BLASTX nr result

ID: Coptis23_contig00008475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008475
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146111.1| PREDICTED: secretory carrier-associated memb...   466   e-129
ref|NP_001241214.1| uncharacterized protein LOC100780723 [Glycin...   463   e-128
ref|NP_001241252.1| uncharacterized protein LOC100806586 [Glycin...   459   e-127
ref|XP_003612685.1| Secretory carrier-associated membrane protei...   452   e-124
gb|AFK41920.1| unknown [Lotus japonicus]                              449   e-124

>ref|XP_004146111.1| PREDICTED: secretory carrier-associated membrane protein 4-like
            [Cucumis sativus]
          Length = 269

 Score =  466 bits (1199), Expect = e-129
 Identities = 220/271 (81%), Positives = 244/271 (90%)
 Frame = -2

Query: 1036 MNRRNDPNPFDEDEGVNPFXXXXXXXXXXSRIPQIVSETLGFGNKHDATVDIPLDTMNKG 857
            MNR NDPNPFDE EGVNPF           RIPQ+VSETLGFG KHDATVDIPLDTMN  
Sbjct: 1    MNRHNDPNPFDE-EGVNPFSKGGGAPGSKFRIPQMVSETLGFGQKHDATVDIPLDTMNDP 59

Query: 856  SQPKEKELASWEAELKRREQEIKRREDAVSRAGVPVDDKNWPPFFPIIHHDITNEIPIHA 677
             + KE+ELA+WEAEL R+E+EIK+RE+AVS+AGVP DD+NWPPFFPIIHHDI NEIP+HA
Sbjct: 60   KK-KERELAAWEAELSRKEKEIKKREEAVSKAGVPADDRNWPPFFPIIHHDIANEIPVHA 118

Query: 676  QRLQYMAFASWLGIVLCLTFNIIAVTVCWIKGGGVKIFFLAIIYALLGVPLSYVLWYRPL 497
            Q+LQY+AFASWLGIVLCL FN+IA+TVCWI+GGGVKIFFLA+IYA+LG+PLSYVLWYRPL
Sbjct: 119  QKLQYLAFASWLGIVLCLVFNVIAITVCWIRGGGVKIFFLAVIYAILGIPLSYVLWYRPL 178

Query: 496  YRAMRTDSALKFSWFFLCYLLHIGFCIFAAIAPPIVFRGKSLTGILAAIDVFSDHVLVGI 317
            YRAMRTDSALKF WFF+ YLLHI FCIFAAIAPP+VF G+SLTGILAAIDVFS+HVLVGI
Sbjct: 179  YRAMRTDSALKFGWFFMFYLLHIAFCIFAAIAPPVVFHGQSLTGILAAIDVFSEHVLVGI 238

Query: 316  FYLIGFGLFCLESLLSLWVLQKIYMYFRGNK 224
            FYLIGFG FCLESLLSLWVLQKIY+YFRGNK
Sbjct: 239  FYLIGFGFFCLESLLSLWVLQKIYLYFRGNK 269


>ref|NP_001241214.1| uncharacterized protein LOC100780723 [Glycine max]
            gi|255641378|gb|ACU20966.1| unknown [Glycine max]
          Length = 269

 Score =  463 bits (1192), Expect = e-128
 Identities = 223/271 (82%), Positives = 245/271 (90%)
 Frame = -2

Query: 1036 MNRRNDPNPFDEDEGVNPFXXXXXXXXXXSRIPQIVSETLGFGNKHDATVDIPLDTMNKG 857
            MNR +DPNPF+E+E VNPF          SRIP + SE+LGFG +HDATVDIPLDT N  
Sbjct: 1    MNRHHDPNPFEEEE-VNPFSNGTTAPASKSRIPPLASESLGFGQRHDATVDIPLDTTND- 58

Query: 856  SQPKEKELASWEAELKRREQEIKRREDAVSRAGVPVDDKNWPPFFPIIHHDITNEIPIHA 677
            S+ K +ELA+WEA+LKRRE+EIKRRE+AVSRAGVPVDDKNWPPFFPIIHHDI NEIP+HA
Sbjct: 59   SKKKGQELAAWEADLKRREKEIKRREEAVSRAGVPVDDKNWPPFFPIIHHDIANEIPVHA 118

Query: 676  QRLQYMAFASWLGIVLCLTFNIIAVTVCWIKGGGVKIFFLAIIYALLGVPLSYVLWYRPL 497
            QRLQY+AFASWLGIVLCL FN++AVTVCWI+GGGVKIFFLA+IYALLGVPLSYVLWYRPL
Sbjct: 119  QRLQYLAFASWLGIVLCLGFNVVAVTVCWIRGGGVKIFFLAVIYALLGVPLSYVLWYRPL 178

Query: 496  YRAMRTDSALKFSWFFLCYLLHIGFCIFAAIAPPIVFRGKSLTGILAAIDVFSDHVLVGI 317
            YRAMRTDSALKF WFF+ YLLHIGFCIFAAIAPPIVF GKSLTGILAAIDVFSDHVLVGI
Sbjct: 179  YRAMRTDSALKFGWFFMLYLLHIGFCIFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGI 238

Query: 316  FYLIGFGLFCLESLLSLWVLQKIYMYFRGNK 224
            FYLIGFG+FCLE+LLS WVLQKIYMYFRG+K
Sbjct: 239  FYLIGFGMFCLEALLSFWVLQKIYMYFRGHK 269


>ref|NP_001241252.1| uncharacterized protein LOC100806586 [Glycine max]
            gi|255638153|gb|ACU19390.1| unknown [Glycine max]
          Length = 269

 Score =  459 bits (1181), Expect = e-127
 Identities = 220/271 (81%), Positives = 243/271 (89%)
 Frame = -2

Query: 1036 MNRRNDPNPFDEDEGVNPFXXXXXXXXXXSRIPQIVSETLGFGNKHDATVDIPLDTMNKG 857
            MNR NDPNPF+E+E VNPF          SRIP + S+ LGFG +HDATVDIPLDT N  
Sbjct: 1    MNRHNDPNPFEEEE-VNPFSNGGAAPASKSRIPPLASQPLGFGQRHDATVDIPLDTTND- 58

Query: 856  SQPKEKELASWEAELKRREQEIKRREDAVSRAGVPVDDKNWPPFFPIIHHDITNEIPIHA 677
            S+ + +ELA+WEA+LKR+E+EIKRRE+AVSRAGVPVDDKNWPP FPIIHHDI NEIP+HA
Sbjct: 59   SKKRGQELAAWEADLKRKEKEIKRREEAVSRAGVPVDDKNWPPIFPIIHHDIANEIPVHA 118

Query: 676  QRLQYMAFASWLGIVLCLTFNIIAVTVCWIKGGGVKIFFLAIIYALLGVPLSYVLWYRPL 497
            QRLQY+AFASWLGIVLCL FN++AVTVCWI+GGGVKIFFLA+IY LLGVPLSYVLWYRPL
Sbjct: 119  QRLQYLAFASWLGIVLCLVFNVVAVTVCWIRGGGVKIFFLAVIYGLLGVPLSYVLWYRPL 178

Query: 496  YRAMRTDSALKFSWFFLCYLLHIGFCIFAAIAPPIVFRGKSLTGILAAIDVFSDHVLVGI 317
            YRAMRTDSALKF WFF+ YLLHIGFCIFAAIAPPIVF GKSLTGILAAIDVFSDHVLVGI
Sbjct: 179  YRAMRTDSALKFGWFFMFYLLHIGFCIFAAIAPPIVFHGKSLTGILAAIDVFSDHVLVGI 238

Query: 316  FYLIGFGLFCLESLLSLWVLQKIYMYFRGNK 224
            FYLIGFG+FCLE+LLSLWVLQKIYMYFRG+K
Sbjct: 239  FYLIGFGMFCLEALLSLWVLQKIYMYFRGHK 269


>ref|XP_003612685.1| Secretory carrier-associated membrane protein [Medicago truncatula]
            gi|355514020|gb|AES95643.1| Secretory carrier-associated
            membrane protein [Medicago truncatula]
          Length = 267

 Score =  452 bits (1162), Expect = e-124
 Identities = 213/271 (78%), Positives = 241/271 (88%)
 Frame = -2

Query: 1036 MNRRNDPNPFDEDEGVNPFXXXXXXXXXXSRIPQIVSETLGFGNKHDATVDIPLDTMNKG 857
            MNR +DPNPF+E+E VNPF           R+P + SE LGFG +HDATVDIPL+T N  
Sbjct: 1    MNRNHDPNPFEEEE-VNPFSNGTGSKS---RVPSVASEPLGFGQRHDATVDIPLETSNGD 56

Query: 856  SQPKEKELASWEAELKRREQEIKRREDAVSRAGVPVDDKNWPPFFPIIHHDITNEIPIHA 677
            S+ K +ELA WEA+LKRRE++IKRRED+V++AGVPVDDKNWPPFFPIIHHDI NEIP+HA
Sbjct: 57   SKKKSQELAVWEADLKRREKDIKRREDSVAKAGVPVDDKNWPPFFPIIHHDIANEIPVHA 116

Query: 676  QRLQYMAFASWLGIVLCLTFNIIAVTVCWIKGGGVKIFFLAIIYALLGVPLSYVLWYRPL 497
            QRLQY AFASWLGIVLCL FN++AV VCWI+GGGVKIFFLA+IYALLG+PLSYVLWYRPL
Sbjct: 117  QRLQYSAFASWLGIVLCLVFNVVAVIVCWIRGGGVKIFFLAVIYALLGIPLSYVLWYRPL 176

Query: 496  YRAMRTDSALKFSWFFLCYLLHIGFCIFAAIAPPIVFRGKSLTGILAAIDVFSDHVLVGI 317
            YRAMRTDSALKFSWFF+ YLLHI FCIFAAIAPP+VF GKSLTGILAAIDVFSDHVLVGI
Sbjct: 177  YRAMRTDSALKFSWFFMFYLLHIAFCIFAAIAPPVVFHGKSLTGILAAIDVFSDHVLVGI 236

Query: 316  FYLIGFGLFCLESLLSLWVLQKIYMYFRGNK 224
            FYLIGFGLFCLE+LLSLWV+Q+IYM+FRG+K
Sbjct: 237  FYLIGFGLFCLEALLSLWVIQRIYMFFRGHK 267


>gb|AFK41920.1| unknown [Lotus japonicus]
          Length = 268

 Score =  449 bits (1155), Expect = e-124
 Identities = 217/273 (79%), Positives = 241/273 (88%), Gaps = 2/273 (0%)
 Frame = -2

Query: 1036 MNRRNDPNPFDEDEGVNPFXXXXXXXXXXSRIPQIVSETLGFGNKHDATVDIPLDTMNKG 857
            MNR +DPNPFDEDE VNPF           RIP + SE LGFG +HDATVDIPLDT N  
Sbjct: 1    MNRHHDPNPFDEDE-VNPFSNGAAPGSKS-RIPPLASEPLGFGQRHDATVDIPLDTTN-- 56

Query: 856  SQPKEK--ELASWEAELKRREQEIKRREDAVSRAGVPVDDKNWPPFFPIIHHDITNEIPI 683
             +PK+K  ELA+WEA+LKRRE+++KRREDAVSRAGVPVDDKNWPP FPIIHHDI NEIP+
Sbjct: 57   -EPKKKGQELAAWEADLKRREKDLKRREDAVSRAGVPVDDKNWPPIFPIIHHDIANEIPV 115

Query: 682  HAQRLQYMAFASWLGIVLCLTFNIIAVTVCWIKGGGVKIFFLAIIYALLGVPLSYVLWYR 503
            HAQRLQY+AFASWLGIVLCL FN++AV VCWI+GGGVKIFFLA+IYALLGVPLS+VLWYR
Sbjct: 116  HAQRLQYLAFASWLGIVLCLVFNVVAVMVCWIRGGGVKIFFLAVIYALLGVPLSHVLWYR 175

Query: 502  PLYRAMRTDSALKFSWFFLCYLLHIGFCIFAAIAPPIVFRGKSLTGILAAIDVFSDHVLV 323
            PLYRAMRTDSALKF WFF+ YLLHI FCIFAAIAPP+VF GKSLTGILAA DVFSDHVLV
Sbjct: 176  PLYRAMRTDSALKFGWFFMFYLLHIAFCIFAAIAPPVVFHGKSLTGILAATDVFSDHVLV 235

Query: 322  GIFYLIGFGLFCLESLLSLWVLQKIYMYFRGNK 224
            GIFYL+GFGLFCLESLLSLWV+QKIY++FRG+K
Sbjct: 236  GIFYLVGFGLFCLESLLSLWVIQKIYLFFRGHK 268


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