCVCLGEFEIKEELLQIPSCKHVFHIDCIHHWLHSNSTCPLCRCYVIFPANIFCTNPPQS 160

Query: 179 RIDVL---HPIDAASEQHRPLASPAQQIN--GAINRTSLDHPSEE---IMSQV*EST 325
              VL     + A S Q + + S  QQ    GA +   L  P EE   + SQ+ +S+
Sbjct: 161 SGPVLLLQSSVGANSHQPQNITSELQQQQDVGAGSTEQLVIPMEEPSSVTSQLRDSS 217


>ref|XP_002297966.1| predicted protein [Populus trichocarpa] gi|222845224|gb|EEE82771.1|
           predicted protein [Populus trichocarpa]
          Length = 310

 Score =  100 bits (250), Expect = 3e-19
 Identities = 53/123 (43%), Positives = 73/123 (59%), Gaps = 3/123 (2%)
 Frame = +2

Query: 2   CCVCLGDFELKEQLHQIPSCKHLFHIDCIHHWLKANFTCPLCRCY-IFSTKKLNAEPPPV 178
           CCVCLG+FE++E++ QIPSCKH+FHIDCIHHWL +N TCPLCRCY IF T K    P   
Sbjct: 152 CCVCLGEFEIEEEVLQIPSCKHVFHIDCIHHWLHSNSTCPLCRCYVIFPTTKFCTSPLQS 211

Query: 179 RIDVLHPIDAASEQH--RPLASPAQQINGAINRTSLDHPSEEIMSQV*ESTSGRTCLREA 352
              ++ P  +A+  H     + P QQ +     T      E+ +  +  + S  T LR++
Sbjct: 212 SGPMILPQSSANSHHPQNMTSEPQQQEDVGAGST------EQFVIPMEGTASVTTQLRDS 265

Query: 353 TNL 361
           + L
Sbjct: 266 SGL 268


>ref|XP_003543993.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 214

 Score =  100 bits (249), Expect = 4e-19
 Identities = 44/79 (55%), Positives = 54/79 (68%)
 Frame = +2

Query: 2   CCVCLGDFELKEQLHQIPSCKHLFHIDCIHHWLKANFTCPLCRCYIFSTKKLNAEPPPVR 181
           CCVCLG+FELKE+L QIP CKH+FH++CIHHWL++N TCPLCRC I  T K     PP+ 
Sbjct: 108 CCVCLGEFELKEELVQIPYCKHVFHLECIHHWLQSNSTCPLCRCSIIPTTKFLNPAPPIN 167

Query: 182 IDVLHPIDAASEQHRPLAS 238
           I    P     +QH  + S
Sbjct: 168 IISTDP----PQQHGAIIS 182


>ref|XP_003556854.1| PREDICTED: RING-H2 zinc finger protein RHA4a-like [Glycine max]
          Length = 211

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 47/83 (56%), Positives = 55/83 (66%), Gaps = 1/83 (1%)
 Frame = +2

Query: 2   CCVCLGDFELKEQLHQIPSCKHLFHIDCIHHWLKANFTCPLCRCYIF-STKKLNAEPPPV 178
           CCVCLG+FELKE++ QIP CKH+FH +CIHHWL++N TCPLCRC I  +TK LN  PP  
Sbjct: 108 CCVCLGEFELKEEVLQIPYCKHVFHFECIHHWLQSNSTCPLCRCSIIPTTKFLNPAPPIN 167

Query: 179 RIDVLHPIDAASEQHRPLASPAQ 247
            I    P   A     PL  P Q
Sbjct: 168 IISSDPPQHGAIISDSPLQLPPQ 190