BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008493
         (720 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32131.3| unnamed protein product [Vitis vinifera]              166   3e-39
ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   166   3e-39
ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   159   5e-37
gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding re...   158   9e-37
ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   158   1e-36

>emb|CBI32131.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  166 bits (421), Expect = 3e-39
 Identities = 98/170 (57%), Positives = 105/170 (61%)
 Frame = -1

Query: 720 GKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXPDSEPXXXXXXXXXXXXXXRYAVTDMRK 541
           GK GR LR+EILKKIEKWQE            PDSEP              RYA+TDMRK
Sbjct: 354 GKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAITDMRK 413

Query: 540 LANRMQFGIPEESSXXXXXXXXXXXXXXXGSGKLRVSIGQSRLAAKVAXXXXXXXXXXXX 361
           LANRMQFG+PEESS               G+GKLRVS+GQS+LAAKVA            
Sbjct: 414 LANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKLAAKVAKKFKEKQYGSSG 473

Query: 360 XXXXXXXXXAFTPVQGIELSNPQALANQLGSGTQSTYFSEIGTFSKIKKT 211
                    AFTPVQGIELSNPQA ANQLGSGTQSTYFSEIGTFSKIK+T
Sbjct: 474 ATSGLTSSLAFTPVQGIELSNPQAHANQLGSGTQSTYFSEIGTFSKIKRT 523


>ref|XP_002263653.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like [Vitis
           vinifera]
          Length = 489

 Score =  166 bits (421), Expect = 3e-39
 Identities = 98/170 (57%), Positives = 105/170 (61%)
 Frame = -1

Query: 720 GKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXPDSEPXXXXXXXXXXXXXXRYAVTDMRK 541
           GK GR LR+EILKKIEKWQE            PDSEP              RYA+TDMRK
Sbjct: 320 GKTGRTLREEILKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAITDMRK 379

Query: 540 LANRMQFGIPEESSXXXXXXXXXXXXXXXGSGKLRVSIGQSRLAAKVAXXXXXXXXXXXX 361
           LANRMQFG+PEESS               G+GKLRVS+GQS+LAAKVA            
Sbjct: 380 LANRMQFGVPEESSLGDGLGEGYGMLGQAGNGKLRVSVGQSKLAAKVAKKFKEKQYGSSG 439

Query: 360 XXXXXXXXXAFTPVQGIELSNPQALANQLGSGTQSTYFSEIGTFSKIKKT 211
                    AFTPVQGIELSNPQA ANQLGSGTQSTYFSEIGTFSKIK+T
Sbjct: 440 ATSGLTSSLAFTPVQGIELSNPQAHANQLGSGTQSTYFSEIGTFSKIKRT 489


>ref|XP_003553898.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Glycine max]
          Length = 486

 Score =  159 bits (402), Expect = 5e-37
 Identities = 95/170 (55%), Positives = 102/170 (60%)
 Frame = -1

Query: 720 GKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXPDSEPXXXXXXXXXXXXXXRYAVTDMRK 541
           GK GR  +DEI KKIEKWQE            PDSEP              RYA+TDMRK
Sbjct: 317 GKTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAITDMRK 376

Query: 540 LANRMQFGIPEESSXXXXXXXXXXXXXXXGSGKLRVSIGQSRLAAKVAXXXXXXXXXXXX 361
           LANRMQFG+PEESS               GSGKLRVS+GQS+LAAKVA            
Sbjct: 377 LANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKVAKKFKEKNYGSSG 436

Query: 360 XXXXXXXXXAFTPVQGIELSNPQALANQLGSGTQSTYFSEIGTFSKIKKT 211
                    AFTPVQGIELSNPQA A+QLGSGTQSTYFSE GTFSKIK+T
Sbjct: 437 ATSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFSKIKRT 486


>gb|ABN06098.1| Pre-mRNA processing ribonucleoprotein, binding region; NOSIC
           [Medicago truncatula]
          Length = 484

 Score =  158 bits (400), Expect = 9e-37
 Identities = 96/169 (56%), Positives = 102/169 (60%)
 Frame = -1

Query: 720 GKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXPDSEPXXXXXXXXXXXXXXRYAVTDMRK 541
           GK GR+L+DEI KKIEKWQE            PDSEP              RYA+TDMRK
Sbjct: 315 GKTGRSLKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAITDMRK 374

Query: 540 LANRMQFGIPEESSXXXXXXXXXXXXXXXGSGKLRVSIGQSRLAAKVAXXXXXXXXXXXX 361
           LANRMQFGIPEESS               GSGKLRVS GQS+LAAKVA            
Sbjct: 375 LANRMQFGIPEESSLGDGLGEGYGMLGQAGSGKLRVSAGQSKLAAKVAKKFKEKSYGSSG 434

Query: 360 XXXXXXXXXAFTPVQGIELSNPQALANQLGSGTQSTYFSEIGTFSKIKK 214
                    AFTPVQGIELSNPQA A+QLGSGTQSTYFSE GTFSKI+K
Sbjct: 435 ATSGLTSSLAFTPVQGIELSNPQAHAHQLGSGTQSTYFSETGTFSKIQK 483


>ref|XP_003547677.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp31-like
           [Glycine max]
          Length = 486

 Score =  158 bits (399), Expect = 1e-36
 Identities = 94/170 (55%), Positives = 102/170 (60%)
 Frame = -1

Query: 720 GKNGRNLRDEILKKIEKWQEXXXXXXXXXXXXPDSEPXXXXXXXXXXXXXXRYAVTDMRK 541
           GK GR  +DEI KKIEKWQE            PDSEP              RYA+TDMRK
Sbjct: 317 GKTGRAFKDEIHKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRRLRKMKERYAITDMRK 376

Query: 540 LANRMQFGIPEESSXXXXXXXXXXXXXXXGSGKLRVSIGQSRLAAKVAXXXXXXXXXXXX 361
           LANRMQFG+PEESS               GSGKLRVS+GQS+LAAKVA            
Sbjct: 377 LANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVGQSKLAAKVAKKFKEKNYGSSG 436

Query: 360 XXXXXXXXXAFTPVQGIELSNPQALANQLGSGTQSTYFSEIGTFSKIKKT 211
                    AFTPVQGIEL+NPQA A+QLGSGTQSTYFSE GTFSKIK+T
Sbjct: 437 ATSGLTSSLAFTPVQGIELTNPQAHAHQLGSGTQSTYFSETGTFSKIKRT 486