BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00008468
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis...    91   1e-16
ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
emb|CBI26799.3| unnamed protein product [Vitis vinifera]               88   6e-16
ref|XP_003631008.1| THO complex subunit [Medicago truncatula] gi...    87   2e-15

>ref|XP_002325475.1| predicted protein [Populus trichocarpa] gi|222862350|gb|EEE99856.1|
            predicted protein [Populus trichocarpa]
          Length = 1836

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 53/112 (47%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
 Frame = +1

Query: 4    ERPDKSSAEDIVSQRFRDSSIDRYGRGRSVERVQDRGTDKSFDRV-------------NX 144
            ERPDKS  +D ++ R RD S++RYGR RS ER  DRGTD+SFDR+             N 
Sbjct: 1552 ERPDKSHGDDSLADRSRDKSMERYGRERSDERGMDRGTDRSFDRLADKAKDDRSKLRYND 1611

Query: 145  XXXXXXXXXXXFHRQSXXXXXXXXXHMVPQSVNPNRREEDADRRVGNTRHAQ 300
                       FH Q+         HMVPQSV   RR+EDADRR G TRHAQ
Sbjct: 1612 TSAEKSQGDDRFHGQNLPPPPPLPPHMVPQSVTSGRRDEDADRRFGTTRHAQ 1663


>ref|XP_002281541.2| PREDICTED: THO complex subunit 2-like [Vitis vinifera]
          Length = 1849

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 49/118 (41%), Positives = 67/118 (56%), Gaps = 18/118 (15%)
 Frame = +1

Query: 1    LERPDKSSAEDIVSQRFRDSSIDRYGRGRSVERVQDRGTDKSFDRV-------------- 138
            LERPDKS  +++++++ RD S++R+GR RSVERVQ+R +++SFDR+              
Sbjct: 1571 LERPDKSRGDEMIAEKSRDRSMERHGRERSVERVQERSSERSFDRLTDKVKDERNKDDRG 1630

Query: 139  ----NXXXXXXXXXXXXFHRQSXXXXXXXXXHMVPQSVNPNRREEDADRRVGNTRHAQ 300
                +            FH QS         HMVPQSV  +RR+EDADRR G  RHAQ
Sbjct: 1631 KMRYSETSVEKSHADDRFHGQSLPPPPPLPPHMVPQSVTASRRDEDADRRFGTARHAQ 1688


>ref|XP_002328963.1| predicted protein [Populus trichocarpa] gi|222839197|gb|EEE77548.1|
            predicted protein [Populus trichocarpa]
          Length = 1805

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 51/112 (45%), Positives = 60/112 (53%), Gaps = 13/112 (11%)
 Frame = +1

Query: 4    ERPDKSSAEDIVSQRFRDSSIDRYGRGRSVERVQDRGTDKSFDRV-------------NX 144
            ERPDKS  +D ++ R RD S++RYGR  SVER QDR  D+SFDR+             N 
Sbjct: 1521 ERPDKSRGDDSLADRSRDKSMERYGRELSVERGQDRVADRSFDRLADKAKDDRSKLRYND 1580

Query: 145  XXXXXXXXXXXFHRQSXXXXXXXXXHMVPQSVNPNRREEDADRRVGNTRHAQ 300
                       FH Q+         HMVPQSV   RR+EDADRR G TRH Q
Sbjct: 1581 TSAEKSQVDDRFHGQNLPPPPPLPPHMVPQSVTSGRRDEDADRRFGTTRHVQ 1632


>emb|CBI26799.3| unnamed protein product [Vitis vinifera]
          Length = 1767

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 45/100 (45%), Positives = 62/100 (62%)
 Frame = +1

Query: 1    LERPDKSSAEDIVSQRFRDSSIDRYGRGRSVERVQDRGTDKSFDRVNXXXXXXXXXXXXF 180
            LERPDKS  +++++++ RD S++R+GR RSVERVQ+R +++     +            F
Sbjct: 1512 LERPDKSRGDEMIAEKSRDRSMERHGRERSVERVQERSSERKKSHAD----------DRF 1561

Query: 181  HRQSXXXXXXXXXHMVPQSVNPNRREEDADRRVGNTRHAQ 300
            H QS         HMVPQSV  +RR+EDADRR G  RHAQ
Sbjct: 1562 HGQSLPPPPPLPPHMVPQSVTASRRDEDADRRFGTARHAQ 1601


>ref|XP_003631008.1| THO complex subunit [Medicago truncatula] gi|355525030|gb|AET05484.1|
            THO complex subunit [Medicago truncatula]
          Length = 2048

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 50/118 (42%), Positives = 65/118 (55%), Gaps = 18/118 (15%)
 Frame = +1

Query: 1    LERPDKSSAEDIVSQRFRDSSIDRYGRGRSVERVQDRGTDKSFDRV-------------- 138
            L+R DKS  +D V ++ RD SI+RYGR RSVERVQ+RG+++SF+R+              
Sbjct: 1774 LDRLDKSRGDDFVVEKPRDRSIERYGRERSVERVQERGSERSFNRLPDKAKDDRSKDDRN 1833

Query: 139  ----NXXXXXXXXXXXXFHRQSXXXXXXXXXHMVPQSVNPNRREEDADRRVGNTRHAQ 300
                N            FH QS         +MVPQS+   RR+EDADRR G TRH+Q
Sbjct: 1834 KLRYNDATIEKSHAEGRFHGQSLPPPPPLPPNMVPQSLGAGRRDEDADRRYGATRHSQ 1891