BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008471
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...   181   4e-44
emb|CBI20737.3| unnamed protein product [Vitis vinifera]              181   4e-44
ref|XP_002516159.1| pentatricopeptide repeat-containing protein,...   172   2e-41
ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]      165   4e-39

>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
           [Vitis vinifera]
          Length = 1580

 Score =  181 bits (460), Expect = 4e-44
 Identities = 92/140 (65%), Positives = 102/140 (72%)
 Frame = +1

Query: 4   KYAGDNLQQSTSPYRSVDKDNLFFFKTGSSAQPRGAANFASAVKKFTPQDSGQSKFERYX 183
           KYAGD++QQ  +PYRS DKDNL  FK+ SS   RGA +FASAV+K   QDSG  KF+R  
Sbjct: 300 KYAGDDIQQGVNPYRSSDKDNLLMFKSNSSIPSRGATDFASAVRKLATQDSGIWKFDRNG 359

Query: 184 XXXXXXXXXXXXQILASSYGSGQGRSTYGDRSQNYGSPRGAPVWVETGEAVANMYSELRE 363
                        +LASSY SG GR TYGDR QN GS R AP WVETGEAVANMYSELRE
Sbjct: 360 TADVNVGSSRSSHVLASSYNSGHGRGTYGDRLQNRGSARVAPAWVETGEAVANMYSELRE 419

Query: 364 EARDHARVRNAYFEQARQAY 423
           EARDHAR+RNAYFEQA+QAY
Sbjct: 420 EARDHARLRNAYFEQAQQAY 439


>emb|CBI20737.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score =  181 bits (460), Expect = 4e-44
 Identities = 92/140 (65%), Positives = 102/140 (72%)
 Frame = +1

Query: 4   KYAGDNLQQSTSPYRSVDKDNLFFFKTGSSAQPRGAANFASAVKKFTPQDSGQSKFERYX 183
           KYAGD++QQ  +PYRS DKDNL  FK+ SS   RGA +FASAV+K   QDSG  KF+R  
Sbjct: 249 KYAGDDIQQGVNPYRSSDKDNLLMFKSNSSIPSRGATDFASAVRKLATQDSGIWKFDRNG 308

Query: 184 XXXXXXXXXXXXQILASSYGSGQGRSTYGDRSQNYGSPRGAPVWVETGEAVANMYSELRE 363
                        +LASSY SG GR TYGDR QN GS R AP WVETGEAVANMYSELRE
Sbjct: 309 TADVNVGSSRSSHVLASSYNSGHGRGTYGDRLQNRGSARVAPAWVETGEAVANMYSELRE 368

Query: 364 EARDHARVRNAYFEQARQAY 423
           EARDHAR+RNAYFEQA+QAY
Sbjct: 369 EARDHARLRNAYFEQAQQAY 388


>ref|XP_002516159.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544645|gb|EEF46161.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 1439

 Score =  172 bits (437), Expect = 2e-41
 Identities = 88/141 (62%), Positives = 103/141 (73%), Gaps = 1/141 (0%)
 Frame = +1

Query: 4   KYAGDNLQQSTSPYRSVDKDNLFFFKTGSSAQPRGAA-NFASAVKKFTPQDSGQSKFERY 180
           KY+GD++QQS +PYRS DK+N+  FK+ SS   RG A +FASAV+K   QDSG  K+ER 
Sbjct: 307 KYSGDDIQQSGNPYRSSDKENILLFKSSSSTPSRGGAIDFASAVRKLASQDSGIWKYERN 366

Query: 181 XXXXXXXXXXXXXQILASSYGSGQGRSTYGDRSQNYGSPRGAPVWVETGEAVANMYSELR 360
                         +LASSY SG GR  Y +R+QN GS R APVW+ETGEAVANMYSELR
Sbjct: 367 GSADSAVGSSRSSHVLASSYSSGNGRGIYSERAQNRGSARAAPVWLETGEAVANMYSELR 426

Query: 361 EEARDHARVRNAYFEQARQAY 423
           EEARDHAR+RNAYFEQARQAY
Sbjct: 427 EEARDHARLRNAYFEQARQAY 447


>ref|XP_002309456.1| predicted protein [Populus trichocarpa] gi|222855432|gb|EEE92979.1|
           predicted protein [Populus trichocarpa]
          Length = 581

 Score =  166 bits (420), Expect = 2e-39
 Identities = 83/140 (59%), Positives = 97/140 (69%)
 Frame = +1

Query: 4   KYAGDNLQQSTSPYRSVDKDNLFFFKTGSSAQPRGAANFASAVKKFTPQDSGQSKFERYX 183
           KY GD+LQQ++ PYRS +KDN+  FK G S   RGA +FASAV+K   QDS   K +R  
Sbjct: 305 KYTGDDLQQASVPYRSSNKDNMLLFKPGGSFSSRGAVDFASAVRKLASQDSSMWKHDRNG 364

Query: 184 XXXXXXXXXXXXQILASSYGSGQGRSTYGDRSQNYGSPRGAPVWVETGEAVANMYSELRE 363
                        +L S+YG G GR  Y DR Q+ GS R APVW+ETGEAVANMYSE+RE
Sbjct: 365 SADSTVGSSRSSHVLPSAYGGGHGRGIYADRLQSRGSGRQAPVWLETGEAVANMYSEMRE 424

Query: 364 EARDHARVRNAYFEQARQAY 423
           EARDHAR+RNAYFEQARQAY
Sbjct: 425 EARDHARLRNAYFEQARQAY 444


>gb|ABK96374.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 581

 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/140 (59%), Positives = 96/140 (68%)
 Frame = +1

Query: 4   KYAGDNLQQSTSPYRSVDKDNLFFFKTGSSAQPRGAANFASAVKKFTPQDSGQSKFERYX 183
           KY GD+LQQ++ PYRS +KDN   FK G S   RGA +FASAV+K   QDS   K +R  
Sbjct: 305 KYTGDDLQQASVPYRSSNKDNTLLFKPGGSFSSRGAVDFASAVRKLASQDSSMWKHDRNG 364

Query: 184 XXXXXXXXXXXXQILASSYGSGQGRSTYGDRSQNYGSPRGAPVWVETGEAVANMYSELRE 363
                        +L S+YG G GR  Y DR Q+ GS R APVW+ETGEAVANMYSE+RE
Sbjct: 365 SADSTVGSSRSSHVLPSAYGGGHGRGIYADRLQSRGSGRQAPVWLETGEAVANMYSEMRE 424

Query: 364 EARDHARVRNAYFEQARQAY 423
           EARDHAR+RNAYFEQARQAY
Sbjct: 425 EARDHARLRNAYFEQARQAY 444