BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008477
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200450.1| putative FBD-associated F-box protein [Arabidop...    58   2e-06
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...    57   4e-06
emb|CBI32674.3| unnamed protein product [Vitis vinifera]               57   4e-06
ref|XP_002871011.1| hypothetical protein ARALYDRAFT_908174 [Arab...    57   5e-06

>ref|NP_200450.1| putative FBD-associated F-box protein [Arabidopsis thaliana]
           gi|75262702|sp|Q9FM92.1|FBD22_ARATH RecName:
           Full=Putative FBD-associated F-box protein At5g56390
           gi|10177838|dbj|BAB11267.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009376|gb|AED96759.1|
           putative FBD-associated F-box protein [Arabidopsis
           thaliana]
          Length = 428

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 69/279 (24%), Positives = 120/279 (43%), Gaps = 12/279 (4%)
 Frame = -2

Query: 803 VNLQLPTMVGLPKLKCLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFKDMNVNCIVE 624
           V + + T V  P LK L++K  ++        L SSCP+LE+LV+  C   D NV  I+ 
Sbjct: 144 VLVDVSTPVSFPSLKRLRLKSVKYPGNEFVNNLISSCPVLEDLVVKQC--SDDNVT-ILT 200

Query: 623 ISSPSLKSFTVL----------HDRLVNSFYLPPVKI--YTSNLCNIRYYGNPPEICLET 480
           +  PSLK  +++          HD ++++  L  +KI  YT        YG+   +   T
Sbjct: 201 VRVPSLKRLSLIQRAELEIDVPHDFVIDTPSLEHLKIVDYT--------YGS--RVVKST 250

Query: 479 LSSLSNVDFEFTSPLDIYYTRASAILMGLQNVVRMVLRGFFIELLSRNEGSSARLPTSCF 300
           ++ +       T+ +D++  +   IL  L +  R+    F     S++      +  S  
Sbjct: 251 MNRI------ITASMDVFSPQTKEILGSLTSTKRL----FLCLPTSKDAYPVGNIFGSLI 300

Query: 299 SLEYLQLDVKPSKEQVQVVILLLRNYPNLKHLRISVKEPTRRLNLHELWXXXXXXXXXXX 120
            L     +     E + V+I +LR+ PNLK L+I      R  +    W           
Sbjct: 301 HLTICTCET----EWLNVLIRVLRDSPNLKTLKIEQYHNLRDEDPRPCWNETSLVPEY-- 354

Query: 119 XGSSMDILDHLKTVDIESFGGSKIELDLVRYLLKNANIL 3
                 +L  L+T +   + G+K E  +V ++L+ A+ L
Sbjct: 355 ------LLPSLETFEWVDYEGTKTEKQVVAFILRIASCL 387


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 78/283 (27%), Positives = 123/283 (43%), Gaps = 11/283 (3%)
 Frame = -2

Query: 818 LTLEYVNLQLPTMVGLPKLKCLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFKDMNV 639
           + + Y+ L+LP+ + L  LK L +    F D++ST QLFS  P L EL I  C + ++  
Sbjct: 156 INMPYI-LKLPSSISLSCLKILNLYEVIFTDDHSTQQLFS-LPNLVELEIHECNWMNL-- 211

Query: 638 NCIVEISSPSLKSFTVLHDRLVNSFYLPP------VKIYTSNLCNIRYYGN-PPEICLET 480
              V IS+P L+S  + H+   +S   P       V+I+ ++L +    G    + CL  
Sbjct: 212 -VAVSISAPKLQSLDI-HEPCQSS---PASLGGCHVRIFGTHLADFTIIGTLSNDYCLYE 266

Query: 479 LSSLSNVDFEFTS---PLDIYYTRASAILMGLQNVVRMVLRGFFIELLSRNEGSSARLPT 309
            S +      F++   P    Y RAS +L G+ +   + L    +++L  +       P 
Sbjct: 267 SSVVETCISIFSAADKPRQTAY-RASKLLEGISSAQSLCLTTNVVDVLD-DAPELLAFPL 324

Query: 308 SCFSLEYLQLDVKPSKEQVQVVILLLRNYPNLKHLRI-SVKEPTRRLNLHELWXXXXXXX 132
              +L  L  + + S         ++ N P+L  L+   V  P    N  E W       
Sbjct: 325 EFRNLTSLLFESEESNLHSDGFWHIIYNSPHLIALQFYGVSMPKVPSNCREDWTLDP--- 381

Query: 131 XXXXXGSSMDILDHLKTVDIESFGGSKIELDLVRYLLKNANIL 3
                 S    L  LK + +  FGG + ELD V +LLKNA  L
Sbjct: 382 ------SPPCFLSCLKFIQVGRFGGDEKELDAVGFLLKNATAL 418


>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
           F-box family-3 [Medicago truncatula]
          Length = 642

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 10/210 (4%)
 Frame = -2

Query: 797 LQLPTMVGLPKLKCLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFKDMNVNCIVEIS 618
           L +P+ +  P LK L +    F +ENS  QLFS CP+L+EL + NC ++ +N    + +S
Sbjct: 327 LHIPSGICFPILKTLVVTNVTFANENSAQQLFSGCPVLQELELDNCYWEHINQ---ISLS 383

Query: 617 SPSLKSFTVLHDRL-VNSFYLPPVKIYTSNLCNIRYYGNP-PEICLETLSSLSN--VDFE 450
             +L+  T+ +  L V+  ++  +KI   NL ++    NP  E+    L+SL +  +   
Sbjct: 384 ISTLRKLTISYLMLCVDYDHIMKLKIDAVNLLSLYCICNPIIEVIPVNLTSLVDAFIFLG 443

Query: 449 FTSPLDIYYTRASAI--LMGLQNVVRMVLRGF----FIELLSRNEGSSARLPTSCFSLEY 288
           +  P D  Y    +I  L GL +V  + L       F   L         LPT  ++L +
Sbjct: 444 YVYPHDEPYAAQCSIELLKGLGSVKSLKLNDIILMSFYHTLDNLHLHLLPLPT-FYNLTH 502

Query: 287 LQLDVKPSKEQVQVVILLLRNYPNLKHLRI 198
           L +          +V+ +LR  P L+ L I
Sbjct: 503 LYVCSVSPGNACALVMDILRKTPKLEDLTI 532


>emb|CBI32674.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 67/265 (25%), Positives = 111/265 (41%), Gaps = 10/265 (3%)
 Frame = -2

Query: 776 GLPKLKCLKIKFGRFFDENSTAQLFSSCPLLEELVISNCC-FKDMNVNCIVEISSPSLKS 600
           GL  LK L ++    F EN  + LFS+C LLE L + NC   + +N+      +   L+S
Sbjct: 159 GLSSLKSLHLRSVTLFAENLVSTLFSNCLLLENLKLENCSGLQSINIE-----AGNYLES 213

Query: 599 FTVLHDRLVNSFYLPPVKIYTSNLCNIRYYGNPPEICLETLSSLSNVDFEFTSPLDIYYT 420
           FTV      N   +  +K+   NL + +Y G  P I L+  S+L +V       L   YT
Sbjct: 214 FTV-----TNCPDMVNIKVSAPNLESFKYQGVLPLIQLKNTSNLIDVVLNLRDGLG--YT 266

Query: 419 RASA-----ILMGLQNVVRMVLRGFFIELLSRNEGSSARLPTSCFSLEYLQ-LDVKPSKE 258
                    +L  L+ V  + + G+ +E +        +L      L+ L+ +D   ++ 
Sbjct: 267 EFDCEELLYLLASLKEVEILTISGWLLEWMCSAGVIFGQLQFRFNKLKELRWIDSLMNRT 326

Query: 257 QVQVVILLLRNYPNLKHLRISVKEPTRRLN---LHELWXXXXXXXXXXXXGSSMDILDHL 87
           +   +   L + P+L+ L I + +    +     H  W              +   L  L
Sbjct: 327 KRDSLACFLNSTPSLEKLYIEIDQSLSSIPHPFFHHYWHEPHLWMDYKTVKCNASQLVVL 386

Query: 86  KTVDIESFGGSKIELDLVRYLLKNA 12
           K+V +  F   + EL L+  LLK A
Sbjct: 387 KSVRLVGFTNEEDELLLMDLLLKKA 411


>ref|XP_002871011.1| hypothetical protein ARALYDRAFT_908174 [Arabidopsis lyrata subsp.
           lyrata] gi|297316848|gb|EFH47270.1| hypothetical protein
           ARALYDRAFT_908174 [Arabidopsis lyrata subsp. lyrata]
          Length = 415

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 57/220 (25%), Positives = 99/220 (45%), Gaps = 11/220 (5%)
 Frame = -2

Query: 818 LTLEYVNLQLPTMVGLPKLKCLKIKFGRFFDENSTAQLFSSCPLLEELVISNCCFKDMNV 639
           L L Y NL    +V    L+ L +   +  D  S A++ S C LLE L + N C +  ++
Sbjct: 134 LNLGYSNLIPKCVVSWSSLRTLSLNRCKMSD-GSFAKILSGCLLLESLTL-NLCDRLYHL 191

Query: 638 NCIVEISSPSLKSFTVLHDRLVNSFYLPPVKIYTSNLCNIRYYGNPPEICLETLSSLSNV 459
           +      S SL+   V  DR + +    P +I   ++  +R         L  +SSL+  
Sbjct: 192 DLS---KSLSLRRLEVYGDRWIEA----PARIVAPHIHYLRLENYQRPSNLVDVSSLTEA 244

Query: 458 DFEFTSPLDIYYT-----------RASAILMGLQNVVRMVLRGFFIELLSRNEGSSARLP 312
           +   +  LD Y+T               IL+ LQNV ++ + G F+++LS  E      P
Sbjct: 245 NLNLSYVLD-YFTCEIVEAELLQFMVREILVKLQNVKKLTIGGIFLQILSLAELRGVTFP 303

Query: 311 TSCFSLEYLQLDVKPSKEQVQVVILLLRNYPNLKHLRISV 192
              F++E L ++ +  +  +  +  LL+N P LK + + +
Sbjct: 304 K--FNIEALTVETRIDQSMIPGLARLLQNSPGLKRITVYI 341